BAC Information

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BAC

Clone NameB6Ng01-227J19
Chromosome9 (Build37)
Map Location 74,290,951 - 74,292,107
singlet/doubletsinglet
Overlap genenone
Upstream geneUnc13c, Wdr72, Nr1h2-ps
Downstream geneLOC100040764, Onecut1, BC031353, Arpp19, LOC100040812, Myo5a, LOC677501, Myo5c, Gnb5, Bcl2l10, LOC384954, Mapk6, Leo1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-227J19.bB6Ng01-227J19.g
ACCGA041239GA041240
length1,1681,165
definitionB6Ng01-227J19.b B6Ng01-227J19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacatctaaattgccatcatcatgccctcctgctcccatggcaaa
ccagctgtgggtatctgaagcacacctgcctcattttgatgatccacctg
atcctttgcaaagacaaccagctcgacattgtgatttccacaatgtttat
ctttttggctatttcaacagaggatgtgtgtcccctgctgtagcttagct
cagatccacatgtcatcctgttgacctgttaaaaagcaatgtccagtaca
tttctgcttgcaaatggagcttgcttcagccacacaagcaactgaaacac
tgttttgttttgttttgttttgtttaaaaaaaaaaaaagaacattaggag
gaaaaagccctcccacatgtttgtaaggaatagacaacacctataagata
caacaacaaatcaaggcctttcaaattcccaaggttaaacaggtctcact
caaagttataatggttggtaagtggtactgcacctctattgaccatttac
ccagaagaattctcatacacttccttttaatgttggcttataaaacacat
tcaatcaaatactttcagaagtacatctagagcatgtcggccattttgaa
gcaatactaaatctgttttctactaaaacaaacaatgtcttttggggaaa
agaatcagaaatgtctttcagtattttttttttactctggtaaacattta
taagaccaggacatgaaaatgaaagggatttgttgttgttgttttaaatt
tccttaagggcatgtgatccttattgcaattgtacacagaaaactctcaa
gtgactttaatcctcctattggtggtgcagttcatcgcaatacaaaaaag
ggctgctacaatctacctgctatttacatggccccaaacaaatagaaaaa
acaacaaggagacatcacctaagtgtaggactgagcagttctagtgtgtt
tttttctcaatccctaaacctccaatttcaattcagggtttcatttgtca
gggaaaaagggactcctctggtggccccactggaattagaattcattcct
cagatctggtttaacaaatgctgctttctctaggtggaagccaaattggt
ccagtttgacttcccaaggcctgtgctgacttgcagagctacaagggttc
cctcatcactctggagtg
gaattcatacagttgaatccttcttaacagtctgctttacgggaaccttt
attaccgcgacccgcagttctggttctggaatgagggatcttccttgcgc
cagtcccgagttttttctcgtcccggaattcggcaccaattgttattaga
cgcgttctcacgaccggccaggaagaacaccacagaccagaatcttctgc
ggcaaagctttatttcttacatcttcaggagccagggtgcaggaagcaag
agagcaagaagcaagagagagagaaaacgaaaccccgtccctcttaagga
gcattctccttcgcctcggacgtgtcactccctgattggctgcagcccat
cggccgagttgacgtcacggggaaggcagagcacaagtagtcataagata
cccttggcacatgcgcagattatttgtttaccacttagaacacaggatgt
cagcgccatcttgtaacggcgaatgtgggggcggctcccaacaaggggca
tctgggttctttccagtttctggctattataagtaaggctgcaatgaaca
tagtggagcatgtgtccttcttaccagttggggcttcttctggatatatg
cccaggagaggtattgctggatcctccggtagtactatgtccaattttct
gaggaaccgccagactgatttccagagtggttgtacaagcctgcaatccc
accaagaatggaggagtgttcctctttctccacatcctcgccagcatctg
ctgtcacctgaatttttgatcttagccattctcactggtgtgaggtggaa
tctcagggttgttttgatttgcatttccctgatgattaaggatgttgaac
attttttcaggtgctttctctgccattcggtattcttcagtgagaattct
ttgttcagttctgagcctcattttttaagggggttatttgatttttcttg
gagttccaccttcttgagttcttttatatatgttggaatattagtcccct
attctgattaggataggtaagatccttcccaggtctgttggtggtctttt
agttcttatgacgtgtctttgcattgcagaatcttggagatttcattaag
gttccatttgtcaatctcgaatctacagccagcatgtcgatctgtttcag
gaaatctttttctcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_74290951_74292107
seq2: B6Ng01-227J19.b_45_1212

seq1  GAATTCACATCTAAATTGCCATCATCATGCCCTCCTGCTCCCATGGCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATCTAAATTGCCATCATCATGCCCTCCTGCTCCCATGGCAAA  50

seq1  CCAGCTGTGGGTATCTGAAGCACACCTGCCTCATTTTGATGATCCACCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGTGGGTATCTGAAGCACACCTGCCTCATTTTGATGATCCACCTG  100

seq1  ATCCTTTGCAAAGACAACCAGCTCGACATTGTGATTTCCACAATGTTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTGCAAAGACAACCAGCTCGACATTGTGATTTCCACAATGTTTAT  150

