BAC Information

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BAC

Clone NameB6Ng01-216H02
Chromosome9 (Build37)
Map Location 24,893,183 - 24,893,869
singlet/doubletsinglet
Overlap genenone
Upstream geneNpsr1, Dpy19l1, Cypt4, Tbx20, LOC666251, LOC100040960
Downstream geneHerpud2, LOC666297, 9130004C02Rik, Sept7, EG666327, 2310005P05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216H02.g
ACCGA033133
length688
definitionB6Ng01-216H02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttccctgggcccatctttcctcgctcctgacccactgttttggg
gtagtttccagtactgagttagagctaaatgtgtttctgccaacaattag
ttgaacaacatcagcaagagatattatgcactgtggggcccaaaatcctc
ccccatgattacacttatcttccatactttctaaggcccaggctgctttt
gatagctatttcaagtaggtatgtatcctgggtttcctgaagagctgccc
ttcaggtgagatgtctatactgatgtcttttattgtcttgttactaggtt
attcaacctatttggggcccttagttgcattatttggggaaaggttagtt
cctttagtggcaccctggaagttagtggcttcttttcaacccttaggaac
cagtagttttctgattgggtatttttatcctcttgggggagatttatttc
taggtattttttccctaaaatccattagctgctttttgtttgtttgtttt
tctgttcgtttgttttaactaatacaatctcatctcatacaataagatcg
tcaatccaagggtcaggctcaattttcagtactgaaatgtcaattaatgg
tcacacagtcatcatgtttatcattagggaaatttgtttatcaattcata
aaaaagattcattttgtatctgcatgtgtgagggagag
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_24893183_24893869
seq2: B6Ng01-216H02.g_70_757

seq1  GAATTCTTCCCTGGGCCCATCTTTCCTCGCTCCTGACCCACTGTTTTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCCTGGGCCCATCTTTCCTCGCTCCTGACCCACTGTTTTGGG  50

seq1  GTAGTTTCCAGTACTGAGTTAGAGCTAAATGTGTTTCTGCCAACAATTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTCCAGTACTGAGTTAGAGCTAAATGTGTTTCTGCCAACAATTAG  100

seq1  TTGAACAACATCAGCAAGAGATATTATGCACTGTGGGGCCCAAAATCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACAACATCAGCAAGAGATATTATGCACTGTGGGGCCCAAAATCCTC  150

seq1  CCCCATGATTACACTTATCTTCCATACTTTCTAAGGCCCAGGCTGCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATGATTACACTTATCTTCCATACTTTCTAAGGCCCAGGCTGCTTTT  200

seq1  GATAGCTATTTCAAGTAGGTATGTATCCTGGGTTTCCTGAAGAGCTGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCTATTTCAAGTAGGTATGTATCCTGGGTTTCCTGAAGAGCTGCCC  250

seq1  TTCAGGTGAGATGTCTATACTGATGTCTTTTATTGTCTTGTTACTAGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTGAGATGTCTATACTGATGTCTTTTATTGTCTTGTTACTAGGTT  300

seq1  ATTCAACCTATTTGGGGCCCTTAGTTGCATTATTTGGGGAAAGGTTAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACCTATTTGGGGCCCTTAGTTGCATTATTTGGGGAAAGGTTAGTT  350

seq1  CCTTTAGTGGCACCCTGGAAGTTAGTGGCTTCTTTTCAACCCTTAGGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGTGGCACCCTGGAAGTTAGTGGCTTCTTTTCAACCCTTAGGAAC  400

seq1  CAGTAGTTTTCTGATTGGGTATTTTTATCCTCTTGGGGGAGATTTATTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTTTTCTGATTGGGTATTTTTATCCTCTTGGGGGAGATTTATTTC  450

seq1  TAGGTATTTTTTCCCTAAAATCCATTAGCTGCTTTTTGTTTGTTTGTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATTTTTTCCCTAAAATCCATTAGCTGCTTTTTGTTTGTTTGTTTT  500

seq1  TCTGTTCGTTTGTTTTAACTAATACAATCTCATCTCATACAATAAGATCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCGTTTGTTTTAACTAATACAATCTCATCTCATACAATAAGATCG  550

seq1  TCAATCCAAGGGTCAGGCTCAATTTTCAGTACTGAAATGTCAATTAATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCCAAGGGTCAGGCTCAATTTTCAGTACTGAAATGTCAATTAATGG  600

seq1  TCACACAGTCATCATGTTTATCATTAGGGAAATTTGTTTATCAATTCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAGTCATCATGTTTATCATTAGGGAAATTTGTTTATCAATTCATA  650

seq1  AAAAAGATTCA-TTTGTATCTGCATGTGTGAGGGAGAG  687
      ||||||||||| ||||||||||||||||||||||||||
seq2  AAAAAGATTCATTTTGTATCTGCATGTGTGAGGGAGAG  688


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