MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-220I01
Chromosome	1 (Build37)	9 (Build37)
Map Location	195,226,997 - 195,228,013	117,613,077 - 117,613,352
singlet/doublet	singlet	singlet
Overlap gene	none
Upstream gene	Kcnh1, Hhat, A730013G03Rik, Sertad4, LOC100039677, Syt14, AA408296, Irf6, A130010J15Rik, Traf3ip3, Hsd11b1, G0s2, Lamb3, Camk1g
Downstream gene	LOC667208
Link	Open Mouse BAC browser

Click to get alignment info.

name	Kcnh1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16510 MGI:1341721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Hhat (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226861 MGI:2444681
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A730013G03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320952 MGI:2445118
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs

name	Sertad4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214791 MGI:2443496
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039677 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039677
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 ESTs, 6 Proteins pseudo : _no_value

name	Syt14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329324 MGI:2444490
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AA408296 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215193 MGI:2138080
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Irf6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54139 MGI:1859211
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A130010J15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319266 MGI:2441776
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Traf3ip3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215243 MGI:2441706
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hsd11b1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15483 MGI:103562
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	G0s2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14373 MGI:1316737
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lamb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16780 MGI:99915
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Camk1g (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215303 MGI:2388073
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667208 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667208
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Kcnh1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370338 GeneID:16510 MGI:1341721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, subfamily H (eag-related), member 1 transcript_id : NM_010600.2

name	Kcnh1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84370249 GeneID:16510 MGI:1341721
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, subfamily H (eag-related), member 1 transcript_id : NM_001038607.1

name	Hhat (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802754 GeneID:226861 MGI:2444681
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hedgehog acyltransferase transcript_id : NM_144881.3

name	Sertad4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38016191 GeneID:214791 MGI:2443496
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SERTA domain containing 4 transcript_id : NM_198247.1

name	Syt14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31581544 GeneID:329324 MGI:2444490
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : synaptotagmin XIV transcript_id : NM_181546.2

name	AA408296 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56790941 GeneID:215193 MGI:2138080
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AA408296 transcript_id : NM_145415.2

name	Irf6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114145466 GeneID:54139 MGI:1859211
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interferon regulatory factor 6 transcript_id : NM_016851.2

name	A130010J15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328434 GeneID:319266 MGI:2441776
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A130010J15 gene transcript_id : NM_181048.2

name	Traf3ip3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347101 GeneID:215243 MGI:2441706
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TRAF3 interacting protein 3 transcript_id : NM_153137.3

name	Hsd11b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113680740 GeneID:15483 MGI:103562
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxysteroid 11-beta dehydrogenase 1 transcript_id : NM_008288.2

name	Hsd11b1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113680660 GeneID:15483 MGI:103562
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxysteroid 11-beta dehydrogenase 1 transcript_id : NM_001044751.1

name	G0s2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372632 GeneID:14373 MGI:1316737
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G0/G1 switch gene 2 transcript_id : NM_008059.2

name	Lamb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113865980 GeneID:16780 MGI:99915
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : laminin, beta 3 transcript_id : NM_008484.2

name	Camk1g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:92110041 GeneID:215303 MGI:2388073
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium/calmodulin-dependent protein kinase I gamma transcript_id : NM_144817.2

name	Kcnh1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754422 CCDS:CCDS15627.1 GeneID:16510 MGI:1341721
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005516 - calmodulin binding [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0000155 - two-component sensor activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; ether-a-go-go; ether a go-go; potassium voltage-gated channel, subfamily H, member 1 product : potassium voltage-gated channel, subfamily H, member 1 isoform 1 protein_id : NP_034730.1

