BAC Information

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BAC

Clone NameB6Ng01-225G19
Chromosome9 (Build37)
Map Location 47,078,916 - 47,203,322
singlet/doubletdoublet
Overlap genenone
Upstream geneApoa5, Zfp259, Bud13, 4931429L15Rik, LOC100042722, EG667890, 2900052N01Rik, D930036J05
Downstream geneCadm1, LOC100043303, D930028F11Rik, 4432416J03Rik
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225G19.bB6Ng01-225G19.g
ACCGA039621GA039622
length1,170471
definitionB6Ng01-225G19.b B6Ng01-225G19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,202,158 - 47,203,322)(47,078,916 - 47,079,392)
sequence
gaattccgtgtcctgcttgatgcagcatttggaggaaccccccccccatc
ccccaaagctcttgcttagtcattcagcacactcacacatttaaaacgac
tgcctcctctcttccctagctgccttttaacaaaacttcctgggttctac
agtgtaagcccctttgtctaagacttcttacaaagaaccctgggccaggc
tgaaaacatccgctgggattcaagagaggaggcctcagacagacgaggac
tctgaactttctgtaggaactgggaggagggaatctgggctcccaaaact
cactaagtgtcgctggggttctagacagtaagacaaggtcattttcccca
gcacgcgtagtgggcttaacggatcagaaaagtcctcctctgcacctgtc
tcttgacccggtttatctactcaaccatctaataaccattcactcaatgc
atattcatttcctgttttattctcctctgctctagtcctgagattcttac
atatagagaagaattggtacagggtgtgggacagttatgaaggggaagga
gtaatttgttccaacgatctggaacaaaccctgcagttttgtagtttttt
ccccttgcccaatttattgcatgagttattttctccttcctcccctcacc
ccttcttctctcccttttatccctccttcctactttccttgcccccacat
ctctctttacattcctcccttccttctttctaacagaatctcactatgta
aaccttatgcttggccttatgcttgaaatcctcccatttcctccttccaa
gtgcttgggttacaggtgctggccaccaggctcggcttcattctatgact
tctcagagcatcttaattatgtggcctttggaggagttggctcagctgct
gggcactgactttccagagtaggcatcggatctcagctcccagaaggcag
aaccctagctgcgccgctgacttgtacctggctcagcccagcttcttgat
cagtagatgcctgacagccggaagaacttgaatgaaggtgctttgtatcc
agcagcagttcccacttggcagtcagaattacaggcaattaatgcagcca
acaagcctcctgagtatccttataagttcaaggcactcccttccccaagc
ctccttgctgagatgggagg

caggatctgaggtctggataaatgaactcttgggaactcaaaggttcctc
actggtttgttttcagtaagataggatgttcggcacaagcatctagggta
gactggatttgactctagtttgcttaggtaagttactttaccgctccgct
gtgtgtcagtttctttcctgcaaattctggttaataacaacagactccca
gaggtactgtgattttatggggatgattaaattcactgacccattttcaa
atgtgtaggagaggatccaacagtattatcaacagtagcaagcttggttt
aagctctacctggaccaactgcattaaacctctacttcggggcattttgt
actcaatattagatgacccttaagttttctttactgtggtaaaatctatc
ttagttggtcaaagaaagaaaagggaaagggagggagggagtggaagaga
tgaaaaagagggaaggaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_47202158_47203322
seq2: B6Ng01-225G19.b_45_1214 (reverse)

seq1  CCTCCCATCTTCAGCAAGGAGGC-TGGGGAA-GGAGTGGCTTGGACTATT  48
      ||||||||| ||||||||||||| ||||||| |||||| |||| ||  ||
seq2  CCTCCCATC-TCAGCAAGGAGGCTTGGGGAAGGGAGTGCCTTGAAC--TT  47

