MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-214C11
Chromosome	9 (Build37)
Map Location	100,126,639 - 100,305,683
singlet/doublet	doublet
Overlap gene	LOC100040590
Upstream gene	EG623459, Cep70, D9Ertd280e, Mras, LOC623534, Armc8, Dbr1, A4gnt, Dzip1l, Cldn18, EG667429, Sox14, LOC667456, 4930519F24Rik
Downstream gene	Il20rb, Nck1, LOC633385, Tmem22, LOC667486, Stag1, LOC100040990, Pccb, LOC100041013, LOC100040707, Msl2l1, 3222402P14Rik, LOC100041065
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG623459 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:623459 MGI:3647754
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 9 Proteins

name	Cep70 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68121 MGI:1915371
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D9Ertd280e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:272636 MGI:1098699
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mras (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17532 MGI:1100856
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC623534 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623534
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Armc8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74125 MGI:1921375
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dbr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83703 MGI:1931520
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A4gnt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:333424 MGI:2143261
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dzip1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72507 MGI:1919757
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cldn18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56492 MGI:1929209
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG667429 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667429 MGI:3644692
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein pseudo : _no_value

name	Sox14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20669 MGI:98362
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 49 Proteins

name	LOC667456 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667456
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 51 ESTs pseudo : _no_value

name	4930519F24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108970 MGI:1922047
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040590 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040590
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Il20rb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:213208 MGI:2143266
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Nck1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17973 MGI:109601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC633385 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:633385
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Tmem22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245020 MGI:2685365
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins

name	LOC667486 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667486
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 Proteins pseudo : _no_value

name	Stag1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20842 MGI:1098658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040990 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040990
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein pseudo : _no_value

name	Pccb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66904 MGI:1914154
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041013 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041013
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC100040707 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040707
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Msl2l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77853 MGI:1925103
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 180 ESTs, 3 Proteins

name	3222402P14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235542 MGI:2442104
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 218 ESTs, 9 Proteins

name	LOC100041065 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041065
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 Proteins pseudo : _no_value

name	EG623459 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386339 GeneID:623459 MGI:3647754
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 9 Proteins product : predicted gene, EG623459 transcript_id : XM_887913.2

name	Cep70 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117606315 GeneID:68121 MGI:1915371
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centrosomal protein 70 transcript_id : NM_023873.3

name	D9Ertd280e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119433660 GeneID:272636 MGI:1098699
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 9, ERATO Doi 280, expressed transcript_id : NM_177775.3

name	Mras (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982419 GeneID:17532 MGI:1100856
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : muscle and microspikes RAS transcript_id : NM_008624.2

name	LOC623534 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260175 GeneID:623534
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to thioredoxin-like 2 transcript_id : XM_888010.3

name	Armc8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348917 GeneID:74125 MGI:1921375
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : armadillo repeat containing 8 transcript_id : NM_028768.2

name	Dbr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377002 GeneID:83703 MGI:1931520
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : debranching enzyme homolog 1 (S. cerevisiae) transcript_id : NM_031403.3

name	A4gnt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116734844 GeneID:333424 MGI:2143261
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alpha-1,4-N-acetylglucosaminyltransferase transcript_id : NM_001077424.1

name	Dzip1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130444 GeneID:72507 MGI:1919757
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DAZ interacting protein 1-like transcript_id : NM_028258.3

name	Cldn18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130563 GeneID:56492 MGI:1929209
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : claudin 18 transcript_id : NM_019815.2

name	Sox14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260177 GeneID:20669 MGI:98362
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 5 ESTs, 49 Proteins product : SRY-box containing gene 14 transcript_id : XM_284529.7

name	4930519F24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386346 GeneID:108970 MGI:1922047
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930519F24 gene, transcript variant 2 transcript_id : XM_897583.2

name	Il20rb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370392 GeneID:213208 MGI:2143266
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 20 receptor beta transcript_id : NM_001033543.2

name	Il20rb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82524393 GeneID:213208 MGI:2143266
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 20 receptor beta transcript_id : NM_001037246.1

name	Nck1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328186 GeneID:17973 MGI:109601
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : non-catalytic region of tyrosine kinase adaptor protein 1 transcript_id : NM_010878.2

