BAC Information

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BAC

Clone NameB6Ng01-215F24
Chromosome9 (Build37)
Map Location 69,952,834 - 70,103,567
singlet/doubletdoublet
Overlap gene6430514L14Rik, Myo1e
Upstream geneRora, Narg2, EG665815, EG244913, Anxa2, Foxb1, Bnip2, LOC624164, Gtf2a2, Gcnt3
Downstream geneCcnb2, Rnf111, Sltm, B230380D07Rik, Adam10, Cycs-ps1, Lipc, LOC100041622, LOC100041628, Aqp9, 1700020I22Rik, LOC100041660, Aldh1a2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215F24.bB6Ng01-215F24.g
ACCGA032362GA032363
length227850
definitionB6Ng01-215F24.b B6Ng01-215F24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,952,834 - 69,953,060)(70,102,723 - 70,103,567)
sequence
agaagaggccatcaggtcccctggagctggcacttgtgagccatgtgagt
tgacgcggatcctgggaagcaaacggatccttcggaagagcagcaaacac
tctgaagtgctaagctatctcctcaggcccctcctccattgtttgcttat
atgtgacttacatatcacaaactcttcttcatagcgaacagaagaaagat
agtgggagagagggagggatgtggaga
gaattccctgcaggaagaaggagaaaacatggaggtgctggttaatcttg
actgccaactggactagatatggaatcactctttatagatgtacatggag
cagtggttgtggctgggaggactgttctagattcgatgagaagactcacc
ctagatataggtagtcccatgtcacgggctggggagaaagtgagcctagc
agagcgtccacctccctctattggatgaaacatgactggttgcctcaaac
tctccaccatggactgttccctcccaccatcagccaaggattctttcttc
ctaaggttgcttttgccctgtattttctcacagcaatgagaaaagcaatt
aatccagagacagaggaggaggaggcaagctgaagaccatcagccaaaaa
tgtaggctactgctttctaacagcaaactgaaaccacgtccaaggaagct
cccaggacggcctgggcagtggccaggctcaggcacctccagcaacaatg
gagtaggggattttggcccagacctccagcagctgtgtgagtgcctgagg
tcctgggagggtgaggcacagtagagttgttttcttttagaggaaacact
ggaggccctagtgatggacaacggcatctggggggatcagccagtgtggg
aaagacagggccttggcctctctgcctctgtctcgtgactctgtttccct
ggcaccttcagctttgaggtctgcttccatttctccaggggccttcaccc
agtccttagagttagcaatctggagacctacttcaaagcaggtgaaggtg
aattgctggacatgggagcttgttcttctgtcctatgtacttttcctggt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_69952834_69953060
seq2: B6Ng01-215F24.b_55_281

seq1  AGAAGAGGCCATCAGGTCCCCTGGAGCTGGCACTTGTGAGCCATGTGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGCCATCAGGTCCCCTGGAGCTGGCACTTGTGAGCCATGTGAGT  50

seq1  TGACGCGGATCCTGGGAAGCAAACGGATCCTTCGGAAGAGCAGCAAACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGCGGATCCTGGGAAGCAAACGGATCCTTCGGAAGAGCAGCAAACAC  100

seq1  TCTGAAGTGCTAAGCTATCTCCTCAGGCCCCTCCTCCATTGTTTGCTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGTGCTAAGCTATCTCCTCAGGCCCCTCCTCCATTGTTTGCTTAT  150

seq1  ATGTGACTTACATATCACAAACTCTTCTTCATAGCGAACAGAAGAAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACTTACATATCACAAACTCTTCTTCATAGCGAACAGAAGAAAGAT  200

seq1  AGTGGGAGAGAGGGAGGGATGTGGAGA  227
      |||||||||||||||||||||||||||
seq2  AGTGGGAGAGAGGGAGGGATGTGGAGA  227

seq1: chr9_70102723_70103567
seq2: B6Ng01-215F24.g_69_918 (reverse)

