BAC Information

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BAC

Clone NameB6Ng01-241A19
Chromosome9 (Build37)
Map Location 22,926,586 - 22,927,642
singlet/doubletsinglet
Overlap genenone
Upstream geneAcp5, Pigyl, LOC100034724, 9530015I07Rik, 1810064F22Rik, Zfp809, BC050092, Zfp810, LOC100041826, EG625603, Anln, 9530077C05Rik, rp9, LOC100041870, Bbs9, LOC100040805
Downstream geneBmper, LOC100040866, LOC100040878, LOC100040893, Npsr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241A19.bB6Ng01-241A19.g
ACCGA051063GA051064
length1,1651,132
definitionB6Ng01-241A19.b B6Ng01-241A19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccaccat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggtatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatacccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctaatgcatggatcacagggctccca
atggagagctagagaagtacccaagagctaaagggatctgcaccctatag
tgatcaacattatgactaccagtaccccggagcttcttgacttctagctg
catatgtatcaaggatggcctagtcgcatcactgggaaagagagcccatt
ggacaccaactttatatggccgaaaggacgccagcaaatgggagtggcag
ttagtagattgtgtg
gaattctctgccccaaagaggccatcgtaatcattccctctccacagaag
ctcaggagacatcatgaaagggatgttccagaacgattgtgtccagagga
tggagaggagagctgtgaaattctgtcctttggacatgtctagtccactc
acaaactcacaggagctgtgcttatctgttcaagtcatgcaaaagatcaa
gccagccaaaattccagcagagatgagaaaggagctgatgggctcccacc
cttaactgagaagtgactggcttagttgacagttactaaagggggaaaaa
ttattcttatttgaaggccttaaacaacacctattaccattgctaggctt
gtttatttttaggacagtgtgggtactggcaggttgtccacgcaccagtg
gatagccccacgcccatgcacatatgggtaacattaaagagaccttgtga
gctataaacaaagaaaacagagaaggacatgaagttagaaggcagattct
tgaggggaagcctgtaagcagttgggagataagggaagtagatattacta
tatttcactgtatggaattctcaaagaaaaataaacaagcctagcagtgg
taataggtgtcattatatacccattagcagagtggaagtcagagcaaatg
attgcgtaaatgcttgggaggatgctcgggaggactcgaatcagcaggac
tctcactgtgatgggaaagcaaaatggtccagatgctttggaaaacagct
tggtagttacttatataacgaacacatttttttaaccatagtactccacc
aatgatgctccatgataaccacataaaggggttgaaaattgaactgtgtg
agtgttctgggacacgactgtaacctcaatcctgggagttacaaagttgg
gaggatagctgaatagtgattcagagaccttgtctcaaaaataaagtgag
caaaaaaataaataaagaaacataaagacattggatatgggtttgtgttc
acagaaaatgcatgtactgtcaaaaacagtttactcatatgccagaaccc
tgagcagccacaatgttctttcgtagattgaacagatccacaggtctgtg
atcatctaggtccaggcattatttaagctcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_22926586_22927642
seq2: B6Ng01-241A19.g_151_1196

seq1  TTGTGTCCAGAGGATGGAGAGGAGAGCTGTGAAATTCTGTCCTTTGGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCCAGAGGATGGAGAGGAGAGCTGTGAAATTCTGTCCTTTGGACA  50

seq1  TGTCTAGTCCACTCACAAACTCACAGGAGCTGTGCTTATCTGTTCAAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAGTCCACTCACAAACTCACAGGAGCTGTGCTTATCTGTTCAAGTC  100

seq1  ATGCAAAAGATCAAGCCAGCCAAAATTCCAGCAGAGATGAGAAAGGAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAAAGATCAAGCCAGCCAAAATTCCAGCAGAGATGAGAAAGGAGCT  150

seq1  GATGGGCTCCCACCCTTAACTGAGAAGTGACTGGCTTAGTTGACAGTTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGCTCCCACCCTTAACTGAGAAGTGACTGGCTTAGTTGACAGTTAC  200

seq1  TAAAGGGGGAAAAATTATTCTTATTTGAAGGCCTTAAACAACACCTATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGGGGAAAAATTATTCTTATTTGAAGGCCTTAAACAACACCTATTA  250

