BAC Information

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BAC

Clone NameB6Ng01-226L14
Chromosome9 (Build37)
Map Location 37,739,006 - 37,740,115
singlet/doubletsinglet
Overlap genenone
Upstream genePknox2, LOC100042545, 1810021J13Rik, Slc37a2, LOC100042561, Ccdc15, Hepacam, Robo4, Robo3, BC024479, Esam1, Vsig2, Nrgn, Spa17, Siae, Tbrg1, Panx3, LOC666881, EG627798, Olfr160, Olfr151, Olfr874, Olfr875, Olfr876, Olfr877, Olfr145, EG627852, Olfr878
Downstream geneGA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226L14.bB6Ng01-226L14.g
ACCGA040584GA040585
length1,2021,113
definitionB6Ng01-226L14.b B6Ng01-226L14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccctttgtggactgagcactcaccatttcttattctctccctatt
gattagctattgatatctggattaatgtcaacttattgctaaaagatgat
ctctggtgaaggctgagagatgcatcaatctatcagtgtagtggaaaagc
attaggaatcaagttaatactttatccataacaggtaatagacatagata
cttccctatgacctattaaactcatctagcctgagaagttgctcccaaca
agcatggttggagtgaattttgtctgtggagcaaacctgaaatccaaccc
aaatattgttggctactcctataatatttatgtcaacattgtaccagtgg
gtatgtcctaccaggtcagccattaatgtaactgtcatgatacacatata
cacacatatagactggacacagatatttatatcatagtgagaaacatttt
aaatgtatacttagatcaaagaaaatttaaatttaaattttgagattctg
actgtgatactagtagtcagtgctttatgaagactagactattagtttat
cataattccattaattaatatattgaaactctgaactttgaatgtcttaa
acatcatatatcacttgtaagtttatttacttatgttcatattctagtca
tttcccccactcttacaatttgcatttacatgccattagtcattttctta
gaccctcataactgacttaagctttcaaatcctccatagattcaacttat
cctccctagtcccaggtctccagctgacacagatgacccccacagattcc
catccccactcctaccattgcccaacccctactttgacacctgatcacca
tctcgtttccactcctcattcactctcccactaagttccctctctctatt
tgtctctgatgactattttgtttccccttctgagtgagactcttgcatcc
ttctttgggttctccttacagcccaggttctttggatcttggattatagc
atggttatcctgcacttcatggctaacgaccacatatactatccacaacc
catacacatctttttgggtctgggcgatccccacctccgatgatattcta
gttccatcaattgcctgcaatcatattatgttaaaggttcatagattcca
ctatgtagaatttaccacatttccgttacctactctcttccattggaagg
tc
gaattctcggaaggaaggaagtagatttgtgggagaactggtaaaggaat
ggcaacagagaaaagactggcatggaaatgatcctgattcccatatggta
atctggagcaatgactgccagtgagcgtgaaagaactgccacataaatga
tgtcctgaatctattagtggaaggtacccgcctttgttttgatatcaaag
aggacatgtgtacatatccttaagagatctgtccttgttggtgggcaaac
aaagctgtctacaaagaagtgttaagtcattgtttgcttttagcaacagc
accgaaaaggctgagaaatgggatgatgttaaattttacacagacactgt
atgtagctgaatatgtgctttgtgtcataaaactttgtatattgaaataa
aataagtacaaatatttcctaatgtagtggagttaaataggatttggggg
taagaatacacaaataacagaatccattttatttacacaatttaaagagc
cttaagcatgtataaaatttaaattctcattaaatgatcttaacatgggt
atgaaaacatattttactggaaatatttaggctaccaattgttctggtaa
gcatttaaaaccagagaacacagaaattaaaaccatcttttatgtaattg
tggattaatcaaatcattcattccgcatttatcatgtttctagtgtgtta
tgtgactaggtgctaggattcggcaggaatcaatatatcaaaaagtactt
aagagtacttaaaagagtgaacatttcagttaacagttatgctgcactca
ttttttggtaccttgtttgtattatgattgtcatgtcttttctattttgt
ctctttttttttctttttgtttgttttcccgagacagggtttctctggat
agccctggctgtcctggaactcactttgtggacaggctggactcgaacct
cagaaatcccgcctgcctcctaccttcccaagtgtctggggattaaggtg
gtggtgcccaccagccccgcttgttctttttttcactaggcaatttagac
agtgccaattagaattgctaaattaaatgcattcaacctttaatttaatg
atgatctaagaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_37739006_37740115
seq2: B6Ng01-226L14.g_65_1177

seq1  GAATTCTCGGAAGGAAGGAAGTAGATTTGTGGGAGAACTGGTAAAGGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCGGAAGGAAGGAAGTAGATTTGTGGGAGAACTGGTAAAGGAAT  50

seq1  GGCAACAGAGAAAAGACTGGCATGGAAATGATCCTGATTCCCATATGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAACAGAGAAAAGACTGGCATGGAAATGATCCTGATTCCCATATGGTA  100