name	Kcnh1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370250 GeneID:16510 MGI:1341721
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005516 - calmodulin binding [Evidence IEA]; GO:0005267 - potassium channel activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0000155 - two-component sensor activity [Evidence IEA]; GO:0005244 - voltage-gated ion channel activity [Evidence IEA] GO_process : GO:0006813 - potassium ion transport [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0000160 - two-component signal transduction system (phosphorelay) [Evidence IEA] codon_start : 1 note : potassium voltage-gated channel, subfamily H (eag-related), member 1 (MGD\|MGI:1341721 GB\|NM_010600, evidence: BLASTN, 99%, match=2867); putative; isoform 2 is encoded by transcript variant 2; ether-a-go-go; ether a go-go; potassium voltage-gated channel, subfamily H, member 1 product : potassium voltage-gated channel, subfamily H, member 1 isoform 2 protein_id : NP_001033696.1

name	Hhat (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559954 CCDS:CCDS15628.1 GeneID:226861 MGI:2444681
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016409 - palmitoyltransferase activity [Evidence IMP]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0018345 - protein palmitoylation [Evidence IMP]; GO:0007224 - smoothened signaling pathway [Evidence IMP] codon_start : 1 product : hedgehog acyltransferase protein_id : NP_659130.2

name	Sertad4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38016192 CCDS:CCDS15630.1 GeneID:214791 MGI:2443496
definition	codon_start : 1 product : SERTA domain containing 4 protein_id : NP_937890.1

name	Syt14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559805 GeneID:329324 MGI:2444490
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005544 - calcium-dependent phospholipid binding [Evidence IDA]; GO:0005543 - phospholipid binding [Evidence IDA]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IDA] codon_start : 1 product : synaptotagmin XIV protein_id : NP_853524.1

name	AA408296 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56790942 CCDS:CCDS15631.1 GeneID:215193 MGI:2138080
definition	codon_start : 1 product : digestive-organ expansion factor homolog protein_id : NP_663390.2

name	Irf6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114145467 CCDS:CCDS15632.1 GeneID:54139 MGI:1859211
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : interferon regulatory factor 6 protein_id : NP_058547.2

name	A130010J15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794524 CCDS:CCDS15633.1 GeneID:319266 MGI:2441776
definition	codon_start : 1 product : hypothetical protein LOC319266 protein_id : NP_851391.1

name	Traf3ip3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981967 CCDS:CCDS15634.1 GeneID:215243 MGI:2441706
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : TRAF3-interacting Jun N-terminal kinase (JNK)-activating modulator product : TRAF3-interacting JNK-activating modulator protein_id : NP_694777.2

name	Hsd11b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113680661 GeneID:15483 MGI:103562
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IEA] GO_function : GO:0003845 - 11-beta-hydroxysteroid dehydrogenase activity [Evidence IDA] [Evidence IMP]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006629 - lipid metabolism [Evidence IEA]; GO:0030324 - lung development [Evidence IMP]; GO:0008152 - metabolism [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IEA] codon_start : 1 note : 11beta-HSD-1; 11beta-hydroxysteroid dehydrogenase type 1 product : hydroxysteroid 11-beta dehydrogenase 1 protein_id : NP_001038216.1

name	Hsd11b1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113680741 CCDS:CCDS15635.1 GeneID:15483 MGI:103562
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IEA] GO_function : GO:0003845 - 11-beta-hydroxysteroid dehydrogenase activity [Evidence IDA] [Evidence IMP]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006629 - lipid metabolism [Evidence IEA]; GO:0030324 - lung development [Evidence IMP]; GO:0008152 - metabolism [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IEA] codon_start : 1 note : 11beta-HSD-1; 11beta-hydroxysteroid dehydrogenase type 1 product : hydroxysteroid 11-beta dehydrogenase 1 protein_id : NP_032314.2

name	G0s2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679889 CCDS:CCDS15636.1 GeneID:14373 MGI:1316737
definition	GO_process : GO:0007049 - cell cycle [Evidence IEA] codon_start : 1 product : G0/G1 switch gene 2 protein_id : NP_032085.1

name	Lamb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865981 CCDS:CCDS15637.1 GeneID:16780 MGI:99915
definition	GO_component : GO:0005605 - basal lamina [Evidence IEA]; GO:0005604 - basement membrane [Evidence IEA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005201 - extracellular matrix structural constituent [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA] codon_start : 1 note : nicein, 125kD; nicein, 125kDa product : laminin, beta 3 protein_id : NP_032510.2

