BAC Information

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BAC

Clone NameB6Ng01-225F10
Chromosome9 (Build37)
Map Location 19,006,931 - 19,008,063
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665567, Chordc1, Naalad2, B020006M18Rik, Map1lc3-ps, Mbd3l2, Zfp558, Mbd3l1, Muc16, Olfr24, Olfr828, Olfr829, Olfr830, Olfr831-ps1, Olfr832, GA_x5J8B7W6RL5-13870817-13871726, Olfr834, Olfr835, Olfr836, Olfr837, GA_x5J8B7W6RL5-13695863-13696754, Olfr839-ps1
Downstream geneGA_x5J8B7W6RL5-13645512-13646298, Olfr841-ps1, Olfr842-ps1, Olfr843, Olfr845, Olfr1522-ps1, Olfr846, LOC665697, Olfr847, GA_x5J8B7W6RL5-13451244-13452122, Olfr849, Olfr850, Olfr851, Olfr852-ps1, Olfr853, Olfr854, Olfr855, Zfp75, EG624341, LOC665751, Olfr857, Olfr858-ps1, Olfr58, Olfr859, Olfr860, GA_x5J8B7W6RL5-13004417-13003354, Olfr862, Olfr77, EG665823, Olfr863-ps1, Olfr864-ps1, Olfr865-ps1, Olfr866, Olfr867, Olfr868, Olfr869, Olfr870
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225F10.bB6Ng01-225F10.g
ACCGA039559GA039560
length9871,133
definitionB6Ng01-225F10.b B6Ng01-225F10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgatagaattttggggatcacttgtatatactaccatttaat
ctacaaagagtgagactttgccttcttcttttccaacttgtatcaccttg
atctccttctagtttccaattgctttagttagaaattcaaatagtatatt
gactagatagtaagagagcggtcagtattgtcttgtccctaattttaaca
ggattgcttcaagtttctttccgtttaagttgatgttgactgttggcttg
ctgtatattggttttaatatgtttaggtatgtgcattgaatttcaggtaa
atccaagatatgaaggggtgttgtattttgtcaaaggctcaatctgttat
ctgtctagaaaattatattcatttcatctagattttccagttttattgag
tataggcttttgtagtaagttctgaagttttctgaattttctttgctatg
tttctttgttatgtttcccttttcatttgtgagtgtattaattttaatac
tggctctgtatcctttatttagctaggctaagtttgggtatgctttatat
tcattttcattgagttgcataaagtctttgatttctttatttctttcctg
accatgttatcattgatcagagagttgttcagtttccatgactattcagg
gtttctggttttgatgtctagctttagttcatggtgatctgatagaatgc
atggtattatttcagtcttcttgtatctgttgagggtttttttttttttt
ttcactatacattcaattttggagacagttccatgaggtgttgagaaggt
tgtcttctcttgttttgaggtaaaacatttctgtagatttatgtaaaacc
atttggttcataacttctgttagtttcactgtgtttgtttagtttctgtt
ttcaaagacctgttcattggtcgaaagtagaatttctgaagtttcccact
tatattgtgtgagggtttagcgtgtgttcgagcttat
gaattctttgtttagctctgagccccattttctaatggggttttggcttc
agttatgtattctgtagttctttatatgttgaatccatttatttacagcc
tgaggaataaggacgtgaaacaaggcctgaggaaactcatcacaagagtt
ggggatcttttctcatgatatttgaattccacagaagaataacttaaatt
ttcaattttttttaaaactttgtaaaacattccctggagattgcaagaaa
atgcaatttggagaaggcatacagagaaagaactgatgaacaatttctgc
ctgattgcttggttagtaatgcaatgtttgaaaagtagaattactacata
tttaaagcaaacacttagattttacaatgtgttagaagattactatgaaa
tactcttgattaagaaacattttggagcagatatatctttaatgttcttc
atggtaagcaatcatgaatgtgtagtagtgacattataacagtgctcaga
tatgtttgataatacaagtcaatgaagaaacactcaataagtaaattaaa
cttatattaatatgaatgtttagggtggttacttttatcgtaatggtcga
taaaatgttaagaaatttaacttttttgatcttttaaattctacaatatt
agtaagttctttttcttttattgagtgcagtttttttttttttttcaata
caggtaatcctgattagttcctcatccctcaactcctcatattccttttc
aactccatttcagtacagatccacacatttcctgtctctcattatcaaat
gaactagcagtaaatgagatgaaaaaccatgaggaaagcatataaagatc
acacccacactctgtccactcacacccatacacaaaattgtgagttcaaa
tggtttgccagactcattaattaaatacttcatttatgggtgtctaattt
atggagtcaatatttataattattttttcctggaacaatgttactactct
atatctctcatgttaacattgtatactttaatccatgctgactgcaggat
ggagtgtctcttgattcaatggagttattggggggattggggctgtaaat
gatcatatggaatagcctaatgttcttacataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_19006931_19008063
seq2: B6Ng01-225F10.g_67_1199 (reverse)

seq1  TTATGTAAGAACTTTGGGCTATTCCTTTTGTTTTATTTACAGCCCAAATC  50
      |||||||||||| || ||||||||| | ||  | ||||||||||| ||||
seq2  TTATGTAAGAACATTAGGCTATTCCATATG-ATCATTTACAGCCCCAATC  49

