BAC Information

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BAC

Clone NameB6Ng01-217I10
Chromosome9 (Build37)
Map Location 93,374,812 - 93,375,968
singlet/doubletsinglet
Overlap geneLOC674371
Upstream genePlscr4, Plod2, LOC100039921, LOC100039931, LOC100039944, LOC667009, LOC100040114
Downstream geneLOC384967, EG384968
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217I10.bB6Ng01-217I10.g
ACCGA033911GA033912
length1,163882
definitionB6Ng01-217I10.b B6Ng01-217I10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagagcttaagatccagtgagctctggatgtcctggaactcact
ctgtagaccaggctggcctcgaactcagaaacctgcctgcctctgcctcc
caagtgctggggttaaaggcatgcaccaccattgtctggctacgcacacc
gttctttagaattaacttctatattcctaacaacatgaatatgcaataac
tggtttaaggaaagactctgaacttgtcataagtaatattcatgttcata
gttgacaagaacaacagcaacaaccgaaaaaaagataaacaaaacaacaa
caataaaaaataactgagtttgagcaagatataatctttctgtagctatg
cctgagtgtcatgcatcagtgcttcctcaccacagatatccatgtttata
tcactacacagtgtgaagacttaaaagtagcagtcacacaaccatctctg
ggataaggctataacaatccaaaggattccactttccacaagactgatct
tggcttttgagcttgtttgcaaataattctagcatattactaaggtgaca
tttatttaaacaaattaaagcattccaaaaatgtgcctgtaaaatagtct
tcacagctaatgagacatacacatatattgaaaatctggtgaccaaaatt
gtatttcatatgaaatctattaaaatatttataccaggtaagattgtcaa
aacagtttatcacttaaaatcagaactaataacataattgtcaggctgtc
aatatgagtcattgagtaaatgtgcttgctaaaatgtctgctaacttcag
ttctttttttctttttttttttttctccagaatccatgtaaagatagcag
ggaaagagccaacttccaaagttattctctgaccctcacatactccctgt
aacaagcataagccctgcatcatgcacaagaagactcaacacatacacat
tcacacagactaacaatacaagaagaattgttacaccggtacaatacact
taggaaaactggtgagtattgtatggtgtaatctgggggatttggtgtgt
ttcttcaatcatggaaagaacaaggtgttctccttacaggtactaaatat
gggaaatcagtagctggaaacattgtagtcaatctttatgggacaccaga
attaaatgtattg

gaattcctaatctttccaagacttttatcatgaaatgatgttggctttgt
caaatgcttcctcagcatctaaggagaagatgatgtggtttttgtctttg
agtttgtttatatagtagattatgttgatggatttctgtatattaaccct
tccttgcatccctgggttgaagcttacttggtcatgatggataatcgttt
cgatctattcttggattctgtttgcgaggattttactgagtatttttgca
tcgatattcataagggaaattgatatgaagttctctttctttgttggatc
tttgtgtggtttaggtatcagagtaattgtggcttcatagaatgaattgg
gtagagtaccttctgtttctattttgtggaattggttgagaagaactgga
attagatcttctttgaaggtctgatagaactctgcactaaaaccatctgg
tcctgggctttttttggttgggagactttccttcatcattccttaatttc
catcctatctttagaaatggttgtttgagatcttctaaatgaggagctat
agctccctgacctaacacaaatccctcaccagagtaagcaacagttttag
agccacagaatctagaaatttttggtccataaaggtgaaaagatggtgtc
cttttttacaaagaaaaaaaaatcacacttgaaacacacttagaggtgag
ctacattggatggagatagcatccagactatcatgacattgtactagact
ctcttattcagatatcttcactgagtaagtaaggcagataaagtaagccg
tccttattataaggtatatcattacattcagaagcactatcaagaaacac
ttttttttgtttggtttgtttttggttttatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_93374812_93375968
seq2: B6Ng01-217I10.b_45_1207

seq1  GAATTCTAGAGCTTAAGATCCAGTGAGCTCTGGATGTCCTGGAACTCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAGCTTAAGATCCAGTGAGCTCTGGATGTCCTGGAACTCACT  50

seq1  CTGTAGACCAGGCTGGCCTCGAACTCAGAAACCTGCCTGCCTCTGCCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGACCAGGCTGGCCTCGAACTCAGAAACCTGCCTGCCTCTGCCTCC  100

seq1  CAAGTGCTGGGGTTAAAGGCATGCACCACCATTGTCTGGCTACGCACACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCTGGGGTTAAAGGCATGCACCACCATTGTCTGGCTACGCACACC  150

seq1  GTTCTTTAGAATTAACTTCTATATTCCTAACAACATGAATATGCAATAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTAGAATTAACTTCTATATTCCTAACAACATGAATATGCAATAAC  200

