BAC Information

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BAC

Clone NameB6Ng01-244I05
Chromosome9 (Build37)
Map Location 109,471,374 - 109,472,490
singlet/doubletsinglet
Overlap genenone
Upstream geneDalrd3, Wdr6, 4933406E20Rik, Arih2, ENSMUSG00000074075, Slc25a20, Prkar2a, Ihpk2, Nckipsd, Celsr3, Slc26a6, LOC100038959, Tmem89, Uqcrc1, Col7a1, Pfkfb4, Scotin, Trex1, 6620401K05Rik, Ccdc72, Ccdc51, EG665413, Plxnb1, E330009P21Rik, Fbxw13, Fbxw12, Fbxw14, LOC668758, EG382156, Fbxw16, Fbxw19, LOC635668, Fbxw15
Downstream geneEG382106, E330001B16Rik, C85627, EG382109, 1700124P09Rik, Spink8, 3000002C10Rik, Nme6, Camp, Cdc25a, LOC100043782, Mtap4, LOC100049540, Dhx30, Smarcc1, Rn4.5s-ps2, Cspg5, Tmem103, Scap, Ptpn23, Ngp, Klhl18, Kif9, Setd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244I05.bB6Ng01-244I05.g
ACCGA053629GA053630
length1,2081,104
definitionB6Ng01-244I05.b B6Ng01-244I05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgaacatctatgctccaaatgcaagggcatccacattcattaga
gaaactttattaaagctcaaaacacacattgcaccacacccaataatagt
gagagtcttcaacatcccagtctcatctatggacagatcctggaaacaga
aactaaacagggacacagtgaaactaacagacgttatgaaccaaatggat
ttaacagatatcaacagaacattttatcctaaaacaaaagatataccttc
ttctcagcacctcatggtacctaccttctacaaaattgactgtatagttg
gtcacaaaacaggcctcaacagatacaaaaatattgaaataatcccatgc
atcttatcatatcaccatggactaaggctgatcttcaataacaaataata
gaaagcccacatacacatggaagctgaacaacactctactcaatgataac
ttggttcaaggaagaaataaagaaattaaagactttttagagttcaagga
aaatgaagctacaacatacccaaacttatgggacacaatgaaagcagtcc
taagaggaaaactcatagctctgagtgcctccaaacagaaactggagaga
gcatatacaagcagtttgacagcacacctgaaagctctagaacagaagga
agcaaatacacccaagaggagtagatggtaggaaataatcaaactcaggg
ctgaaatcagccaagtggaaataaaaagaactatataaagaatcaaccaa
accaggagctggatctttgagaaaatcacgaagataactaaacccttagc
cagactaactagtaggcacagggacaatatccaaaactacaaaatcagaa
atgaaaagggagacataacagaatctgaggaagtcaaatatatcatcaga
tcctactacaaaaggctatactcaccaaaactggaaaacctgggatgaaa
tagacaatttctagacagataccaggtaaatcaggtcagataatgatcta
aatagtgtatatctcctaaagacatggaaacagtcattaatagtctcctc
gaaccaaaaaaggccccgggaccaaagggatttaggtacaggagtcaatc
gaacgtcaaagaagaacctaagttcattcttcccttcaaaactatcccaa
aatagaaaccgaagataactctctaccagttcatccattgaagcgcacac
aattaacg
gaattccaggccagtctagggtaaagaatgagaatttgtttccaaaaaag
agtaaaagagtcatgctgattgtattcatgatgattatagtactaactag
taatcagaatgtattttcattcttaaattaccttcacatgtgtatctaca
ggtagggcttatgtcctggatccttagtaactgtgatactttgtactgta
aaacaataacccaaggaacccagcagtacgatagagtacactcagacata
caccatggacatatgcacgtatacatacttagacatacacacatacaaaa
tggttatataagacacagtttaaactatgctctctactgattcagattga
gaataattttgaggactgcagatcccactactggatttgttactacaaaa
ttggatgttagaacatgaagcaactgcaaccagcaaaaccaaagcagcct
gcagaggggactcaggccacagtacaggccctgagaggagccagagacct
tgctgtgcttcactttctcagttttcacctttctttctttctttcttcct
tccttccttccttccttcctttctttctttctttcttccttccttccttc
cttccttccttcctttctttctttctttctttctctttcttcttttcttt
ccttttttatttctttccttctttttattttttctcttctttatttgatt
ttgagacaggttctcactctcttcccctgactgaccagcctggatcttga
tatatagtccaggcctcaaaccaagatatatgtctgcctctgcctcccaa
gtgaatgggatgaaagatgtgtgccacaatgcctggctttgacctttctg
tttgctgagccagaggatggccctggcattgctacctagacacctaaaca
atggatatttcatttcatggtgttattgacctgtccagcagtccagttat
tcaaagggtctcgaggggacctcctcctagaacccaatggggggtaagag
agggatgagggccttgtgcgaataacacacgaaccttttctggatgcatc
aaagcccaatgtattgagaacggccagctaatgcacaagcaaagggaagt
caga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_109471374_109472490
seq2: B6Ng01-244I05.g_65_1168