seq1  CCCCC-ATAACTCAATGGAATTCA-AGACACTCATTCCTGCAGTTCAGCA  98
      ||||| ||||||| || ||||  | ||||||||  |||||||| ||||||
seq2  CCCCCAATAACTCCATTGAATCAAGAGACACTCCATCCTGCAG-TCAGCA  98

seq1  TGGATTAAAGTATACAATGTTAACATGAGAGAATATAGAGTAGTACCATT  148
      ||||||||||||||||||||||||||||||| ||||||||||||| ||||
seq2  TGGATTAAAGTATACAATGTTAACATGAGAG-ATATAGAGTAGTAACATT  147

seq1  GTT-CAGGAAAAAATAATTATAAAAATATTGACT-CATAAATTAGACA-C  195
      ||| |||||||||||||||||  ||||||||||| ||||||||||||| |
seq2  GTTCCAGGAAAAAATAATTAT--AAATATTGACTCCATAAATTAGACACC  195

seq1  CATAAATGAAGTATTTAATTAATGAGTCTGGCAAACCATTTGAACTCACA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATGAAGTATTTAATTAATGAGTCTGGCAAACCATTTGAACTCACA  245

seq1  ATTTTGTGTATGGGTGTGAGTGGACAGAGTGTGGGTGTGATCTTTATATG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTGTATGGGTGTGAGTGGACAGAGTGTGGGTGTGATCTTTATATG  295

seq1  CTTTCCTCATGGTTTTTCATCTCATTTACTGCTAGTTCATTTGATAATGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTCATGGTTTTTCATCTCATTTACTGCTAGTTCATTTGATAATGA  345

seq1  GAGACAGGAAATGTGTGGATCTGTACTGAAATGGAGTTGAAAAGGAATAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGGAAATGTGTGGATCTGTACTGAAATGGAGTTGAAAAGGAATAT  395

seq1  GAGGAGTTGAGGGATGAGGAACTAATCAGGATTACCTGTATTGAAAAAAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGTTGAGGGATGAGGAACTAATCAGGATTACCTGTATTGAAAAAAA  445

seq1  AAAAAAAACTGCACTCAATAAAAGAAAAAGAACTTACTAATATTGTAGAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACTGCACTCAATAAAAGAAAAAGAACTTACTAATATTGTAGAA  495

seq1  TTTAAAAGATCAAAAAAGTTAAATTTCTTAACATTTTATCGACCATTACG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGATCAAAAAAGTTAAATTTCTTAACATTTTATCGACCATTACG  545

seq1  ATAAAAGTAACCACCCTAAACATTCATATTAATATAAGTTTAATTTACTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGTAACCACCCTAAACATTCATATTAATATAAGTTTAATTTACTT  595

seq1  ATTGAGTGTTTCTTCATTGACTTGTATTATCAAACATATCTGAGCACTGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGTGTTTCTTCATTGACTTGTATTATCAAACATATCTGAGCACTGT  645

seq1  TATAATGTCACTACTACACATTCATGATTGCTTACCATGAAGAACATTAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATGTCACTACTACACATTCATGATTGCTTACCATGAAGAACATTAA  695

seq1  AGATATATCTGCTCCAAAATGTTTCTTAATCAAGAGTATTTCATAGTAAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATATCTGCTCCAAAATGTTTCTTAATCAAGAGTATTTCATAGTAAT  745

seq1  CTTCTAACACATTGTAAAATCTAAGTGTTTGCTTTAAATATGTAGTAATT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAACACATTGTAAAATCTAAGTGTTTGCTTTAAATATGTAGTAATT  795

seq1  CTACTTTTCAAACATTGCATTACTAACCAAGCAATCAGGCAGAAATTGTT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTTCAAACATTGCATTACTAACCAAGCAATCAGGCAGAAATTGTT  845

seq1  CATCAGTTCTTTCTCTGTATGCCTTCTCCAAATTGCATTTTCTTGCAATC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTTCTTTCTCTGTATGCCTTCTCCAAATTGCATTTTCTTGCAATC  895

seq1  TCCAGGGAATGTTTTACAAAGTTTTAAAAAAAATTGAAAATTTAAGTTAT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGAATGTTTTACAAAGTTTTAAAAAAAATTGAAAATTTAAGTTAT  945

seq1  TCTTCTGTGGAATTCAAATATCATGAGAAAAGATCCCCAACTCTTGTGAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGTGGAATTCAAATATCATGAGAAAAGATCCCCAACTCTTGTGAT  995

seq1  GAGTTTCCTCAGGCCTTGTTTCACGTCCTTATTCCTCAGGCTGTAAATAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTCCTCAGGCCTTGTTTCACGTCCTTATTCCTCAGGCTGTAAATAA  1045

seq1  ATGGATTCAACATATAAAGAACTACAGAATACATAACTGAAGCCAAAACC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATTCAACATATAAAGAACTACAGAATACATAACTGAAGCCAAAACC  1095

seq1  CCATTAGAAAATGGGGCTCAGAGCTAAACAAAGAATTC  1133
      ||||||||||||||||||||||||||||||||||||||
seq2  CCATTAGAAAATGGGGCTCAGAGCTAAACAAAGAATTC  1133