seq1  CTTTTTGGCTATTTCAACAGAGGATGTGTGTCCCCTGCTGTAGCTTAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGGCTATTTCAACAGAGGATGTGTGTCCCCTGCTGTAGCTTAGCT  200

seq1  CAGATCCACATGTCATCCTGTTGACCTGTTAAAAAGCAATGTCCAGTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCCACATGTCATCCTGTTGACCTGTTAAAAAGCAATGTCCAGTACA  250

seq1  TTTCTGCTTGCAAATGGAGCTTGCTTCAGCCACACAAGCAACTGAAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTTGCAAATGGAGCTTGCTTCAGCCACACAAGCAACTGAAACAC  300

seq1  TGTTTTGTTTTGTTTTGTTTTGTTTAAAAAAAAAAAAAGAACATTAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTTTGTTTTGTTTTGTTTAAAAAAAAAAAAAGAACATTAGGAG  350

seq1  GAAAAAGCCCTCCCACATGTTTGTAAGGAATAGACAACACCTATAAGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGCCCTCCCACATGTTTGTAAGGAATAGACAACACCTATAAGATA  400

seq1  CAACAACAAATCAAGGCCTTTCAAATTCCCAAGGTTAAACAGGTCTCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAAATCAAGGCCTTTCAAATTCCCAAGGTTAAACAGGTCTCACT  450

seq1  CAAAGTTATAATGGTTGGTAAGTGGTACTGCACCTCTATTGACCATTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTATAATGGTTGGTAAGTGGTACTGCACCTCTATTGACCATTTAC  500

seq1  CCAGAAGAATTCTCATACACTTCCTTTTAATGTTGGCTTATAAAACACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGAATTCTCATACACTTCCTTTTAATGTTGGCTTATAAAACACAT  550

seq1  TCAATCAAATACTTTCAGAAGTACATCTAGAGCATGTCGGCCATTTTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCAAATACTTTCAGAAGTACATCTAGAGCATGTCGGCCATTTTGAA  600

seq1  GCAATACTAAATCTGTTTTCTACTAAAACAAACAATGTCTTTTGGGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATACTAAATCTGTTTTCTACTAAAACAAACAATGTCTTTTGGGGAAA  650

seq1  AGAATCAGAAATGTCTTTCAGTATTTTTTTTTTACTCTGGTAAACATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCAGAAATGTCTTTCAGTATTTTTTTTTTACTCTGGTAAACATTTA  700

seq1  TAAGACCAGGACATGAAAATGAAAGGGATTTGTTGTTGTTGTTTTAAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACCAGGACATGAAAATGAAAGGGATTTGTTGTTGTTGTTTTAAATT  750

seq1  TCCTTAAGGGCATGTGATCCTTATTGCAATTGTACACAGAAAACTCTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAAGGGCATGTGATCCTTATTGCAATTGTACACAGAAAACTCTCAA  800

seq1  GTGACTTTAATCCTCCTTATTGGTGGTGCAGTTCATCGCAATACAAAAAA  850
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTGACTTTAATCCTCC-TATTGGTGGTGCAGTTCATCGCAATACAAAAAA  849

seq1  GGGCTGCTACAATCTACCTGCTATTTACATGGCCCCAAACAAATAG-AAA  899
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGGCTGCTACAATCTACCTGCTATTTACATGGCCCCAAACAAATAGAAAA  899

seq1  AACAACAAGGAGACATCACCTAAGTGTA-GACTGAGCAGTTCTAGTGTG-  947
      |||||||||||||||||||||||||||| |||||||||||||||||||| 
seq2  AACAACAAGGAGACATCACCTAAGTGTAGGACTGAGCAGTTCTAGTGTGT  949

seq1  TTTTTTCTCAAATCCCTAAACTCCAAATTTCAATTCAGGG-TTCATTTGT  996
      ||||||||| |||||||||||  | ||||||||||||||| |||||||||
seq2  TTTTTTCTC-AATCCCTAAACCTCCAATTTCAATTCAGGGTTTCATTTGT  998

seq1  CAGGGAAAAAGGGACTCCTCTGGTGGCCCCACTGGAATTAGAATTCATTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAAAAAGGGACTCCTCTGGTGGCCCCACTGGAATTAGAATTCATTC  1048

seq1  CTCAGATCTGG-TTAACAAATGCTGCTTTCTCTAGGTGGGAAGCAAATT-  1094
      ||||||||||| ||||||||||||||||||||||||||| |  |||||| 
seq2  CTCAGATCTGGTTTAACAAATGCTGCTTTCTCTAGGTGGAAGCCAAATTG  1098

seq1  GTTCAGTTTGACT--CCCAGGGCTGTGCTG-CCTGCAGAGGCTACA--GG  1139
      || ||||||||||  || ||| |||||||| | |||||| ||||||  ||
seq2  GTCCAGTTTGACTTCCCAAGGCCTGTGCTGACTTGCAGA-GCTACAAGGG  1147

seq1  T--CCTCATCACTCT-GAGTG  1157
      |  |||||||||||| |||||
seq2  TTCCCTCATCACTCTGGAGTG  1168