seq1  CCATTGCTAGGCTTGTTTATTTTTAGGACAGTGTGGGTACTGGCAGGTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCTAGGCTTGTTTATTTTTAGGACAGTGTGGGTACTGGCAGGTTG  300

seq1  TCCACGCACCAGTGGATAGCCCCACGCCCATGCACATATGGGTAACATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACGCACCAGTGGATAGCCCCACGCCCATGCACATATGGGTAACATTA  350

seq1  AAGAGACCTTGTGAGCTATAAACAAAGAAAACAGAGAAGGACATGAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACCTTGTGAGCTATAAACAAAGAAAACAGAGAAGGACATGAAGTT  400

seq1  AGAAGGCAGATTCTTGAGGGGAAGCCTGTAAGCAGTTGGGAGATAAGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCAGATTCTTGAGGGGAAGCCTGTAAGCAGTTGGGAGATAAGGGA  450

seq1  AGTAGATATTACTATATTTCACTGTATGGAATTCTCAAAGAAAAATAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATATTACTATATTTCACTGTATGGAATTCTCAAAGAAAAATAAAC  500

seq1  AAGCCTAGCAGTGGTAATAGGTGTCATTATATACCCATTAGCAGAGTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTAGCAGTGGTAATAGGTGTCATTATATACCCATTAGCAGAGTGGA  550

seq1  AGTCAGAGCAAATGATTGCGTAAATGCTTGGGAGGATGCTCGGGAGGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGAGCAAATGATTGCGTAAATGCTTGGGAGGATGCTCGGGAGGACT  600

seq1  CGAATCAGCAGGACTCTCACTGTGATGGGAAAGCAAAATGGTCCAGATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATCAGCAGGACTCTCACTGTGATGGGAAAGCAAAATGGTCCAGATGC  650

seq1  TTTGGAAAACAGCTTGGTAGTTACTTATATAACGAACACATTTTTTTAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAAACAGCTTGGTAGTTACTTATATAACGAACACATTTTTTTAAC  700

seq1  CATAGTACTCCACCAATGATGCTCCATGATAACCACATAAAGGGGTTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTACTCCACCAATGATGCTCCATGATAACCACATAAAGGGGTTGAA  750

seq1  AATTGAACTGTGTGAGTGTTCTGGGACACGACTGTAACCTCAATCCTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAACTGTGTGAGTGTTCTGGGACACGACTGTAACCTCAATCCTGGG  800

seq1  AGTTACAAAGTTGGGAGGATAGCTGAATAGTGATTCAGAGACCTTGTCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACAAAGTTGGGAGGATAGCTGAATAGTGATTCAGAGACCTTGTCTC  850

seq1  AAAAATAAAGTGAGCAAAAAAAATAAATAAAGAAAACAATAAAGAACATT  900
      ||||||||||||||| |||||||||||||||||||   |||||| |||||
seq2  AAAAATAAAGTGAGC-AAAAAAATAAATAAAGAAA--CATAAAG-ACATT  896

seq1  GGATATGGGTTTGTGTTCACAGAAAATTGCATGTACTTGTCAAAAACAGT  950
      |||||||||||||||||||||||||| ||||||||| |||||||||||| 
seq2  GGATATGGGTTTGTGTTCACAGAAAA-TGCATGTAC-TGTCAAAAACAG-  943

seq1  TTTACTCATAATTGCCAGAACCTGGAAGCAGCCACAATGTTCTTTCGGTA  1000
      ||||||||||  ||||||||||  | |||||||||||||||||||| |||
seq2  TTTACTCATA--TGCCAGAACCCTG-AGCAGCCACAATGTTCTTTC-GTA  989

seq1  GA-TGAACAGATTCACA-GTCTGTGATACATCTA-GTCAAGGGCATATTA  1047
      || ||||||||| |||| ||||||||| |||||| ||| |||    ||||
seq2  GATTGAACAGATCCACAGGTCTGTGAT-CATCTAGGTCCAGG---CATTA  1035

seq1  TTT-AGCTCTA  1057
      ||| |||||||
seq2  TTTAAGCTCTA  1046