BAC Information

Click to search

BAC

Clone NameB6Ng01-228E22
Chromosome9 (Build37)
Map Location 87,543,381 - 87,543,777
singlet/doubletsinglet
Overlap genenone
Upstream geneMod1, Prss35, Snap91, C030002E08Rik, Cyb5r4, LOC666777, LOC244958, LOC100039510, 4922501C03Rik, LOC671706
Downstream geneTbx18, LOC671731, LOC100039580, LOC384962, EG272633, Nt5e, Snx14, LOC100039601, Syncrip, 2810026P18Rik, 4930422I07Rik, EG547109
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228E22.bB6Ng01-228E22.g
ACCGA041751GA041752
length3911,194
definitionB6Ng01-228E22.b B6Ng01-228E22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tcttattagaataatgggaaaggttttatttgggggaaaaaaaacccaga
atagtgggtaacttgaatcaggatttcagctttttctgttttgggttatc
tttcttttttacaaaggaccttcataggtgcaccctcatagaggcaaagg
ggctgggggatgggatggggagttcgtggaggggaaagctggaagggaga
caacatttgaaatgtaaataaataaaataaccaatttttttctaaaaagg
gaaaaatcattttcaagataaatgtttaatgaattcgtcacctttcatcc
ttggtgatcttgggcctgtgaatcactgaactcattttgttttccccaag
ggaaggaactttggtaaccacatcaacagtggtaatgagac
gaattctcacctgcaggttataccaaatggcagagaaacacctgaaaaaa
tgttcaacatccttaatcatcagggaaatgcaaatcaaaacaaacctgag
attccacctcacaccagtcagaatggctaagatcaaaaattcaggtgaca
gcagatgctggcgtggatgtggagaaagaggaacactcctccattgttgg
tgggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcct
cagaaaattggacatagtactaccggaggatacagcaatacctctcctgg
gcatatatccagaagatgctccaactggtaagaaggacacatgctccact
atgttcatagcagccttatttataatagccagaagctggaaagaacctag
atgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaa
tggagtactactcagctattaaaaagaatgaatttatgaaattcctaggc
aaatggatggacctggagggcatcatcctgagtgaggtaacacattcaca
aagaaactcacacaatatgtactcactgataagtggatattagccccaaa
cctaggatacccaagatataagatataatttgctaaacacatgaaactca
agaagaatgaagactgaagtgtggacactatgcccctccttagatttggg
aacaaaacacccatggaaggagttacagagacaaagtttggagctgagat
gaaaggatggaccatgtagagactgccatatccagggatccaccccataa
tcagcatccaaacgctgacaccattgcatacactagcaagatttttattg
aaaggacccagatgtagctgtctcttgtgagactatgccggggcctagca
acacagaagtggatgctcacagtcagtttaatggatggatcatagggcct
cccaaatggaggagctagagaaagttagccagagctaaagggatctgcaa
ccctatataggtggacacattatggaactaccagtaccccggagctcttg
actctagctgcaatatatatccaaaggattgactagttcgcaatcactga
aagagagcccattgaacttgcaactttaattgcctagtacggtaaccatg
acaaaaaggtggaatggttggtactgatgtagtagttgtgcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_87543381_87543777
seq2: B6Ng01-228E22.b_47_443 (reverse)

seq1  GTCTCATTACCACTGTTGATGTGGTTACCAAAGTTCCTTCCCTTGGGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCATTACCACTGTTGATGTGGTTACCAAAGTTCCTTCCCTTGGGGAA  50

seq1  AACAAAATGAGTTCAGTGATTCACAGGCCCAAGATCACCAAGGATGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATGAGTTCAGTGATTCACAGGCCCAAGATCACCAAGGATGAAAG  100

seq1  GTGACGAATTCATTAAACATTTATCTTGAAAATGATTTTTCCCTTTTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACGAATTCATTAAACATTTATCTTGAAAATGATTTTTCCCTTTTTAG  150

seq1  AAAAAAATTGGTTATTTTATTTATTTACATTTCAAATGTTGTCTCCCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATTGGTTATTTTATTTATTTACATTTCAAATGTTGTCTCCCTTC  200

seq1  CAGCTTTCCCCTCCACGAACTCCCCATCCCATCCCCCAGCCCCTTTGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTCCCCTCCACGAACTCCCCATCCCATCCCCCAGCCCCTTTGCCT  250

seq1  CTATGAGGGTGCACCTATGAAGGTCCTTTGTAAAAAAGAAAGATAACCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGGGTGCACCTATGAAGGTCCTTTGTAAAAAAGAAAGATAACCCA  300

seq1  AAACAGAAAAAGCTGAAATCCTGATTCAAGTTACCCACTATTCTGGGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAAAAAGCTGAAATCCTGATTCAAGTTACCCACTATTCTGGGTTT  350

seq1  TTTTTCCCCCAAATAAAACCTTTCCCATTATTCTAATAAGAGAATTC  397
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCCCCAAATAAAACCTTTCCCATTATTCTAATAAGAGAATTC  397