seq1  AAAGGGATACTCAGAAG--CTGTTGGCTGCATTAAATG-CTGTAATTCTG  95
      | | |||||||||| ||   ||||||||||||||| || |||||||||||
seq2  ATAAGGATACTCAGGAGGCTTGTTGGCTGCATTAATTGCCTGTAATTCTG  97

seq1  ACTGCCAAGTGG--ACTGCTGCTTGGATACATAGCACC-TCATTCAAGTT  142
      ||||||||||||  |||||||| |||||||| |||||| |||||||||||
seq2  ACTGCCAAGTGGGAACTGCTGC-TGGATACAAAGCACCTTCATTCAAGTT  146

seq1  CTTCCGGCTGTCAGGCATCTACTGATCAAG-AGCTGGGCTGAGCCAGGTA  191
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTTCCGGCTGTCAGGCATCTACTGATCAAGAAGCTGGGCTGAGCCAGGTA  196

seq1  CAAGTCAGCGGCGCAGCTAGGGTTCTGCCTTCTGGGAGCTGAGATCCGAT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCAGCGGCGCAGCTAGGGTTCTGCCTTCTGGGAGCTGAGATCCGAT  246

seq1  GCCTACTCTGGAAAGTCAGTGCCCAGCAGCTGAGCCAACTCCTCCAAAGG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACTCTGGAAAGTCAGTGCCCAGCAGCTGAGCCAACTCCTCCAAAGG  296

seq1  CCACATAATTAAGATGCTCTGAGAAGTCATAGAATGAAGCCGAGCCTGGT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATAATTAAGATGCTCTGAGAAGTCATAGAATGAAGCCGAGCCTGGT  346

seq1  GGCCAGCACCTGTAACCCAAGCACTTGGAAGGAGGAAATGGGAGGATTTC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCACCTGTAACCCAAGCACTTGGAAGGAGGAAATGGGAGGATTTC  396

seq1  AAGCATAAGGCCAAGCATAAGGTTTACATAGTGAGATTCTGTTAGAAAGA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATAAGGCCAAGCATAAGGTTTACATAGTGAGATTCTGTTAGAAAGA  446

seq1  AGGAAGGGAGGAATGTAAAGAGAGATGTGGGGGCAAGGAAAGTAGGAAGG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGGAGGAATGTAAAGAGAGATGTGGGGGCAAGGAAAGTAGGAAGG  496

seq1  AGGGATAAAAGGGAGAGAAGAAGGGGTGAGGGGAGGAAGGAGAAAATAAC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATAAAAGGGAGAGAAGAAGGGGTGAGGGGAGGAAGGAGAAAATAAC  546

seq1  TCATGCAATAAATTGGGCAAGGGGAAAAAACTACAAAACTGCAGGGTTTG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCAATAAATTGGGCAAGGGGAAAAAACTACAAAACTGCAGGGTTTG  596

seq1  TTCCAGATCGTTGGAACAAATTACTCCTTCCCCTTCATAACTGTCCCACA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGATCGTTGGAACAAATTACTCCTTCCCCTTCATAACTGTCCCACA  646

seq1  CCCTGTACCAATTCTTCTCTATATGTAAGAATCTCAGGACTAGAGCAGAG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTACCAATTCTTCTCTATATGTAAGAATCTCAGGACTAGAGCAGAG  696

seq1  GAGAATAAAACAGGAAATGAATATGCATTGAGTGAATGGTTATTAGATGG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATAAAACAGGAAATGAATATGCATTGAGTGAATGGTTATTAGATGG  746

seq1  TTGAGTAGATAAACCGGGTCAAGAGACAGGTGCAGAGGAGGACTTTTCTG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTAGATAAACCGGGTCAAGAGACAGGTGCAGAGGAGGACTTTTCTG  796

seq1  ATCCGTTAAGCCCACTACGCGTGCTGGGGAAAATGACCTTGTCTTACTGT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGTTAAGCCCACTACGCGTGCTGGGGAAAATGACCTTGTCTTACTGT  846