name	LOC633385 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260185 GeneID:633385
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical LOC633385 transcript_id : XM_001475636.1

name	Tmem22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260187 GeneID:245020 MGI:2685365
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins product : transmembrane protein 22 transcript_id : XM_147067.6

name	Stag1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130461 GeneID:20842 MGI:1098658
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stromal antigen 1 transcript_id : NM_009282.3

name	Pccb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348575 GeneID:66904 MGI:1914154
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : propionyl Coenzyme A carboxylase, beta polypeptide transcript_id : NM_025835.2

name	Msl2l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386513 GeneID:77853 MGI:1925103
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 180 ESTs, 3 Proteins product : male-specific lethal 2-like 1 (Drosophila) transcript_id : XM_150227.8

name	3222402P14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260298 GeneID:235542 MGI:2442104
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 202 ESTs, 7 Proteins product : RIKEN cDNA 3222402P14 gene transcript_id : XM_001475836.1

name	EG623459 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82930662 GeneID:623459 MGI:3647754
definition	codon_start : 1 product : similar to Fas apoptotic inhibitory molecule protein_id : XP_893006.1

name	Cep70 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117606316 GeneID:68121 MGI:1915371
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : p10-binding protein protein_id : NP_076362.2

name	D9Ertd280e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119433661 GeneID:272636 MGI:1098699
definition	codon_start : 1 product : chr3 synaptotagmin protein_id : NP_808443.2

name	Mras (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678930 CCDS:CCDS23433.1 GeneID:17532 MGI:1100856
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 function : GTPase product : muscle and microspikes RAS protein_id : NP_032650.1

name	LOC623534 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260176 GeneID:623534
definition	codon_start : 1 product : hypothetical protein protein_id : XP_893103.3

name	Armc8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229175 CCDS:CCDS23434.1 GeneID:74125 MGI:1921375
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : armadillo repeat containing 8 protein_id : NP_083044.1

name	Dbr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50399860 CCDS:CCDS23435.1 GeneID:83703 MGI:1931520
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008419 - RNA lariat debranching enzyme activity [Evidence IDA] GO_process : GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IDA] codon_start : 1 product : debranching enzyme homolog 1 protein_id : NP_113580.2

name	A4gnt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116734845 GeneID:333424 MGI:2143261
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005795 - Golgi stack [Evidence IEA] GO_function : GO:0008375 - acetylglucosaminyltransferase activity [Evidence ISS]; GO:0008378 - galactosyltransferase activity [Evidence IEA] GO_process : GO:0009101 - glycoprotein biosynthesis [Evidence ISS] codon_start : 1 product : alpha-1,4-N-acetylglucosaminyltransferase protein_id : NP_001070892.1

name	Dzip1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71896653 CCDS:CCDS23436.1 GeneID:72507 MGI:1919757
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] [Evidence ISS]; GO:0043234 - protein complex [Evidence ISS] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007281 - germ cell development [Evidence ISS] codon_start : 1 product : DAZ interacting protein 1-like protein_id : NP_082534.2

name	Cldn18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790075 CCDS:CCDS23437.1 GeneID:56492 MGI:1929209
definition	GO_component : GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005923 - tight junction [Evidence ISS] [Evidence IEA] GO_function : GO:0042802 - identical protein binding [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence ISS] codon_start : 1 note : Claudin-18 product : claudin 18 protein_id : NP_062789.1

name	Sox14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260178 GeneID:20669 MGI:98362
definition	codon_start : 1 product : SRY-box 14 protein_id : XP_284529.4

name	4930519F24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82930608 GeneID:108970 MGI:1922047
definition	codon_start : 1 product : hypothetical protein LOC108970 isoform 2 protein_id : XP_902676.1

name	Il20rb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702053 CCDS:CCDS23438.1 GeneID:213208 MGI:2143266
definition	codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2; fibronectin type III domain containing 6 product : fibronectin type III domain containing 6 isoform 2 protein_id : NP_001028715.1

