BAC Information

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BAC

Clone NameB6Ng01-219O24
Chromosome9 (Build37)
Map Location 79,645,351 - 79,646,536
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666456, LOC436085, LOC235509, LOC666479, Col12a1, Cox7a2, Tmem30a
Downstream geneFilip1, LOC100041218, LOC666490, Senp6, LOC100041249, Myo6, Impg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219O24.bB6Ng01-219O24.g
ACCGA035630GA035631
length1,1811,184
definitionB6Ng01-219O24.b B6Ng01-219O24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagaaattgagcacagggctccaccagctccacaagcaagatac
tggatacattttttttaaaatgtgttagaggttgaacctgggtctcatac
atgtttagcaagtattccatcactgagcctcacaccacactttggataat
gtcttgaaatggcaatccctgctaagatgaggcctgacctccccttcatt
caagttcctgatcttcccaatttttagatctcttccccaaccccctttcc
ctctctttttgctctttataaatggttcttacatgtcttttgcaggaagc
catatattaactcaagtcccatgtgctttataggcaaccagtgacctgct
tttaactctcaaaatggctctttgagtatgagcaccttagacaatgggtt
ctatgtcttcttcactaaaggatcctggtgagtgtattcagtgctttctt
accagaaatgtgtgcccatgaaaagttttagatctagaccactgattcta
aaggaagatatgttgtctgtaaggaccagaggcccacggcaggcgggctt
ccagactgtgctcattcaaaggggccaggcattagggttcacatggaaca
ctgatcccagcaggagtaggacaaatgaactatataagttaatgtatata
ttactgttcttatgctgttacaaggcaccatgaccacgacaactcttcca
aatgaaagcaggtatatggcagccacatgcagccaggctggaggagtagc
taagagttacatcctgatctgcatgaaggactgggcctggtgtcggcttt
tgaaatctcaagggcttcttccagtgacatacctcctccagtcccacagc
tactccaaggaggccacgcttcctaatattttccaacagttccacttcct
ggttaccaagcatccaatatatatgagcccatgggggtcttctcactcaa
ccaccacagttaacaattctcacccaattcaagcactggagacatttgtt
gctatggtgatatacctgctacacccatgctagaacaacttggtccaccc
agggtaatgtagagtgttaatgcatgtagcatagtcctccgtttgatagc
attctatttttcctctttggattgggaccttctctttcctacaggcttag
ttgactctagaggtcctcatacaacccctgt

gaattcagtgaacatgaagacatatcatacccaaatttatgggacacaat
taaaccagcactaagaggaaaattcatagtactaagggccttcatgaaga
aattggagagatcccatacaaacaacagcacacctgaaagttctagaata
gaaagaagcaaaaaggagtagacagcaggaaatatttaaactcagggctg
gaatcaaccggttaaaaacaaagagaactatacaaagaatcaacaaaacc
aagagctggttctttaagaaaatcaacacaataggcaaatccttggccaa
actaactaaagggcacaaagacagtatccaaattatcaaaaataagaaaa
aaagacttaacagaaactgagaaaatacaaaaactcatcagaacctatta
caaaacctatactctacaaaactggaaaatctagatgaaatgggtgactt
tctagacagatatcacatgccaaagttaaatcaagatcaggtaaactgtc
taaacagtcccttaactcctaaggaaacagaaatagtcatcaaaatcaaa
ccaaaaagagcccagtgccagatgattttagtgcaaacttctaccagact
ttcaaagaagagctaataccaacactcctaaaactatttcacaaagtaga
aacagaaggaacactacctaattcattctataaagccacaattactctga
tacttaaaccacacaaaggcccaacaaagaaagaaaacttcagaccgatc
ttgcatatgaatattgatgcaaaagatactcaacaaaattctcacaaacc
aaatccaagaatagatcaaaggcatcattcaacataatcaaataggcttc
attccagggatgcagggatggttcaatatatgaaaatccatcaacataat
acattatataaatgaactcatgatgaaaaaaacccacatgattatctaac
tagatgctgaaaaagccttccacaaaatacacactccttcatgtatagtc
ctgagaagatcaggaatttatggcacataccttaacatataaagcaatat
aataccaaccaaacagcacataaaataaatgcagagaaactggagcattc
ccactaaaattcaggacagacaggttgcatatctctccttctgttctatt
tcaatatagtttcttccaaggtctcttaaccctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_79645351_79646536
seq2: B6Ng01-219O24.b_44_1224 (reverse)

seq1  ACAGGGGTTGTATGAGGCCCTTCTATGATGTCAAACACTAAG-CTGTAGG  49
      ||||||||||||||||| || |||| || ||||   |||||| |||||||
seq2  ACAGGGGTTGTATGAGGACC-TCTA-GA-GTCA---ACTAAGCCTGTAGG  44

seq1  GAAGAGA--GTCCCCATTC-AAGAG--AAAATAGAATGCTAACCAAAGGA  94
       ||||||  ||||| || | |||||  |||||||||||||| | || |||
seq2  AAAGAGAAGGTCCCAATCCAAAGAGGAAAAATAGAATGCTATCAAACGGA  94