seq1  CTAGAACCCCAGCGACACTTAGTGAGTTTTGGGAGCCCAGATTCCCTCCT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACCCCAGCGACACTTAGTGAGTTTTGGGAGCCCAGATTCCCTCCT  896

seq1  CCCAGTTCCTACAGAAAGTTCAGAGTCCTCGTCTGTCTGAGGCCTCCTCT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTCCTACAGAAAGTTCAGAGTCCTCGTCTGTCTGAGGCCTCCTCT  946

seq1  CTTGAATCCCAGCGGATGTTTTCAGCCTGGCCCAGGGTTCTTTGTAAGAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATCCCAGCGGATGTTTTCAGCCTGGCCCAGGGTTCTTTGTAAGAA  996

seq1  GTCTTAGACAAAGGGGCTTACACTGTAGAACCCAGGAAGTTTTGTTAAAA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGACAAAGGGGCTTACACTGTAGAACCCAGGAAGTTTTGTTAAAA  1046

seq1  GGCAGCTAGGGAAGAGAGGAGGCAGTCGTTTTAAATGTGTGAGTGTGCTG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCTAGGGAAGAGAGGAGGCAGTCGTTTTAAATGTGTGAGTGTGCTG  1096

seq1  AATGACTAAGCAAGAGCTTTGGGGGATGGGGGGGGGGTTCCTCCAAATGC  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTAAGCAAGAGCTTTGGGGGATGGGGGGGGGGTTCCTCCAAATGC  1146

seq1  TGCATCAAGCAGGACACGGAATTC  1165
      ||||||||||||||||||||||||
seq2  TGCATCAAGCAGGACACGGAATTC  1170


seq1: chr9_47078916_47079392
seq2: B6Ng01-225G19.g_64_540

seq1  GAATTCCAGGATCTGAGGTCTGGATAAATGAACTCTTGGGAACTCAAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGATCTGAGGTCTGGATAAATGAACTCTTGGGAACTCAAAGG  50

seq1  TTCCTCACTGGTTTGTTTTCAGTAAGATAGGATGTTCGGCACAAGCATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCACTGGTTTGTTTTCAGTAAGATAGGATGTTCGGCACAAGCATCT  100

seq1  AGGGTAGACTGGATTTGACTCTAGTTTGCTTAGGTAAGTTACTTTACCGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAGACTGGATTTGACTCTAGTTTGCTTAGGTAAGTTACTTTACCGC  150

seq1  TCCGCTGTGTGTCAGTTTCTTTCCTGCAAATTCTGGTTAATAACAACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCTGTGTGTCAGTTTCTTTCCTGCAAATTCTGGTTAATAACAACAGA  200

seq1  CTCCCAGAGGTACTGTGATTTTATGGGGATGATTAAATTCACTGACCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAGAGGTACTGTGATTTTATGGGGATGATTAAATTCACTGACCCAT  250

seq1  TTTCAAATGTGTAGGAGAGGATCCAACAGTATTATCAACAGTAGCAAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATGTGTAGGAGAGGATCCAACAGTATTATCAACAGTAGCAAGCT  300

seq1  TGGTTTAAGCTCTACCTGGACCAACTGCATTAAACCTCTACTTCGGGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTAAGCTCTACCTGGACCAACTGCATTAAACCTCTACTTCGGGGCA  350

seq1  TTTTGTACTCAATATTAGATGACCCTTAAGTTTTCTTTACTGTGGTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTACTCAATATTAGATGACCCTTAAGTTTTCTTTACTGTGGTAAAA  400

seq1  TCTATCTTAGTTGGTCAAAGAAAGAAAAGGGAAAGGGAGGGAGGGAGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTTAGTTGGTCAAAGAAAGAAAAGGGAAAGGGAGGGAGGGAGTGG  450

seq1  AAGAGATGAAAAAGAGGGAAGGAAGGA  477
      |||||||||||||||||||||||||||
seq2  AAGAGATGAAAAAGAGGGAAGGAAGGA  477


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