BAC Information

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BAC

Clone NameB6Ng01-218P16
Chromosome9 (Build37)
Map Location 109,058,925 - 109,060,083
singlet/doubletsinglet
Overlap geneE330009P21Rik
Upstream geneBsn, LOC100042108, Dag1, Nicn1, EG434437, Tcta, Rhoa, Gpx1, Usp4, LOC623859, 1700102P08Rik, Ccdc36, BC048562, Klhdc8b, LOC100042228, Ccdc71, Lamb2, Usp19, Qars, Qrich1, Impdh2, 4733401H18Rik, Dalrd3, Wdr6, 4933406E20Rik, Arih2, ENSMUSG00000074075, Slc25a20, Prkar2a, Ihpk2, Nckipsd, Celsr3, Slc26a6, LOC100038959, Tmem89, Uqcrc1, Col7a1, Pfkfb4, Scotin, Trex1, 6620401K05Rik, Ccdc72, Ccdc51, EG665413, Plxnb1
Downstream geneFbxw13, Fbxw12, Fbxw14, LOC668758, EG382156, Fbxw16, Fbxw19, LOC635668, Fbxw15, EG382106, E330001B16Rik, C85627, EG382109, 1700124P09Rik, Spink8, 3000002C10Rik, Nme6, Camp, Cdc25a, LOC100043782, Mtap4, LOC100049540, Dhx30, Smarcc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218P16.bB6Ng01-218P16.g
ACCGA034955GA034956
length1,1531,158
definitionB6Ng01-218P16.b B6Ng01-218P16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcatggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatataatttcctaaacacaagaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccaaaatgtagctgtctcttgtgagactatgcccggggcctagcaa
acacagaattggattctcacagtcagctaatggatggatcacaagggctt
ccctatggaggagctagagaaagtacccaggagctaaagggatctgcaac
ctatagtggaacacattatgaactaaccagtacccccgagctctggcttc
tagctgcatatgtatcaaaatgaatggctagtcgccatcatggaaagaaa
gcctaatgtctgccaatcttatatgcctcattacagggagactgctaggc
cca
gaattcctgcaaggaaaccccaaggatatgtggacagttgagaggcgatt
caaactgaagtaggtatggttcccttccctctgccatggataaaagctgt
ggaacggatgaagtgagaggcaaccaagcacactgcaggctgggcatttg
ttcaggtgcatttactctttagactgtttctatagatataaagtaggtac
tgggggctagggctgtaactcctgggcagagtgctctgttctgttcttag
aggcctatgaaccataaaccagtactcatttggaggcagaaagatccaaa
gttctaggtcattggtgtttgttatgtggagcgttggaggtcagcctgtg
gtacatgagattctgaagaaagaaagaaagaaagaatgaaagaaagaaag
aaagaggaagaaagaaagaaagagagagaggaataaagaaagaatgaaag
gaaataaggaaggaaggaagaaagaaagaaagaaaaaatgaataaagaaa
agagaggaaaagaaagggaaagaaaagaaacagccaggtgtacagatgta
ccagtcccagtgagggcagcagcagaccttgagtttgaggccagcctagt
ctacagatcaaatttcatgctagccttgactatattgtgaggccttattt
caaaacaaacagaaaagatgagattcttcccaccaggaggacaaaattga
caaagttgtcttctgctacatacacactatgccatttacacacatcacat
gcacatacactatagtaactgtaaaaaaattaaaaagtatctctatatca
gaaaactgttctgaggaaggctttgaaaaaaagataaatactaaagtcta
cttggtaatttccccagtaatctctctctatactctgggaagggtatgaa
gccttcaaggaaagggaacgataaggctggttttacaatgttgagcaagc
actcagaagatcacagattggcctccatgggctaggctagcacagcaggc
ccatcctgttaaactacactttcctttctcttataaaatgagaatgtaag
tctgcacagaattgagaaaatcagtggggggtcttcttcttagctaccag
gccaataccatactctgcagatttcctggtaattgaaatcttcctggctt
gtccggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_109058925_109060083
seq2: B6Ng01-218P16.g_64_1221

seq1  GAATTCCTGCAAGGAAACCCCAAGGATATGTGGACAGTTGAGAGGCGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCAAGGAAACCCCAAGGATATGTGGACAGTTGAGAGGCGATT  50

seq1  CAAACTGAAGTAGGTATGGTTCCCTTCCCTCTGCCATGGATAAAAGCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGAAGTAGGTATGGTTCCCTTCCCTCTGCCATGGATAAAAGCTGT  100

seq1  GGAACGGATGAAGTGAGAGGCAACCAAGCACACTGCAGGCTGGGCATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACGGATGAAGTGAGAGGCAACCAAGCACACTGCAGGCTGGGCATTTG  150

seq1  TTCAGGTGCATTTACTCTTTAGACTGTTTCTATAGATATAAAGTAGGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTGCATTTACTCTTTAGACTGTTTCTATAGATATAAAGTAGGTAC  200