name	Il20rb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82524394 CCDS:CCDS23439.1 GeneID:213208 MGI:2143266
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1; fibronectin type III domain containing 6 product : fibronectin type III domain containing 6 isoform 1 protein_id : NP_001032323.1

name	Nck1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328187 CCDS:CCDS23440.1 GeneID:17973 MGI:109601
definition	GO_component : GO:0012506 - vesicle membrane [Evidence IDA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007015 - actin filament organization [Evidence IMP]; GO:0016477 - cell migration [Evidence IMP]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0030032 - lamellipodium biogenesis [Evidence IMP] codon_start : 1 product : non-catalytic region of tyrosine kinase adaptor protein 1 protein_id : NP_035008.2

name	LOC633385 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260186 GeneID:633385
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475686.1

name	Tmem22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260188 GeneID:245020 MGI:2685365
definition	codon_start : 1 product : similar to Transmembrane protein 22 protein_id : XP_147067.5

name	Stag1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254610 CCDS:CCDS23441.1 GeneID:20842 MGI:1098658
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]; GO:0007126 - meiosis [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA] codon_start : 1 product : stromal antigen 1 protein_id : NP_033308.2

name	Pccb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385310 CCDS:CCDS23442.1 GeneID:66904 MGI:1914154
definition	GO_component : GO:0009317 - acetyl-CoA carboxylase complex [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003989 - acetyl-CoA carboxylase activity [Evidence IEA]; GO:0004658 - propionyl-CoA carboxylase activity [Evidence ISS] [Evidence IEA] GO_process : GO:0006633 - fatty acid biosynthesis [Evidence IEA] codon_start : 1 product : propionyl Coenzyme A carboxylase, beta polypeptide protein_id : NP_080111.1

name	Msl2l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94386514 GeneID:77853 MGI:1925103
definition	codon_start : 1 product : ring finger protein 184 protein_id : XP_150227.6

name	3222402P14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260299 GeneID:235542 MGI:2442104
definition	codon_start : 1 product : alpha isoform of regulatory subunit B'', protein phosphatase 2 protein_id : XP_001475886.1

name	LOC100040590 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040590
definition	number : 1 pseudo : _no_value

name	LOC667486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667486
definition	number : 4 pseudo : _no_value

name	LOC667486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667486
definition	number : 3 pseudo : _no_value

name	LOC667486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667486
definition	number : 2 pseudo : _no_value

name	LOC667486 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667486
definition	number : 1 pseudo : _no_value

name	LOC100041013 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041013
definition	number : 1 pseudo : _no_value

name	LOC100040707 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040707
definition	number : 2 pseudo : _no_value

name	LOC100040707 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040707
definition	number : 1 pseudo : _no_value

name	LOC100041065 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041065
definition	number : 1 pseudo : _no_value

name	EG667429 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149260184 GeneID:667429 MGI:3644692
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein product : predicted gene, EG667429 pseudo : _no_value transcript_id : XR_032281.1

name	LOC667456 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260179 GeneID:667456
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 51 ESTs product : similar to membrane-associated ring finger (C3HC4) 5 pseudo : _no_value transcript_id : XR_031975.1

name	LOC100040990 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260189 GeneID:100040990
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein product : similar to adaptor-related protein complex 2, beta 1 subunit pseudo : _no_value transcript_id : XR_032402.1