seq1  TGGTTTAAGGAAAGACTCTGAACTTGTCATAAGTAATATTCATGTTCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTAAGGAAAGACTCTGAACTTGTCATAAGTAATATTCATGTTCATA  250

seq1  GTTGACAAGAACAACAGCAACAACCGAAAAAAAGATAAACAAAACAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACAAGAACAACAGCAACAACCGAAAAAAAGATAAACAAAACAACAA  300

seq1  CAATAAAAAATAACTGAGTTTGAGCAAGATATAATCTTTCTGTAGCTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAAAATAACTGAGTTTGAGCAAGATATAATCTTTCTGTAGCTATG  350

seq1  CCTGAGTGTCATGCATCAGTGCTTCCTCACCACAGATATCCATGTTTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGTGTCATGCATCAGTGCTTCCTCACCACAGATATCCATGTTTATA  400

seq1  TCACTACACAGTGTGAAGACTTAAAAGTAGCAGTCACACAACCATCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTACACAGTGTGAAGACTTAAAAGTAGCAGTCACACAACCATCTCTG  450

seq1  GGATAAGGCTATAACAATCCAAAGGATTCCACTTTCCACAAGACTGATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAGGCTATAACAATCCAAAGGATTCCACTTTCCACAAGACTGATCT  500

seq1  TGGCTTTTGAGCTTGTTTGCAAATAATTCTAGCATATTACTAAGGTGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTTGAGCTTGTTTGCAAATAATTCTAGCATATTACTAAGGTGACA  550

seq1  TTTATTTAAACAAATTAAAGCATTCCAAAAATGTGCCTGTAAAATAGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAAACAAATTAAAGCATTCCAAAAATGTGCCTGTAAAATAGTCT  600

seq1  TCACAGCTAATGAGACATACACATATATTGAAAATCTGGTGACCAAAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCTAATGAGACATACACATATATTGAAAATCTGGTGACCAAAATT  650

seq1  GTATTTCATATGAAATCTATTAAAATATTTATACCAGGTAAGATTGTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCATATGAAATCTATTAAAATATTTATACCAGGTAAGATTGTCAA  700

seq1  AACAGTTTATCACTTAAAATCAGAACTAATAACATAATTGTCAGGCTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTTATCACTTAAAATCAGAACTAATAACATAATTGTCAGGCTGTC  750

seq1  AATATGAGTCATTGAGTAAATGTGCTTGCTAAAATGTCTGCTAACTTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAGTCATTGAGTAAATGTGCTTGCTAAAATGTCTGCTAACTTCAG  800

seq1  TTCTTTTTTTC-TTTTTTTTTTTTCTCCAGAATCCATGTAAAGATAGCAG  849
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTCTTTTTTTTTTTTTCTCCAGAATCCATGTAAAGATAGCAG  850

seq1  GG-AAGAGCCAACTTCCAAAGTTATTCTCTGACCCTCACATACTCCCTGT  898
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAGCCAACTTCCAAAGTTATTCTCTGACCCTCACATACTCCCTGT  900

seq1  AACAAGCATAAGCCCTGCATCATGCACAAGAAGACTCAACACATACACAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCATAAGCCCTGCATCATGCACAAGAAGACTCAACACATACACAT  950

seq1  TCACACAGACTAACAATACAAAGAGAA-TGTTACACC-GTACAATACACC  996
      |||||||||||||||||||||  |||| ||||||||| |||||||||| |
seq2  TCACACAGACTAACAATACAAGAAGAATTGTTACACCGGTACAATACA-C  999

seq1  TTAAGAAAAAACT-GTGAGTATTGTAT-GTGTAATCT-GGGGATTT-GTG  1042
      ||| |  |||||| ||||||||||||| ||||||||| |||||||| |||
seq2  TTAGG--AAAACTGGTGAGTATTGTATGGTGTAATCTGGGGGATTTGGTG  1047

seq1  TGTTTCTCCAATCATTGGAAAG-ACAA-GTG-TCTCCTTACAAGTACTAA  1089
      ||||||| |||||| ||||||| |||| ||| |||||||||| |||||||
seq2  TGTTTCTTCAATCA-TGGAAAGAACAAGGTGTTCTCCTTACAGGTACTAA  1096

seq1  ATATGGGAAATCAGTAGCTGAAAACA-TGTAGTTCAAATCTTTAT-GGAC  1137
      |||||||||||||||||||| ||||| ||||||   ||||||||| ||||
seq2  ATATGGGAAATCAGTAGCTGGAAACATTGTAGT--CAATCTTTATGGGAC  1144

seq1  A-CAGAATATAAAATGTATTG  1157
      | ||||  || ||||||||||
seq2  ACCAGA--ATTAAATGTATTG  1163


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