seq1  AACAGGAAAAGTACATAGGACAGAAG-ACAAGCT-CCATGT-CAGC-ATT  46
      | |||||||||||||||||||||||| ||||||| |||||| |||| |||
seq2  ACCAGGAAAAGTACATAGGACAGAAGAACAAGCTCCCATGTCCAGCAATT  50

seq1  CACCTTCACCTGCTTTGAAGTAGGTCTCCAGATTGCTAACTCTAAGGACT  96
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTCACCTGCTTTGAAGTAGGTCTCCAGATTGCTAACTCTAAGGACT  100

seq1  GGGTGAAGGCCCCTGGAG-AATGGAAGCAGACCTCAAAGCTGAAGGTGCC  145
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGGTGAAGGCCCCTGGAGAAATGGAAGCAGACCTCAAAGCTGAAGGTGCC  150

seq1  AGGGAAACAGAGTCACGAGACAGAGGCAGAGAGGCCAAGGCCCTGTCTTT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAACAGAGTCACGAGACAGAGGCAGAGAGGCCAAGGCCCTGTCTTT  200

seq1  CCCACACTGGCTGATCCCCCCAGATGCCGTTGTCCATCACTAGGGCCTCC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACTGGCTGATCCCCCCAGATGCCGTTGTCCATCACTAGGGCCTCC  250

seq1  AGTGTTTCCTCTAAAAGAAAACAACTCTACTGTGCCTCACCCTCCCAGGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTCCTCTAAAAGAAAACAACTCTACTGTGCCTCACCCTCCCAGGA  300

seq1  CCTCAGGCACTCACACAGCTGCTGGAGGTCTGGGCCAAAATCCCCTACTC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGCACTCACACAGCTGCTGGAGGTCTGGGCCAAAATCCCCTACTC  350

seq1  CATTGTTGCTGGAGGTGCCTGAGCCTGGCCACTGCCCAGGCCGTCCTGGG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTGCTGGAGGTGCCTGAGCCTGGCCACTGCCCAGGCCGTCCTGGG  400

seq1  AGCTTCCTTGGACGTGGTTTCAGTTTGCTGTTAGAAAGCAGTAGCCTACA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCTTGGACGTGGTTTCAGTTTGCTGTTAGAAAGCAGTAGCCTACA  450

seq1  TTTTTGGCTGATGGTCTTCAGCTTGCCTCCTCCTCCTCTGTCTCTGGATT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGCTGATGGTCTTCAGCTTGCCTCCTCCTCCTCTGTCTCTGGATT  500

seq1  AATTGCTTTTCTCATTGCTGTGAGAAAATACAGGGCAAAAGCAACCTTAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTTTTCTCATTGCTGTGAGAAAATACAGGGCAAAAGCAACCTTAG  550

seq1  GAAGAAAGAATCCTTGGCTGATGGTGGGAGGGAACAGTCCATGGTGGAGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGAATCCTTGGCTGATGGTGGGAGGGAACAGTCCATGGTGGAGA  600

seq1  GTTTGAGGCAACCAGTCATGTTTCATCCAATAGAGGGAGGTGGACGCTCT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGGCAACCAGTCATGTTTCATCCAATAGAGGGAGGTGGACGCTCT  650

seq1  GCTAGGCTCACTTTCTCCCCAGCCCGTGACATGGGACTACCTATATCTAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGCTCACTTTCTCCCCAGCCCGTGACATGGGACTACCTATATCTAG  700

seq1  GGTGAGTCTTCTCATCGAATCTAGAACAGTCCTCCCAGCCACAACCACTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGTCTTCTCATCGAATCTAGAACAGTCCTCCCAGCCACAACCACTG  750

seq1  CTCCATGTACATCTATAAAGAGTGATTCCATATCTAGTCCAGTTGGCAGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGTACATCTATAAAGAGTGATTCCATATCTAGTCCAGTTGGCAGT  800

seq1  CAAGATTAACCAGCACCTCCATGTTTTCTCCTTCTTCCTGCAGGGAATTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATTAACCAGCACCTCCATGTTTTCTCCTTCTTCCTGCAGGGAATTC  850