clone name	MSMg01-370E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176O06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-420N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344P08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-400J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190N12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336N12
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-214C11.b	B6Ng01-214C11.g
ACC	GA031480	GA031481
length	1,068	1,142
definition	B6Ng01-214C11.b	B6Ng01-214C11.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(100,304,617 - 100,305,683)	(100,126,639 - 100,127,790)
sequence	gaattcctttttccgtgtatgtgtgtgtgtgtgtgtgtgtgtatgtgtgc gtgcgcgcgtgtgtgaactcatgccatggtatgcatttggaacctagagg tcaagttgggaaagtttgtcccctgcttccaccatgtgggtgctgggcgg ggattggtcagatacttagtagcaatcaccttcatccactgagtcatctc gctagcctgatttctaatttttttccacttcaaaggactgatttatttta caaaatctaccttttatccatttactgttacgtgtagtagggcacagcat cacactggacttcatctggatttcattcaaagccactgaacacgtaagca atacccgagttggtctctgccaacagtgttccttctatctcaacactcag tttccgtgccaatttgaaactggttatatgaaactggttatatgaacggg catctcggtagttcagcactggcatgcagtgttctataagctctcaggcc tcagtctgaccaacactggttgttgtaatattgcagaaatgagacaggga gccatagaaacccagcatgtctgtggcaattaccactccaccgtcgaact ttacccccattactgatgtcccagtcaccatggggttttgggtattggaa cccttccttgcatggaagatgggcccatgaggccactgggagtggacggg acatggtaaaactgtctaggagccagactcccagcccagtagccaatctg ccattcccaaaatgcttccattttagtcatctcagctgaagtcaaaaaat tgatttttaatatttttaagtttgttgattttgtgtgtagcgcaaggaca ttgtctatatcggtatatattacatgaacactcaacaaaatatgtatttt gttgttgggtgaaagttatgtgaatattgattcgattctggttagataaa tatgtatgaattttatatctttttcaaaaaagatttagttattttatttg agacaccagttgctcatcttcagacacaccagaagtagggcatcagatct tcaattataatggttgtg	gaattcatctcttcggatcatgacatagaggaaaagacaatttattaaag gaaaatataaaagtaaattagtgaaaatctaataatatatgtggattcat gttgaaaggttaaaatattagtatatctataaaatgttgcttttatatct aattttgctttgctatctggaatgagacaggaatgagacaggacccacgc tcccggtgatttggaaccaactaggccaagaggtcttaatatttacgttc ccttaaagcaattgaaaagaggggagacatgcctgcccagccagggctgg gatataggaggatgtcacactcacagagaacatctcagtgccaggacaca agcgttcctgggttgaatgctcagccgtgagcacagctggccttagagca aacacaggatgagggggcctgctgcatcagacaccattagctggagtagg ggcgtgtcccaaggaggagcaaattaaggcagttctaaagaccgaccaag aacgaggaactggaagagcggaacttcttaaatccgagtccagtcctcaa agggcgtcttcactggctctaataatatatagttacttgtagtgcaaatt atagttcctatataatgaagcttagcatatgaataaatattcatttttcc taagacagaacatctcaccagtcaaaaccaatcactgtgagatgttaatt gtgttgcctcctgccatgctgacagggaaaggcagaggtagtacattgct gtcaaattatgccaggaactgcctgatttctgtcataaaagacagattat tttttaaatgtgcaattcaattatttgaagttcaacataactactatagt actcaataaatgttgggtgacaatcataatttcctgtttcagtttgaaat ttagagctatttaaaagtaaaccatttaaagagctggaatcttttttttt ttttttggtctcgtttgatttgcttctttatatgaatatttaatgaacca cagtctcttgattttaagctgaagtataatgatatgttttatttctaact catagttccttccaaatattaaactacctggtttagaatatgatgagatc aacattaggtaaataatgagggaggaagaatagatgataggt
quality values	Open. Hide. 58 36 46 26 58 58 58 58 58 49 58 58 58 42 39 42 62 62 62 47 38 38 38 49 49 49 49 47 47 15 23 13 18 16 18 24 24 24 25 27 43 56 59 59 59 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 51 49 39 36 33 28 25 56 59 59 56 56 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 59 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 59 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 59 56 62 62 62 59 59 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 56 56 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 44 47 47 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 62 62 56 62 62 62 56 47 62 56 62 62 62 49 46 62 49 56 62 62 56 62 62 43 62 56 47 56 39 47 56 62 62 54 62 62 62 62 62 54 56 