BAC Information

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BAC

Clone NameB6Ng01-218G12
Chromosome9 (Build37)
Map Location 11,740,696 - 11,741,766
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665178
Downstream geneLOC100039989, LOC622505, LOC100039680
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218G12.bB6Ng01-218G12.g
ACCGA034544GA034545
length1,1221,200
definitionB6Ng01-218G12.b B6Ng01-218G12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttttattttattttattagatattttctttatttacatttcaa
atgctatcccaaaagttccctataccctcccccaaccctgctcccctacc
cacccactcccacttcttggtcctggcgttcccatgtactgggacatata
aagtttgcaagacctaggggcctctcttcccaatgatggccaactaggcc
atcttctgctacaaatgcagctagagacatgagctttggggtgtactggt
tagttcatattgttgttccacctatagggttgcagaccccttcagctcct
tgggtgctttctccagcttttccattgggagccctgtgttccatcttata
gatgactgtgagcatccacttctgtatttgccaggcactggcgtaacctc
ataaaagacagctatatcagggtcctttcagcaaaatcgtgctggcatat
acaatagtgtctgggtttggtggctgattttgggatgcatctgtatagtc
catcctttcatcttagctccaaactttgtctctttaactccttgcatggg
tattttgtgtcacagtataattgagtagagttaccaaagcttccaggaaa
gcttgacactagtatttaataatgtgtaatcagggaagaaagaaacactt
tttcacattgttttgtggcagtccctgcaacaatctctttcttttaaggt
gacctggcaataaggaataagatttgatttttgctgaacatgtggcttta
gtaagaaaacactcatctagcatgggtgagcccctaaattcttctcagga
atagaagggcacacctttaatataatcaggagcagaatgtagaaaaatgg
gctacattcaatgctttaattgtgatacctactaagcacaagatagcttg
tgatatacatgaccatgtctcgaaacaaaataatccagaaccagatttga
ttcaatttattattattgaaggtccacatagaattgtgttgggggggaga
tgttacctgaacaagtgaagaaatagcctatcattatttcagttccattg
gtggaaaatatgttatcgaagaaaatagctttagattttaaaatagcctc
taagtcagtctcattctgggca

gaattccagttttgtgtttgataccaaattctttacaagatgatgtaaaa
tttttactagaataggatggcccgttatctgtcttaataagtttaggcaa
tccgatgacattaaaggcttgtaggtaattatcaattacgttttttagaa
gcctctcctgtatgcagagaagcaaaaagaagtcctgaagaagtatcaat
acaaacatgtatatattttaattttccaaattccacataatgagttacat
ccatttgtcaaatatgattaggcataagtcctctaggattgactcctaaa
tgtggcactggagataatgtaatacatttaggacattgttttacaatcat
tctcgattgctccttagtgatcttatgttggagccttaaggtatggctag
agagatgaaacttttcatgatcacatttggccaaagcaacaggatctgaa
attaaggcttctcctatgagagctctgtcaatgcaatcattgccttcagc
taaaggtccaggaagaccagaatgagattgtatgtggccaatatagaacg
gatatttgtgggtaagaatgatgttttgcaattgtgaaaacaaggatcct
gctggcgtattaaagttaaacgtaccacaagtctccaataagggtactga
ttgtgcaacatataaactatcagtaaagatattaaaagcctcatgcacag
actgaaaaaccttcagtactgctgttaattcggctaactgagccgaaagg
ccaggagtctctatgataacttgtttgattattaataagatatccagctt
gccctttagaggagtcatcagtaaaaatcaatagagcataatataaaggc
tgtaaggaagtaattttataaatatcacctcatgtacatttaaaatttgt
atcaacctatcttgagggtagtggctgtctatagtttccattaaccctat
ttgtgcaagcaaccaatccatactatgctgtttcagccaagtgtgtttga
cttatgctgtaaggctgaacataatatctggctctggccaaatagttagt
gctgcttcttccatgacatcattggctactgcttcatgaatatggcaaga
cttacttttagagaaattcttggaatgtatccataagtaccttttgccat
agccaatcctgtaagccacatggagagtcgctattttaaaaatactttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_11740696_11741766
seq2: B6Ng01-218G12.b_104_1166

seq1  CAAAAGTTCCCTATACCCTCCCCCAACCCTGCTCCCCTACCCACCCACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTTCCCTATACCCTCCCCCAACCCTGCTCCCCTACCCACCCACTC  50

seq1  CCACTTCTTGGTCCTGGCGTTCCCATGTACTGGGACATATAAAGTTTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTCTTGGTCCTGGCGTTCCCATGTACTGGGACATATAAAGTTTGCA  100

