BAC Information

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BAC

Clone NameB6Ng01-218N01
Chromosome9 (Build37)
Map Location 17,692,156 - 17,692,898
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434373, LOC100040074, LOC100040090, LOC244710, LOC100040508
Downstream geneEG665548, LOC665554, LOC665567, Chordc1, Naalad2, B020006M18Rik, Map1lc3-ps, Mbd3l2, Zfp558, Mbd3l1, Muc16, Olfr24, Olfr828, Olfr829, Olfr830
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218N01.bB6Ng01-218N01.g
ACCGA034845GA034846
length909743
definitionB6Ng01-218N01.b B6Ng01-218N01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcactaaatccatctggtcctggacatttttttggttgagaga
cttttaatgattgcttatattgctttagaggttatgggactgtttaaatg
gtttatttgattctcatttggtacctggtatctgtctagacaattatcag
tttcatccatattttccagttttgttgggtataggcttttgtagtaggat
ttgatgattttttggatttccttggcttctgttgttatgtctcacttttc
atttctgattttgttaattaggatactgtccctgtgcactctagtgggtc
tgtctgtctaagggtttatctatcttgttgattttctcaaaaaaactagc
tcctggttttgttcctcctttgtatagttctttttgtgtctacttcatta
atttcagccccgagtttgattatttcctgctgtctactcctctagggtgt
atttgcttctgtttgttctagagctttcagatgtactgtcaagtagctac
tgcatgctctctctagtttctttttgaaggtactcagaactatgtgtttt
cctcttagcactgatttcattgtgtcccttaagtttgggtatgttttggt
ttcattttcattaaactctaaaaagtatttaatttctttctttatgcctt
ccttgaccaagttatcattgagttttgttcagtttccaagggtgtgtggg
atttctattgcttatgttgttattgaagaccagtcttagtctgtggtctg
ataggatgcatggtattatttcaatattttttttatctgttgaggcctgt
tttgtgacagatcaactatggtcacttgttgggataaggtactgtgaggt
gatgagaacaggtatattctttttatttatttatttttttaagggtaaaa
tattctata
gaattccgacagtgttgaataaatagatgtcttgatgaatgaattctggt
aggaaatccaaatcactatgttatcaactcagattatcagattgatatta
ttcatttattcatttataaatgttggggcaataaaggaaacaagcttatt
gtattaattcaattgttccttagttaaaaaataggatttatctatctctg
tgaaccctggactggatcctagtaagtggaatgataaaattaccttttca
aaactaaaataaattatgacatatgtgtgttgagtcatgaaaacactttt
acattcatatttaaagaaataaaaaggttttatttcttttatttacattt
atgggtataattaatcattaacaccttgagtataatactaaaaaatcaat
taattaaatattaattttctgaactattcagtttattctagttatgaaac
atggtttgttttattaacaatctagaatccatgtgggagatgaattattt
aatgaattgctatttcttagttgaaaaataattgttaagaaattttaagt
atattttggaggaaaaattgaaacttttgaaagtcattagtactttggca
aacgaaataatggtgtttataaaagtacaggtgggtggcatgtgaaaaga
ggaagagacctgagggtagagtgggcagagaagagtgagcaggaatgaaa
atgtcttttatttgtgcaactattatatatgtgtgcgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_17692156_17692898
seq2: B6Ng01-218N01.g_62_804

seq1  GAATTCCGACAGTGTTGAATAAATAGATGTCTTGATGAATGAATTCTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCGACAGTGTTGAATAAATAGATGTCTTGATGAATGAATTCTGGT  50

seq1  AGGAAATCCAAATCACTATGTTATCAACTCAGATTATCAGATTGATATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATCCAAATCACTATGTTATCAACTCAGATTATCAGATTGATATTA  100

seq1  TTCATTTATTCATTTATAAATGTTGGGGCAATAAAGGAAACAAGCTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTATTCATTTATAAATGTTGGGGCAATAAAGGAAACAAGCTTATT  150

seq1  GTATTAATTCAATTGTTCCTTAGTTAAAAAATAGGATTTATCTATCTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAATTCAATTGTTCCTTAGTTAAAAAATAGGATTTATCTATCTCTG  200

seq1  TGAACCCTGGACTGGATCCTAGTAAGTGGAATGATAAAATTACCTTTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCTGGACTGGATCCTAGTAAGTGGAATGATAAAATTACCTTTTCA  250

seq1  AAACTAAAATAAATTATGACATATGTGTGTTGAGTCATGAAAACACTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAAATAAATTATGACATATGTGTGTTGAGTCATGAAAACACTTTT  300

seq1  ACATTCATATTTAAAGAAATAAAAAGGTTTTATTTCTTTTATTTACATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCATATTTAAAGAAATAAAAAGGTTTTATTTCTTTTATTTACATTT  350

seq1  ATGGGTATAATTAATCATTAACACCTTGAGTATAATACTAAAAAATCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTATAATTAATCATTAACACCTTGAGTATAATACTAAAAAATCAAT  400

seq1  TAATTAAATATTAATTTTCTGAACTATTCAGTTTATTCTAGTTATGAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAAATATTAATTTTCTGAACTATTCAGTTTATTCTAGTTATGAAAC  450

seq1  ATGGTTTGTTTTATTAACAATCTAGAATCCATGTGGGAGATGAATTATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTGTTTTATTAACAATCTAGAATCCATGTGGGAGATGAATTATTT  500

seq1  AATGAATTGCTATTTCTTAGTTGAAAAATAATTGTTAAGAAATTTTAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATTGCTATTTCTTAGTTGAAAAATAATTGTTAAGAAATTTTAAGT  550

seq1  ATATTTTGGAGGAAAAATTGAAACTTTTGAAAGTCATTAGTACTTTGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGGAGGAAAAATTGAAACTTTTGAAAGTCATTAGTACTTTGGCA  600

seq1  AACGAAATAATGGTGTTTATAAAAGTACAGGTGGGTGGCATGTGAAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGAAATAATGGTGTTTATAAAAGTACAGGTGGGTGGCATGTGAAAAGA  650

seq1  GGAAGAGACCTGAGGGTAGAGTGGGCAGAGAAGAGTGAGCAGGAATGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGACCTGAGGGTAGAGTGGGCAGAGAAGAGTGAGCAGGAATGAAA  700

seq1  ATGTCTTTTATTTGTGCAACTATTATATATGTGTGCGTGTGTG  743
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTTTATTTGTGCAACTATTATATATGTGTGCGTGTGTG  743