name	Camk1g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450191 CCDS:CCDS15638.1 GeneID:215303 MGI:2388073
definition	GO_component : GO:0005954 - calcium- and calmodulin-dependent protein kinase complex [Evidence IDA]; GO:0012505 - endomembrane system [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0004685 - calcium- and calmodulin-dependent protein kinase activity [Evidence IDA]; GO:0005516 - calmodulin binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : CLICK III product : calcium/calmodulin-dependent protein kinase I gamma protein_id : NP_659066.1

name	LOC667208 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667208
definition	number : 1 pseudo : _no_value

name	LOC667208 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667208
definition	number : 2 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:128881
definition	standard_name : D1Mit510

name	(CDS detail)
type	STS
link
xref	UniSTS:125644
definition	standard_name : U04294

name	(CDS detail)
type	STS
link
xref	UniSTS:158908
definition	standard_name : U04294

name	(CDS detail)
type	STS
link
xref	UniSTS:143657
definition	standard_name : Kcnh1

name	(CDS detail)
type	STS
link
xref	UniSTS:234315
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234314
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128552
definition	standard_name : D1Mit210

name	(CDS detail)
type	STS
link
xref	UniSTS:164143
definition	standard_name : AI851948

name	(CDS detail)
type	STS
link
xref	UniSTS:215751
definition	standard_name : RH132468

name	(CDS detail)
type	STS
link
xref	UniSTS:128646
definition	standard_name : D1Mit293

name	(CDS detail)
type	STS
link
xref	UniSTS:123324
definition	standard_name : 16.MMHAP90FRF7.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:162538
definition	standard_name : RH125792

name	(CDS detail)
type	STS
link
xref	UniSTS:165138
definition	standard_name : AW045375

name	(CDS detail)
type	STS
link
xref	UniSTS:178557
definition	standard_name : AI876454

name	(CDS detail)
type	STS
link
xref	UniSTS:207275
definition	standard_name : BE196897

name	(CDS detail)
type	STS
link
xref	UniSTS:165137
definition	standard_name : AI115021

name	(CDS detail)
type	STS
link
xref	UniSTS:125871
definition	standard_name : X83202

name	(CDS detail)
type	STS
link
xref	UniSTS:178555
definition	standard_name : X83202

name	(CDS detail)
type	STS
link
xref	UniSTS:128883
definition	standard_name : D1Mit512

name	(CDS detail)
type	STS
link
xref	UniSTS:178556
definition	standard_name : AV006465

name	(CDS detail)
type	STS
link
xref	UniSTS:492227
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:210014
definition	standard_name : RH136018

name	(CDS detail)
type	STS
link
xref	UniSTS:143753
definition	standard_name : Lamb3

name	(CDS detail)
type	STS
link
xref	UniSTS:125748
definition	standard_name : U43298

name	(CDS detail)
type	STS
link
xref	UniSTS:143754
definition	standard_name : Lamb3

name	(CDS detail)
type	STS
link
xref	UniSTS:26211
definition	standard_name : D12S345

name	(CDS detail)
type	STS
link
xref	UniSTS:128492
definition	standard_name : D1Mit154

name	(CDS detail)
type	STS
link
xref	UniSTS:226537
definition	standard_name : D13Rat161

name	A730013G03Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149247504 GeneID:320952 MGI:2445118
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs product : RIKEN cDNA A730013G03 gene transcript_id : XR_035377.1

name	LOC100039677 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149247497 GeneID:100039677
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 ESTs, 6 Proteins product : similar to hCG1789691 pseudo : _no_value transcript_id : XR_031150.1