seq1  AGACCTAGGGGCCTCTCTTCCCAATGATGGCCAACTAGGCCATCTTCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTAGGGGCCTCTCTTCCCAATGATGGCCAACTAGGCCATCTTCTGC  150

seq1  TACAAATGCAGCTAGAGACATGAGCTTTGGGGTGTACTGGTTAGTTCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATGCAGCTAGAGACATGAGCTTTGGGGTGTACTGGTTAGTTCATA  200

seq1  TTGTTGTTCCACCTATAGGGTTGCAGACCCCTTCAGCTCCTTGGGTGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTCCACCTATAGGGTTGCAGACCCCTTCAGCTCCTTGGGTGCTT  250

seq1  TCTCCAGCTTTTCCATTGGGAGCCCTGTGTTCCATCTTATAGATGACTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGCTTTTCCATTGGGAGCCCTGTGTTCCATCTTATAGATGACTGT  300

seq1  GAGCATCCACTTCTGTATTTGCCAGGCACTGGCGTAACCTCATAAAAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATCCACTTCTGTATTTGCCAGGCACTGGCGTAACCTCATAAAAGAC  350

seq1  AGCTATATCAGGGTCCTTTCAGCAAAATCGTGCTGGCATATACAATAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATATCAGGGTCCTTTCAGCAAAATCGTGCTGGCATATACAATAGTG  400

seq1  TCTGGGTTTGGTGGCTGATTTTGGGATGCATCTGTATAGTCCATCCTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTTTGGTGGCTGATTTTGGGATGCATCTGTATAGTCCATCCTTTC  450

seq1  ATCTTAGCTCCAAACTTTGTCTCTTTAACTCCTTGCATGGGTATTTTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAGCTCCAAACTTTGTCTCTTTAACTCCTTGCATGGGTATTTTGTG  500

seq1  TCACAGTATAATTGAGTAGAGTTACCAAAGCTTCCAGGAAAGCTTGACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTATAATTGAGTAGAGTTACCAAAGCTTCCAGGAAAGCTTGACAC  550

seq1  TAGTATTTAATAATGTGTAATCAGGGAAGAAAGAAACACTTTTTCACATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTTAATAATGTGTAATCAGGGAAGAAAGAAACACTTTTTCACATT  600

seq1  GTTTTGTGGCAGTCCCTGCAACAATCTCTTTCTTTTAAGGTGACCTGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTGGCAGTCCCTGCAACAATCTCTTTCTTTTAAGGTGACCTGGCA  650

seq1  ATAAGGAATAAGATTTGATTTTTGCTGAACATGTGGCTTTAGTAAGAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGAATAAGATTTGATTTTTGCTGAACATGTGGCTTTAGTAAGAAAA  700

seq1  CACTCATCTAGCATGGGTGAGCCCCTAAATTCTTCTCAGGAATAGAAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATCTAGCATGGGTGAGCCCCTAAATTCTTCTCAGGAATAGAAGGG  750

seq1  CACACCTTTAATATAATCAGGAGCAGAATGTAGAAAAATGGGCTACATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTTTAATATAATCAGGAGCAGAATGTAGAAAAATGGGCTACATTC  800

seq1  AATGCTTTAATTGTGATACCTACTAAGCACAAGATAGCTTGTGATATACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTTAATTGTGATACCTACTAAGCACAAGATAGCTTGTGATATACA  850

seq1  TGACCATGTCTCGAAACAAAATAATCCAGAACCAGATTTGATTCAATTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATGTCTCGAAACAAAATAATCCAGAACCAGATTTGATTCAATTTA  900

seq1  TTA-TATTGAAGGTCCACATAGAATTGTGTT-GGGGGGAGATGTTACCTG  948
      ||| ||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTATTATTGAAGGTCCACATAGAATTGTGTTGGGGGGGAGATGTTACCTG  950

seq1  -ACAAGTGAAGAAATAGCC-ATCATTAATTCAGTTCCATTGGTGGAAAAT  996
       |||||||||||||||||| ||||||| ||||||||||||||||||||||
seq2  AACAAGTGAAGAAATAGCCTATCATTATTTCAGTTCCATTGGTGGAAAAT  1000

seq1  ATGTTATCGAAGGAAAAATAAGCTTTTAAGAATTTTTAAAAATAGCCTCC  1046
      ||||||||||||  ||||| ||||||  |||   ||| |||||||||| |
seq2  ATGTTATCGAAG--AAAAT-AGCTTT--AGA---TTTTAAAATAGCCT-C  1041

seq1  TAAAGTTCAGTCTCATTTCTGGGCA  1071
      |||   ||||||||| |||||||||
seq2  TAA--GTCAGTCTCA-TTCTGGGCA  1063


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