56 62 54 62 52 62 41 45 62 62 62 62 52 62 62 62 43 49 52 62 62 52 62 62 42 54 62 62 62 62 62 52 62 62 49 54 62 62 62 43 62 52 62 62 62 54 52 41 54 42 45 48 40 47 54 54 54 58 54 54 54 54 54 52 47 34 42 36 44 52 54 54 52 54 48 54 54 37 42 54 54 54 52 54 42 52 54 58 58 52 27 58 23 58 58 52 37 58 26 22 41 32 45 37 45 27 42 42 58 52 58 39 14 14 19 41 54 58 41 46 33 52 37 43 34 25 32 40 43 42 52 41 39 47 33 50 50 40 41 46 40 25 47 51 25 34 37 23 26 50 25 53 34 50 30 21 35 50 50 34 42 30 39 53 25 51 48 39 51 37 50 50 50 35 50 39 53 58 37 58 10 6 58 51 50 32 49 39 53 53 50 37 24 42 58 58 38 36 19 52 34 34 33 37 46 34 37 21 50 40 46 26 11 38 12 24 58 54 58 58 58 38 12 36 53 49 17 53 50 50 25 39 32 31 54 39 54 51 58 16 17 50 27 35 43 35 22 22 17 25 37 18 58 58 38 33 27 54 32 52 39 42 35 39 35 14 6 16 13 19 39 22 19 10 21 28 34 53 35 42 39 30 39 27 27 27 21 30 40 31 42 37 33 34 39 37 29 33 32 29 34 31 25 31 52 33 25 22 29 14 51 54 33 31 15 15 15 31 29 33 54 53 36 13 6 21 33 16 13 31 38 20 31 14 38 44 14 13 7 10 23 23 35 27 33 22 22 6 11 12 9 22 26 18 25 26 5 9 10 31 11 8 21 20 17 14 30 25 45 18 31 47 28 9 16 16 32 12 6 18 24 31 12 9 37 27 16 26 27 29 31 31 33 37 51 32 51 11 46 28 40 32 37 32 17 24 15 46 13 24 12 14 33 18 9 40 46 14 16 19 32 25 13 30 11 4 5 5 9 18 11 12 18 18 25 28 22 6 10 9 9 6 18 19 26 13 16 6 9 15 7 21 31 15 21 41 27 7 6 21 7 39 32 12 15 11 8 14 19 27 16 6 9 9 10 6 8 30 7 15 27 16 13 23 26 19 25 11 9 6 13	Open. Hide. 62 47 51 44 62 59 44 62 62 62 59 51 31 32 19 28 35 54 35 40 54 49 54 59 56 59 59 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 54 49 38 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 56 54 59 62 62 62 62 62 54 62 62 62 62 62 54 54 54 62 59 54 54 54 54 59 62 54 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 42 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 54 62 62 62 62 62 56 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 48 62 62 62 54 54 62 62 58 54 58 58 54 52 58 54 54 58 58 58 58 58 58 54 58 54 42 54 58 58 58 58 58 54 54 54 58 54 54 49 54 58 58 58 58 58 54 54 54 52 58 58 58 58 58 58 54 54 58 52 54 58 58 41 54 54 54 58 58 54 58 43 58 54 58 54 52 54 52 58 58 54 52 58 52 54 58 49 49 24 54 47 50 52 49 58 58 49 50 51 49 19 46 53 42 49 52 32 48 58 58 58 48 50 53 40 50 46 37 58 35 46 50 54 25 42 40 51 58 58 53 50 46 54 46 53 40 53 52 50 49 50 29 39 23 49 49 50 50 50 58 58 49 58 51 30 39 30 46 35 40 50 50 37 58 39 26 47 39 51 41 40 50 39 42 44 41 53 41 49 24 39 51 52 49 50 39 35 31 25 58 58 51 58 40 41 49 19 50 37 54 20 51 28 45 33 35 27 22 21 52 42 53 42 50 52 39 39 28 54 49 32 39 32 35 49 40 40 20 35 28 44 22 29 38 53 40 51 39 53 33 13 54 26 40 34 41 28 33 29 52 34 54 54 41 32 40 30 34 35 34 20 37 35 30 54 54 53 52 42 31 52 24 32 45 28 32 31 30 28 31 41 36 21 32 21 46 32 34 51 46 34 33 45 33 31 35 39 25 31 42 31 34 31 21 31 31 31 42 29 30 30 24 30 24 29 33 32 30 23 30 31 33 46 28 33 38 22 33 44 46 26 19 31 31 21 26 25 30 31 30 31 28 31 28 47 21 30 33 26 42 18 48 25 31 6 7 9 46 31 28 31 48 17 21 48 30 31 13 31 21 26 32 31 31 48 30 31 48 46 28 20 23 15 39 30 9 13 19 26 41 31 22 48 30 23 37 25 21 32 23 32 23 37 24 36 32 48 48 48 44 43 43 44 44 48 48 44 44 44 26 25 38 14 32 24 34 9 14 41 30 12 22 19 48 16 21 16 29 6 8 10 43 22 23 8 20 19 9 10 13 6 13 13 36 17 19 16 8 30 18 9 13 6 11 14 17 17 21 24 11 7 7 25 20 19 14 36 48 19 8 18 22 32 32 28 24 18 13 19 6 15 11 6 7 11 15 6 17 7 18 16 38 38 24 21 17 29 20 8 6 11 11 28 13 25 9 25 9 13 20 7 5 7 8 15 9 4 6 22 6 7 12 5 6 4 8 8 6 25 7 17 11 24 9 19 4 28 10 7 3 6 8 6 4 6 5 8 4 4 3 1 6 13 11 14 7 13 7 24 15 12 16 23 5 16 9 6 7 11 22 7 8 6 7 25 12 9 8 6 11 7 3 7 12 5 8 4 4 9 6 5 7 7 4 9 16