seq1  GACTTATGCTACATGCATTAACACTCTACATTACCCTGGGT-GACCAAGT  143
      |   ||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGACTATGCTACATGCATTAACACTCTACATTACCCTGGGTGGACCAAGT  144

seq1  TGTTCTTAAGCATGGGTGTAGCAGGTTATATCACCATAGCAACAAATGTC  193
      ||||||  ||||||||||||||||| ||||||||||||||||||||||||
seq2  TGTTCT--AGCATGGGTGTAGCAGG-TATATCACCATAGCAACAAATGTC  191

seq1  TCCAGTGCTTTGAATTTGGGTGAGAATTGTTAACTGTGGTGGTTTGAGTG  243
      |||||||| ||||| ||||||||||||||||||||||||||| |||||||
seq2  TCCAGTGC-TTGAA-TTGGGTGAGAATTGTTAACTGTGGTGG-TTGAGTG  238

seq1  AGAAGACCCCCATGGGCTCATATATATTGGATGCTTGGTAACCAGGAAGT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACCCCCATGGGCTCATATATATTGGATGCTTGGTAACCAGGAAGT  288

seq1  GGAACTGTTGGAAAATATTAGGAAGCGTGGCCTCCTTGGAGTAGCTGTGG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGTTGGAAAATATTAGGAAGCGTGGCCTCCTTGGAGTAGCTGTGG  338

seq1  GACTGGAGGAGGTATGTCACTGGAAGAAGCCCTTGAGATTTCAAAAGCCG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGAGGAGGTATGTCACTGGAAGAAGCCCTTGAGATTTCAAAAGCCG  388

seq1  ACACCAGGCCCAGTCCTTCATGCAGATCAGGATGTAACTCTTAGCTACTC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGGCCCAGTCCTTCATGCAGATCAGGATGTAACTCTTAGCTACTC  438

seq1  CTCCAGCCTGGCTGCATGTGGCTGCCATATACCTGCTTTCATTTGGAAGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCCTGGCTGCATGTGGCTGCCATATACCTGCTTTCATTTGGAAGA  488

seq1  GTTGTCGTGGTCATGGTGCCTTGTAACAGCATAAGAACAGTAATATATAC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCGTGGTCATGGTGCCTTGTAACAGCATAAGAACAGTAATATATAC  538

seq1  ATTAACTTATATAGTTCATTTGTCCTACTCCTGCTGGGATCAGTGTTCCA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTTATATAGTTCATTTGTCCTACTCCTGCTGGGATCAGTGTTCCA  588

seq1  TGTGAACCCTAATGCCTGGCCCCTTTGAATGAGCACAGTCTGGAAGCCCG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACCCTAATGCCTGGCCCCTTTGAATGAGCACAGTCTGGAAGCCCG  638

seq1  CCTGCCGTGGGCCTCTGGTCCTTACAGACAACATATCTTCCTTTAGAATC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCGTGGGCCTCTGGTCCTTACAGACAACATATCTTCCTTTAGAATC  688

seq1  AGTGGTCTAGATCTAAAACTTTTCATGGGCACACATTTCTGGTAAGAAAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCTAGATCTAAAACTTTTCATGGGCACACATTTCTGGTAAGAAAG  738

seq1  CACTGAATACACTCACCAGGATCCTTTAGTGAAGAAGACATAGAACCCAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAATACACTCACCAGGATCCTTTAGTGAAGAAGACATAGAACCCAT  788

seq1  TGTCTAAGGTGCTCATACTCAAAGAGCCATTTTGAGAGTTAAAAGCAGGT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAAGGTGCTCATACTCAAAGAGCCATTTTGAGAGTTAAAAGCAGGT  838

seq1  CACTGGTTGCCTATAAAGCACATGGGACTTGAGTTAATATATGGCTTCCT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGTTGCCTATAAAGCACATGGGACTTGAGTTAATATATGGCTTCCT  888

seq1  GCAAAAGACATGTAAGAACCATTTATAAAGAGCAAAAAGAGAGGGAAAGG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAGACATGTAAGAACCATTTATAAAGAGCAAAAAGAGAGGGAAAGG  938

seq1  GGGTTGGGGAAGAGATCTAAAAATTGGGAAGATCAGGAACTTGAATGAAG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGGGGAAGAGATCTAAAAATTGGGAAGATCAGGAACTTGAATGAAG  988

seq1  GGGAGGTCAGGCCTCATCTTAGCAGGGATTGCCATTTCAAGACATTATCC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGTCAGGCCTCATCTTAGCAGGGATTGCCATTTCAAGACATTATCC  1038

seq1  AAAGTGTGGTGTGAGGCTCAGTGATGGAATACTTGCTAAACATGTATGAG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTGGTGTGAGGCTCAGTGATGGAATACTTGCTAAACATGTATGAG  1088

seq1  ACCCAGGTTCAACCTCTAACACATTTTAAAAAAAATGTATCCAGTATCTT  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGTTCAACCTCTAACACATTTTAAAAAAAATGTATCCAGTATCTT  1138

seq1  GCTTGTGGAGCTGGTGGAGCCCTGTGCTCAATTTCTTGAATTC  1186
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGGAGCTGGTGGAGCCCTGTGCTCAATTTCTTGAATTC  1181


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