seq1  TGGGGGCTAGGGCTGTAACTCCTGGGCAGAGTGCTCTGTTCTGTTCTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGCTAGGGCTGTAACTCCTGGGCAGAGTGCTCTGTTCTGTTCTTAG  250

seq1  AGGCCTATGAACCATAAACCAGTACTCATTTGGAGGCAGAAAGATCCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTATGAACCATAAACCAGTACTCATTTGGAGGCAGAAAGATCCAAA  300

seq1  GTTCTAGGTCATTGGTGTTTGTTATGTGGAGCGTTGGAGGTCAGCCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAGGTCATTGGTGTTTGTTATGTGGAGCGTTGGAGGTCAGCCTGTG  350

seq1  GTACATGAGATTCTGAAGAAAGAAAGAAAGAAAGAATGAAAGAAAGAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATGAGATTCTGAAGAAAGAAAGAAAGAAAGAATGAAAGAAAGAAAG  400

seq1  AAAGAGGAAGAAAGAAAGAAAGAGAGAGAGGAATAAAGAAAGAATGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGAAGAAAGAAAGAAAGAGAGAGAGGAATAAAGAAAGAATGAAAG  450

seq1  GAAATAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAAAATGAATAAAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAAAATGAATAAAGAAA  500

seq1  AGAGAGGAAAAGAAAGGGAAAGAAAAGAAACAGCCAGGTGTACAGATGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGAAAAGAAAGGGAAAGAAAAGAAACAGCCAGGTGTACAGATGTA  550

seq1  CCAGTCCCAGTGAGGGCAGCAGCAGACCTTGAGTTTGAGGCCAGCCTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCCCAGTGAGGGCAGCAGCAGACCTTGAGTTTGAGGCCAGCCTAGT  600

seq1  CTACAGATCAAATTTCATGCTAGCCTTGACTATATTGTGAGGCCTTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGATCAAATTTCATGCTAGCCTTGACTATATTGTGAGGCCTTATTT  650

seq1  CAAAACAAACAGAAAAGATGAGATTCTTCCCACCAGGAGGACAAAATTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAACAGAAAAGATGAGATTCTTCCCACCAGGAGGACAAAATTGA  700

seq1  CAAAGTTGTCTTCTGCTACATACACACTATGCCATTTACACACATCACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTGTCTTCTGCTACATACACACTATGCCATTTACACACATCACAT  750

seq1  GCACATACACTATAGTAACTGTAAAAAAATTAAAAAGTATCTCTATATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATACACTATAGTAACTGTAAAAAAATTAAAAAGTATCTCTATATCA  800

seq1  GAAAACTGTTCTGAGGAAGGCTTTGAAAAAAAGATAAATACTAAAGTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTGTTCTGAGGAAGGCTTTGAAAAAAAGATAAATACTAAAGTCTA  850

seq1  CTTGGTAATTTCCCCAGTAATCTCTCTCTATACTCTGGGAAGGGTATGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTAATTTCCCCAGTAATCTCTCTCTATACTCTGGGAAGGGTATGAA  900

seq1  GCCTTCAAGGAAAGGGAACGATAAGGCTGGTTTTACAATGTTGAGCAAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCAAGGAAAGGGAACGATAAGGCTGGTTTTACAATGTTGAGCAAGC  950

seq1  ACTCAGAAGATCACAGATTGG-CTCCAT-GGCTAGGCTAGCACAGCAGGC  998
      ||||||||||||||||||||| |||||| |||||||||||||||||||||
seq2  ACTCAGAAGATCACAGATTGGCCTCCATGGGCTAGGCTAGCACAGCAGGC  1000

seq1  CCATCCTGTTAAACTACACTTTCCTTTCTCTTATTAAATGAGAATGTAGG  1048
      |||||||||||||||||||||||||||||||||| ||||||||||||| |
seq2  CCATCCTGTTAAACTACACTTTCCTTTCTCTTATAAAATGAGAATGTAAG  1050

seq1  TCTGCACAGAA-TGAGAAAAATCAAGTGGGGGGTC-TCTTCTAGGCTACC  1096
      ||||||||||| |||| |||||| ||||||||||| ||||||  |||| |
seq2  TCTGCACAGAATTGAG-AAAATC-AGTGGGGGGTCTTCTTCTTAGCTA-C  1097

seq1  CAAGCCCATACCATACTCTGCAGGAATTTCCTTGTAAATGAAATCTT-CT  1145
      || ||| ||||||||||||||||  ||||||| |||| ||||||||| ||
seq2  CAGGCCAATACCATACTCTGCAG--ATTTCCTGGTAATTGAAATCTTCCT  1145

seq1  GGCTTTGCCCGGGA  1159
      ||| ||| ||||||
seq2  GGC-TTGTCCGGGA  1158