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_100304617_100305683
seq2: B6Ng01-214C11.b_45_1112 (reverse)

seq1  CACAACCATCTATAAT--GAGATCTGATGCCCT-CTTCTGGTGTGTCTGA  47
      ||||||||| ||||||   |||||||||||||| ||||||||||||||||
seq2  CACAACCAT-TATAATTGAAGATCTGATGCCCTACTTCTGGTGTGTCTGA  49

seq1  AGAT-AGCAACT-GTGTACTCAAATAAAATAACTAAATCTTTTTTTAAAA  95
      |||| ||||||| |||| ||||||||||||||||||||| |||||| |||
seq2  AGATGAGCAACTGGTGT-CTCAAATAAAATAACTAAATC-TTTTTTGAAA  97

seq1  AAGATATAAAA-TCATAACATATTTATCTAA-CAGAATCGAATCAATATT  143
      ||||||||||| |||| |||||||||||||| ||||||||||||||||||
seq2  AAGATATAAAATTCAT-ACATATTTATCTAACCAGAATCGAATCAATATT  146

seq1  CACATAACTTTCAACCCAACAACAAAATACATATTTTGTTGAGTGTTCAT  193
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CACATAACTTTC-ACCCAACAACAAAATACATATTTTGTTGAGTGTTCAT  195

seq1  GTAATATATACCGATATAGACAATGTCC-TGCGCTACACACAAAATCAAC  242
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GTAATATATACCGATATAGACAATGTCCTTGCGCTACACACAAAATCAAC  245

seq1  AAACTTAAAAATATTAAAAATCAATTTTTTTGACCTTCAGCTGAGATGAC  292
      |||||||||||||||||||||||| |||||||| ||||||||||||||||
seq2  AAACTTAAAAATATTAAAAATCAA-TTTTTTGA-CTTCAGCTGAGATGAC  293

seq1  TAAAATGGAAGCATTTTGGGAATGGCAGATTGGCTACTGGGCTGGGAGTC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGGAAGCATTTTGGGAATGGCAGATTGGCTACTGGGCTGGGAGTC  343

seq1  TGGCTCCTAGACAGTTTTACCATGTCCCGTCCACTCCCAGTGGCCTCATG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCCTAGACAGTTTTACCATGTCCCGTCCACTCCCAGTGGCCTCATG  393

seq1  GGCCCATCTTCCATGCAAGGAAGGGTTCCAATACCCAAAACCCCATGGTG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCATCTTCCATGCAAGGAAGGGTTCCAATACCCAAAACCCCATGGTG  443

seq1  ACTGGGACATCAGTAATGGGGGTAAAGTTCGACGGTGGAGTGGTAATTGC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGACATCAGTAATGGGGGTAAAGTTCGACGGTGGAGTGGTAATTGC  493

seq1  CACAGACATGCTGGGTTTCTATGGCTCCCTGTCTCATTTCTGCAATATTA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACATGCTGGGTTTCTATGGCTCCCTGTCTCATTTCTGCAATATTA  543

