BAC Information

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BAC

Clone NameB6Ng01-232E03
Chromosome9 (Build37)
Map Location 56,337,067 - 56,337,120
singlet/doubletsinglet
Overlap geneHmg20a
Upstream geneEtfa, LOC546133, Isl2, Zfp291, LOC664980, 4930563M21Rik, LOC664995, LOC665005, Rcn2, Pstpip1, Tspan3, C230081A13Rik, LOC100039535
Downstream geneLOC100039549, LOC640537, Lingo1, Odf3l1, Cspg4, Sh3px3, Imp3, Snupn, Ptpn9, 2700012I20Rik, Sin3a, Man2c1, Neil1, Commd4, 1700041C23Rik, Trcg1, 1700017B05Rik, EG330948, Ppcdc, Scamp5, D9Wsu149, LOC620603
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232E03.bB6Ng01-232E03.g
ACCGA044641GA044642
length3131,203
definitionB6Ng01-232E03.b B6Ng01-232E03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctattccgttgtttgacctgcctgtcactgtaccagtaccatgca
gcttttatcactatttctatgcattacagtttgaggtctgggatgctgat
tccctcagaagtttttttcttgttaagaatacttttcgctgtcctggggt
ttttgttttccagatgaatttgagaattactcttcccttctttctttttg
tttttctttttcttcccttccctttcctttcctttcccttcccttccctt
cccttcccttcccttcccttcccttccctttcctttccctttcctttctt
ttcttttcttttt
gaattctcacctgaggaataccgaatggcagagaagaacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagattaaaaattcaggtgataac
agatgctggcgaggatgtggagaaagaggagcactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctta
gaaaattggacaaagtcctactggaggatccagcaattcctcttctgggc
atatatccagaagctgtcccaaccagtaagaaggacacatgcttcactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaaatgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgactccatcgcatacactagcaagattttatcgaaa
gaactcagatgtagctgtctcttgtgagactatgctggggcctaataaac
acagaagtggatgctcacagtcagctaatggatgtatcacagggtccccc
aatagaggagctagagaaagtacccaaggagcttaaagggacctgcaacc
ctatagatggaacaacattatgaaactacccagtaccccagagctcttga
cttctagctgcatatgtatcagaagatgctagtcagcatcactgtaaaga
gaggccaattgaacgccaacctttatatgcctagttacagccatgccagg
caaaaagtggcaattgctgcacgggaatcgtcgttgtcagtcatacgtcg
ata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_56337067_56337120
seq2: B6Ng01-232E03.b_308_359 (reverse)

seq1  AAAAAGAAAAGAAAAGAAAGGGAAGGGAAGGGAGAAAGGAAAGGAAAGGA  50
      ||||||||||||||||||||| ||||||| |  |||||| |||| |||| 
seq2  AAAAAGAAAAGAAAAGAAAGGAAAGGGAAAG--GAAAGGGAAGGGAAGGG  48

seq1  AAGG  54
      ||||
seq2  AAGG  52