clone name	MSMg01-530O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-113M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313I04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-220I01.b	B6Ng01-220I01.g
ACC	GA036044	GA036045
length	1,046	163
definition	B6Ng01-220I01.b	B6Ng01-220I01.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(195,226,997 - 195,228,013)	(117,613,077 - 117,613,352)
sequence	gaattcattggtgtttctcttgacaggagttaagttttttgtgtgaggaa gggacttagtcagtgttagcaggatttttcagtgggaaaggactcctttg atggctgtgttctggtgggtctcaggtttgcttggctgcagactcactac atacaggagatgataatggctgctgggcttctgcgtccagccacgcctct tctaccagctaattcttgcacattttggctttttgtttgagtccttggga gacttctaaggagagctagaggagacataactcaccacagggcatagact ggatcgacatagacgagacagacaccaaggagtggtgggcagctggaggg cacacactcggcggggccttgaggagtgtggatgcttctctgcatggctg ctgtgcttttatctctcctgagcatcagcaactaaacagaaagtacaatt gttgtgtcgcccatgatattaaacgcatgattgatggtttggactgaacg gctcaggtgttggcatttctgagtttcaataagtggaggcttatgagttt atgtcagacgtgctcagaaacacctggaagaatatggtttcacgaggtgt gaaaagatgctttctgctgcttctgtgcttgaatatgcatgtgctgtggc ccatgctgggggtggcggagatgtgggtcctgaagtgccaggttagagat gggtgggaacaggtttttctgctagaggctgttaatatggacactgatga cagacaatgtggaaaactacatagtgtttgcaatgttttgcaaatgtatt tggataagaagatttgggagcacactcatgtaaggtctctctctctctct ctctctctctctctcacacacacacacacacacacacacacacacacaca cacacatacacacacacacacacacatacacgcgtgcgtgtgcggcgtga agaaatggcattgggggtgtctccagtctgcttcaggagttcctctcaat tattccattgcctccccgtggctgtaatgggccagaaccctggggg	actctaggctggatgctgagaagggaagtctgagactaatggggttcaaa ctccttttaagtatgtttctctctctctctctctctctctctctctctct ctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt gtgtgtgtatgtg
quality values	Open. Hide. 58 33 33 26 58 41 19 42 58 58 47 41 47 47 62 62 62 62 62 62 62 62 47 51 32 62 62 47 46 62 62 51 47 51 46 46 38 38 62 62 59 59 59 59 62 62 62 62 49 62 59 62 62 46 43 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 54 59 59 62 62 62 62 49 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 49 54 54 62 59 59 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 35 43 62 59 62 62 62 62 62 62 59 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 54 49 56 62 62 62 62 62 62 62 62 62 56 62 62 49 54 62 62 62 62 62 62 47 62 62 62 62 54 45 62 62 62 62 62 62 62 62 62 62 62 25 34 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 54 52 58 58 58 58 54 58 58 58 58 28 58 58 58 58 58 54 58 58 46 58 58 54 54 53 58 58 58 54 46 58 52 58 58 58 58 58 54 46 50 58 58 52 54 52 54 58 58 58 58 54 58 42 58 39 42 52 42 58 49 42 58 58 54 46 42 54 58 39 58 54 58 52 58 58 58 49 58 50 45 26 54 58 51 58 49 54 58 58 50 58 51 51 58 47 48 53 58 52 58 58 58 51 51 58 47 49 53 53 58 50 42 50 58 53 53 58 50 58 46 49 41 23 58 49 40 50 58 58 53 50 49 44 44 44 43 49 58 22 43 42 58 18 46 23 49 40 53 58 54 46 50 58 52 51 37 36 37 52 50 32 46 33 25 58 52 52 49 34 58 50 35 33 49 58 50 39 58 58 40 49 34 31 25 50 53 28 58 58 58 50 52 50 32 29 37 35 32 53 23 54 31 53 51 40 54 32 53 42 42 29 44 40 40 37 27 41 38 49 35 32 45 53 31 37 47 39 33 26 44 32 54 32 34 34 54 54 54 52 39 42 34 45 34 39 45 30 31 51 27 54 37 39 40 37 42 38 54 24 54 54 27 42 40 37 51 32 37 45 23 31 53 54 47 52 51 34 31 28 44 26 51 47 23 11 6 49 33 22 46 27 47 23 32 31 32 31 33 52 37 31 23 33 36 25 25 32 49 32 31 47 46 38 21 51 28 28 32 31 26 35 41 51 31 33 27 31 23 51 25 46 14 51 30 40 13 19 24 30 27 51 31 35 31 31 30 25 23 20 18 19 27 18 19 17 21 30 21 27 16 12 15 9 16 15 42 30 36 27 31 31 42 31 25 25 43 30 32 19 42 18 22 6 16 15 42 29 43 26 32 10 18 9 23 12 32 19 31 16 31 21 31 5 25 38 30 29 30 38 31 26 31 38 31 33 17 6 6 19 11 12 31 22 11 11 25 46 21 21 20 31 15 10 11 22 12 22 29 41 7 8 22 30 33 22 28 11 18 12 17 30 27 23 13 8 8 19 31 13 34 10 25 21 24 26 7 8 16 14 11 17 21 11 21 27 29 22 18 15 26 31 12 29 23 18 21 19 36 32 10 15 9 30 19 13 7 6 6 8 6 7 11 24 11 7 7 7 5 8 33 12 31 11 6 7 20 33 25 27	Open. Hide. 59 59 62 62 62 48 46 54 43 43 42 43 33 54 62 62 62 62 59 59 54 49 42 49 49 54 62 62 62 62 54 49 54 54 54 59 59 62 62 62 62 62 62 62 54 54 62 59 62 62 62 62 54 62 62 62 62 54 62 62 62 62 62 54 54 54 62 62 62 62 54 42 42 42 42 42 62 62 62 62 62 62 54 54 54 54 54 54 54 42 42 54 42 42 54 62 62 59 62 62 62 59 59 59 62 59 59 62 62 54 62 54 62 62 62 62 62 56 62 59 62 48 54 48 54 48 56 54 54 48 54 48 48 48 54 40 43 48 56 46 56 38 50 13 35 18 30 16 31 30 39 16 31 23 39 30 34 27 13 27 19 10 12