seq1  CAACAACCAGTGTTGGTCAGACTGAGGCCTGAGAGCTTATAGAACACTGC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACCAGTGTTGGTCAGACTGAGGCCTGAGAGCTTATAGAACACTGC  593

seq1  ATGCCAGTGCTGAACTACCGAGATGCCCGTTCATATAACCAGTTTCATAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGTGCTGAACTACCGAGATGCCCGTTCATATAACCAGTTTCATAT  643

seq1  AACCAGTTTCAAATTGGCACGGAAACTGAGTGTTGAGATAGAAGGAACAC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGTTTCAAATTGGCACGGAAACTGAGTGTTGAGATAGAAGGAACAC  693

seq1  TGTTGGCAGAGACCAACTCGGGTATTGCTTACGTGTTCAGTGGCTTTGAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGCAGAGACCAACTCGGGTATTGCTTACGTGTTCAGTGGCTTTGAA  743

seq1  TGAAATCCAGATGAAGTCCAGTGTGATGCTGTGCCCTACTACACGTAACA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCCAGATGAAGTCCAGTGTGATGCTGTGCCCTACTACACGTAACA  793

seq1  GTAAATGGATAAAAGGTAGATTTTGTAAAATAAATCAGTCCTTTGAAGTG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGGATAAAAGGTAGATTTTGTAAAATAAATCAGTCCTTTGAAGTG  843

seq1  GAAAAAAATTAGAAATCAGGCTAGCGAGATGACTCAGTGGATGAAGGTGA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAATTAGAAATCAGGCTAGCGAGATGACTCAGTGGATGAAGGTGA  893

seq1  TTGCTACTAAGTATCTGACCAATCCCCGCCCAGCACCCACATGGTGGAAG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTACTAAGTATCTGACCAATCCCCGCCCAGCACCCACATGGTGGAAG  943

seq1  CAGGGGACAAACTTTCCCAACTTGACCTCTAGGTTCCAAATGCATACCAT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGACAAACTTTCCCAACTTGACCTCTAGGTTCCAAATGCATACCAT  993

seq1  GGCATGAGTTCACACACGCGCGCACGCACACATACACACACACACACACA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGAGTTCACACACGCGCGCACGCACACATACACACACACACACACA  1043

seq1  CACACATACACGGAAAAAGGAATTC  1067
      |||||||||||||||||||||||||
seq2  CACACATACACGGAAAAAGGAATTC  1068

seq1: chr9_100126639_100127790
seq2: B6Ng01-214C11.g_64_1205

seq1  GAATTCATCTCTTCGGATCATGACATAGAGGAAAAGACAATTTATTAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTCTTCGGATCATGACATAGAGGAAAAGACAATTTATTAAAG  50

seq1  GAAAATATAAAAGTAAATTAGTGAAAATCTAATAATATATGTGGATTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATAAAAGTAAATTAGTGAAAATCTAATAATATATGTGGATTCAT  100

seq1  GTTGAAAGGTTAAAATATTAGTATATCTATAAAATGTTGCTTTTATATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAAGGTTAAAATATTAGTATATCTATAAAATGTTGCTTTTATATCT  150

seq1  AATTTTGCTTTGCTATCTGGAATGAGACAGGAATGAGACAGGACCCACGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGCTTTGCTATCTGGAATGAGACAGGAATGAGACAGGACCCACGC  200

seq1  TCCCGGTGATTTGGAACCAACTAGGCCAAGAGGTCTTAATATTTACGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGGTGATTTGGAACCAACTAGGCCAAGAGGTCTTAATATTTACGTTC  250

seq1  CCTTAAAGCAATTGAAAAGAGGGGAGACATGCCTGCCCAGCCAGGGCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAAGCAATTGAAAAGAGGGGAGACATGCCTGCCCAGCCAGGGCTGG  300

seq1  GATATAGGAGGATGTCACACTCACAGAGAACATCTCAGTGCCAGGACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGGAGGATGTCACACTCACAGAGAACATCTCAGTGCCAGGACACA  350