seq1  ATCTGGAGCAATGACTGCCAGTGAGCGTGAAAGAACTGCCACATAAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGAGCAATGACTGCCAGTGAGCGTGAAAGAACTGCCACATAAATGA  150

seq1  TGTCCTGAATCTATTAGTGGAAGGTACCCGCCTTTGTTTTGATATCAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGAATCTATTAGTGGAAGGTACCCGCCTTTGTTTTGATATCAAAG  200

seq1  AGGACATGTGTACATATCCTTAAGAGATCTGTCCTTGTTGGTGGGCAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATGTGTACATATCCTTAAGAGATCTGTCCTTGTTGGTGGGCAAAC  250

seq1  AAAGCTGTCTACAAAGAAGTGTTAAGTCATTGTTTGCTTTTAGCAACAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGTCTACAAAGAAGTGTTAAGTCATTGTTTGCTTTTAGCAACAGC  300

seq1  ACCGAAAAGGCTGAGAAATGGGATGATGTTAAATTTTACACAGACACTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAAAAGGCTGAGAAATGGGATGATGTTAAATTTTACACAGACACTGT  350

seq1  ATGTAGCTGAATATGTGCTTTGTGTCATAAAACTTTGTATATTGAAATAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGCTGAATATGTGCTTTGTGTCATAAAACTTTGTATATTGAAATAA  400

seq1  AATAAGTACAAATATTTCCTAATGTAGTGGAGTTAAATAGGATTTGGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTACAAATATTTCCTAATGTAGTGGAGTTAAATAGGATTTGGGGG  450

seq1  TAAGAATACACAAATAACAGAATCCATTTTATTTACACAATTTAAAGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATACACAAATAACAGAATCCATTTTATTTACACAATTTAAAGAGC  500

seq1  CTTAAGCATGTATAAAATTTAAATTCTCATTAAATGATCTTAACATGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGCATGTATAAAATTTAAATTCTCATTAAATGATCTTAACATGGGT  550

seq1  ATGAAAACATATTTTACTGGAAATATTTAGGCTACCAATTGTTCTGGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAACATATTTTACTGGAAATATTTAGGCTACCAATTGTTCTGGTAA  600

seq1  GCATTTAAAACCAGAGAACACAGAAATTAAAACCATCTTTTATGTAATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTAAAACCAGAGAACACAGAAATTAAAACCATCTTTTATGTAATTG  650

seq1  TGGATTAATCAAATCATTCATTCCGCATTTATCATGTTTCTAGTGTGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTAATCAAATCATTCATTCCGCATTTATCATGTTTCTAGTGTGTTA  700

seq1  TGTGACTAGGTGCTAGGATTCGGCAGGAATCAATATATCAAAAAGTACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTAGGTGCTAGGATTCGGCAGGAATCAATATATCAAAAAGTACTT  750

seq1  AAGAGTACTTAAAAGAGTGAACA-TTCAGTTAACAGTTATGCTGCACTCA  799
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAGAGTACTTAAAAGAGTGAACATTTCAGTTAACAGTTATGCTGCACTCA  800

seq1  TTTTTTGGTACCTTGTTTGTATTATGATTGTCATGTCTTTTCTATTTTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGTACCTTGTTTGTATTATGATTGTCATGTCTTTTCTATTTTGT  850

seq1  CTCTTTTTTTTTCTTTTTTGTTTTGTTTTTCCGAGACAGGGTTTCTCTGG  899
      ||||||||||||||||||   |||||||| ||||||||||||||||||||
seq2  CTCTTTTTTTTTCTTTTT--GTTTGTTTTCCCGAGACAGGGTTTCTCTGG  898

seq1  ATAGCCCTGGCTGTCCTGGAACTCACTTTGTGGACCAGGCTGGACTCGAA  949
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATAGCCCTGGCTGTCCTGGAACTCACTTTGTGGA-CAGGCTGGACTCGAA  947

seq1  -CTCAGAAAT-CCGCCTGCCT-CTACC-TCCCAAGTG-CTGGGATTAAAG  994
       ||||||||| |||||||||| ||||| ||||||||| |||||  | |||
seq2  CCTCAGAAATCCCGCCTGCCTCCTACCTTCCCAAGTGTCTGGGGATTAAG  997

seq1  GTG--TGTG-CCACCAGCCCCGCTTGT--CTTTTTTCACTAGGCAATTTA  1039
      |||   ||| |||||||||||||||||   ||||||||||||||||||||
seq2  GTGGTGGTGCCCACCAGCCCCGCTTGTTCTTTTTTTCACTAGGCAATTTA  1047

seq1  GACAGTGCCCATTAAGGATTTGC-AAATTAAATGCATTCAAACCTTTTAA  1088
      ||||||||| ||||  || |||| |||||||||||||||||  | |||||
seq2  GACAGTGCCAATTA--GAATTGCTAAATTAAATGCATTCAA--CCTTTAA  1093

seq1  TTTAAATGTTGATCTAAAGAAC  1110
      ||| |||| |||||| ||||||
seq2  TTT-AATGATGATCT-AAGAAC  1113