Alignment Information

BAC End 1

BAC End 2

seq1: chr1_195226997_195228013
seq2: B6Ng01-220I01.b_44_1069

seq1  GAATTCATTGGTGTTTCTCTTGACAGGAGTTAAGTTTTTTGTGTGAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGGTGTTTCTCTTGACAGGAGTTAAGTTTTTTGTGTGAGGAA  50

seq1  GGGACTTAGTCAGTGTTAGCAGGATTTTTCAGTGGGAAAGGACTCCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTTAGTCAGTGTTAGCAGGATTTTTCAGTGGGAAAGGACTCCTTTG  100

seq1  ATGGCTGTGTTCTGGTGGGTCTCAGGTTTGCTTGGCTGCAGACTCACTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTGTGTTCTGGTGGGTCTCAGGTTTGCTTGGCTGCAGACTCACTAC  150

seq1  ATACAGGAGATGATAATGGCTGCTGGGCTTCTGCGTCCAGCCACGCCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGAGATGATAATGGCTGCTGGGCTTCTGCGTCCAGCCACGCCTCT  200

seq1  TCTACCAGCTAATTCTTGCACATTTTGGCTTTTTGTTTGAGTCCTTGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCAGCTAATTCTTGCACATTTTGGCTTTTTGTTTGAGTCCTTGGGA  250

seq1  GACTTCTAAGGAGAGCTAGAGGAGACATAACTCACCACAGGGCATAGACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTAAGGAGAGCTAGAGGAGACATAACTCACCACAGGGCATAGACT  300

seq1  GGATCGACATAGACGAGACAGACACCAAGGAGTGGTGGGCAGCTGGAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCGACATAGACGAGACAGACACCAAGGAGTGGTGGGCAGCTGGAGGG  350

seq1  CACACACTCGGCGGGGCCTTGAGGAGTGTGGATGCTTCTCTGCATGGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACTCGGCGGGGCCTTGAGGAGTGTGGATGCTTCTCTGCATGGCTG  400