seq1  AGCGTTCCTGGGTTGAATGCTCAGCCGTGAGCACAGCTGGCCTTAGAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTTCCTGGGTTGAATGCTCAGCCGTGAGCACAGCTGGCCTTAGAGCA  400

seq1  AACACAGGATGAGGGGGCCTGCTGCATCAGACACCATTAGCTGGAGTAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGGATGAGGGGGCCTGCTGCATCAGACACCATTAGCTGGAGTAGG  450

seq1  GGCGTGTCCCAAGGAGGAGCAAATTAAGGCAGTTCTAAAGACCGACCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTGTCCCAAGGAGGAGCAAATTAAGGCAGTTCTAAAGACCGACCAAG  500

seq1  AACGAGGAACTGGAAGAGCGGAACTTCTTAAATCCGAGTCCAGTCCTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAGGAACTGGAAGAGCGGAACTTCTTAAATCCGAGTCCAGTCCTCAA  550

seq1  AGGGCGTCTTCACTGGCTCTAATAATATATAGTTACTTGTAGTGCAAATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCGTCTTCACTGGCTCTAATAATATATAGTTACTTGTAGTGCAAATT  600

seq1  ATAGTTCCTATATAATGAAGCTTAGCATATGAATAAATATTCATTTTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCCTATATAATGAAGCTTAGCATATGAATAAATATTCATTTTTCC  650

seq1  TAAGACAGAACATCTCACCAGTCAAAACCAATCACTGTGAGATGTTAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAGAACATCTCACCAGTCAAAACCAATCACTGTGAGATGTTAATT  700

seq1  GTGTTGCCTCCTGCCATGCTGACAGGGAAAGGCAGAGGTAGTACATTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGCCTCCTGCCATGCTGACAGGGAAAGGCAGAGGTAGTACATTGCT  750

seq1  GTCAAATTATGCCAGGAACTGCCTGATTTCTGTCATAAAAGACAGATTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAATTATGCCAGGAACTGCCTGATTTCTGTCATAAAAGACAGATTAT  800

seq1  TTTTTAAATGTGCAATTCAATTATTTGAAGTTCAACATAACTACTATAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAATGTGCAATTCAATTATTTGAAGTTCAACATAACTACTATAGT  850

seq1  ACTCAATAAATGTTGGGTGACAATCATAATTTCCTGTTTCAGGTTTGAAA  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ACTCAATAAATGTTGGGTGACAATCATAATTTCCTGTTTCA-GTTTGAAA  899

seq1  TTTAGAGCTATTTAAAAGTAAACCATTTAAAGAGCTGGAATCTTTTTTTT  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTAGAGCTATTTAAAAGTAAACCATTTAAAGAGCTGGAATC-TTTTTTT  948

seq1  TTTTTTTTGGTCTCGTTTTGATTTGCTTCTTTATATG-ATATTTAATGAA  999
      ||||||||||||||| ||||||||||||||||||||| ||||||||||||
seq2  TTTTTTTTGGTCTCG-TTTGATTTGCTTCTTTATATGAATATTTAATGAA  997

seq1  CCACAGTCTCTTGATTTTAAGCTGAAGTTATATGATATGTTTTATTTCTA  1049
      ||||||||||||||||||||||||||||   |||||||||||||||||||
seq2  CCACAGTCTCTTGATTTTAAGCTGAAGTATAATGATATGTTTTATTTCTA  1047

seq1  ACTCCATTAGTTCTTTCACAATATTAAACTTACTTGGTTTAGATATATAG  1099
      ||||   |||||| |||  |||||||||| ||| ||||||||| |||| |
seq2  ACTC--ATAGTTCCTTCCAAATATTAAAC-TACCTGGTTTAGA-ATAT-G  1092

seq1  ATGAAAGATCAACATTTAGGTAGATAATGAGGGAGGAAG-ATAGATTGAT  1148
      |||  ||||||||| ||||||| |||||||||||||||| ||||| ||||
seq2  ATG--AGATCAACA-TTAGGTAAATAATGAGGGAGGAAGAATAGA-TGAT  1138

seq1  AGGT  1152
      ||||
seq2  AGGT  1142

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information