seq1  CTGTGCTTTTATCTCTCCTGAGCATCAGCAACTAAACAGAAAGTACAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTTTTATCTCTCCTGAGCATCAGCAACTAAACAGAAAGTACAATT  450

seq1  GTTGTGTCGCCCATGATATTAAACGCATGATTGATGGTTTGGACTGAACG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTCGCCCATGATATTAAACGCATGATTGATGGTTTGGACTGAACG  500

seq1  GCTCAGGTGTTGGCATTTCTGAGTTTCAATAAGTGGAGGCTTATGAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGTGTTGGCATTTCTGAGTTTCAATAAGTGGAGGCTTATGAGTTT  550

seq1  ATGTCAGACGTGCTCAGAAACACCTGGAAGAATATGGTTTCACGAGGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGACGTGCTCAGAAACACCTGGAAGAATATGGTTTCACGAGGTGT  600

seq1  GAAAAGATGCTTTCTGCTGCTTCTGTGCTTGAATATGCATGTGCTGTGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGATGCTTTCTGCTGCTTCTGTGCTTGAATATGCATGTGCTGTGGC  650

seq1  CCATGCTGGGGGTGGCGGAGATGTGGGTCCTGAAGTGCCAGGTTAGAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTGGGGGTGGCGGAGATGTGGGTCCTGAAGTGCCAGGTTAGAGAT  700

seq1  GGGTGGGAACAGGTTTTTCTGCTAGAGGCTGTTAATATGGACACTGATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGAACAGGTTTTTCTGCTAGAGGCTGTTAATATGGACACTGATGA  750

seq1  CAGACAATGTGGAAAACTACATAGTGTTTGCAATGTTTTGCAAATGTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAATGTGGAAAACTACATAGTGTTTGCAATGTTTTGCAAATGTATT  800

seq1  TGGATAAGAAGATTTGGGAGCACACTCATGTAAGGTCTCTCTCTCTCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAAGAAGATTTGGGAGCACACTCATGTAAGGTCTCTCTCTCTCTCT  850

seq1  CTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACACA  900

seq1  CACACATACACACACACACACACACATACACGCGTGCGTGTGC-GCGTG-  948
      ||||||||||||||||||||||||||||||||||||||||||| ||||| 
seq2  CACACATACACACACACACACACACATACACGCGTGCGTGTGCGGCGTGA  950

seq1  AGAAATGGCATT--GGGTGTCTCCAGTCTGC-TCAGG-GTT-CTCTCAAT  993
      ||||||||||||  ||||||||||||||||| ||||| ||| ||||||||
seq2  AGAAATGGCATTGGGGGTGTCTCCAGTCTGCTTCAGGAGTTCCTCTCAAT  1000

seq1  TATTCCATTGC--TCCCGTGGCTGTA  1017
      |||||||||||   ||||||||||||
seq2  TATTCCATTGCCTCCCCGTGGCTGTA  1026

seq1: chr9_117613077_117613352
seq2: B6Ng01-220I01.g_138_233 (reverse)

seq1  CACATACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  50
                                                        
seq2  --------------------------------------------------  0

seq1  GAGAGAGACAGAGACAGAGACAGAGACAGAGAGATAGAGGCAGACAGAGA  100
                                                        
seq2  --------------------------------------------------  0

seq1  GACAGACAGAGAGACAGAGAGGTGACATCAACATACAGAGAGACATATGC  150
                                                        
seq2  --------------------------------------------------  0

seq1  AGAGAGATGTGTACACAGAAAGATGTGTATCCACACACACAGAGGAGAGA  200
                   |||            || |||||||||     | | |
seq2  -------------CAC------------ATACACACACAC-----ACACA  20

seq1  TACACACACACACACACACACACACACACACACACAGAGAGAGAGAGAGA  250
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACAGAGAGAGAGAGAGA  70

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGA  276
      ||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGA  96

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BAC

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Alignment Information