seq1  GAATTCCAGGCCAGTCTAGGGTAAAGAATGAGAATTTGTTTCCAAAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCCAGTCTAGGGTAAAGAATGAGAATTTGTTTCCAAAAAAG  50

seq1  AGTAAAAGAGTCATGCTGATTGTATTCATGATGATTATAGTACTAACTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAAGAGTCATGCTGATTGTATTCATGATGATTATAGTACTAACTAG  100

seq1  TAATCAGAATGTATTTTCATTCTTAAATTACCTTCACATGTGTATCTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAGAATGTATTTTCATTCTTAAATTACCTTCACATGTGTATCTACA  150

seq1  GGTAGGGCTTATGTCCTGGATCCTTAGTAACTGTGATACTTTGTACTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGGCTTATGTCCTGGATCCTTAGTAACTGTGATACTTTGTACTGTA  200

seq1  AAACAATAACCCAAGGAACCCAGCAGTACGATAGAGTACACTCAGACATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATAACCCAAGGAACCCAGCAGTACGATAGAGTACACTCAGACATA  250

seq1  CACCATGGACATATGCACGTATACATACTTAGACATACACACATACAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATGGACATATGCACGTATACATACTTAGACATACACACATACAAAA  300

seq1  TGGTTATATAAGACACAGTTTAAACTATGCTCTCTACTGATTCAGATTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTATATAAGACACAGTTTAAACTATGCTCTCTACTGATTCAGATTGA  350

seq1  GAATAATTTTGAGGACTGCAGATCCCACTACTGGATTTGTTACTACAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAATTTTGAGGACTGCAGATCCCACTACTGGATTTGTTACTACAAAA  400

seq1  TTGGATGTTAGAACATGAAGCAACTGCAACCAGCAAAACCAAAGCAGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGTTAGAACATGAAGCAACTGCAACCAGCAAAACCAAAGCAGCCT  450

seq1  GCAGAGGGGACTCAGGCCACAGTACAGGCCCTGAGAGGAGCCAGAGACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGGGACTCAGGCCACAGTACAGGCCCTGAGAGGAGCCAGAGACCT  500

seq1  TGCTGTGCTTCACTTTCTCAGTTTTCACCTTTCTTTCTTTCTTTCTTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGCTTCACTTTCTCAGTTTTCACCTTTCTTTCTTTCTTTCTTCCT  550

seq1  TCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTC  600

seq1  CTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTCTTTCTTCTTTTCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTCTTTCTTCTTTTCTTT  650

seq1  CCTTTTTTATTTCTTTCCTTCTTTTTATTTTTTCTCTTCTTTATTTGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTTATTTCTTTCCTTCTTTTTATTTTTTCTCTTCTTTATTTGATT  700

seq1  TTGAGACAGGTTCTCACTCTCTTCCCCTGACTGACCAGCCTGGATCTTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACAGGTTCTCACTCTCTTCCCCTGACTGACCAGCCTGGATCTTGA  750

seq1  TATATAGTCCAGGCCTCAAACCAAGATATATGTCTGCCTCTGCCTCCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGTCCAGGCCTCAAACCAAGATATATGTCTGCCTCTGCCTCCCAA  800

seq1  GTGAATGGGATGAAAGATGTGTGCCACAATGCCTGGCTTTGACCTTTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGGGATGAAAGATGTGTGCCACAATGCCTGGCTTTGACCTTTCTG  850

seq1  TTTGCTGAGCCAGAGGATGGCCCTGGCATTGCTACCCTAGACACCTAAAC  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTGCTGAGCCAGAGGATGGCCCTGGCATTGCTA-CCTAGACACCTAAAC  899

seq1  AATGGATATTTCATTTCATGGTG-TATTGACCTGTCCAGCAGGTCCAGTT  949
      ||||||||||||||||||||||| ||||||||||||||||| ||||||||
seq2  AATGGATATTTCATTTCATGGTGTTATTGACCTGTCCAGCA-GTCCAGTT  948

seq1  ATTC-AAGGGTCTCGAGGGGACCTCCTCCTAAGAACCAAATGGGGGGT-A  997
      |||| ||||||||||||||||||||||||| |||||| |||||||||| |
seq2  ATTCAAAGGGTCTCGAGGGGACCTCCTCCT-AGAACCCAATGGGGGGTAA  997

seq1  GAGAGGGATGAGGGCCTTGTGCGAATAACAACACGGAAACCTTTCTGGAA  1047
      ||||||||||||||||||||||||||||| |||| ||| | ||||||| |
seq2  GAGAGGGATGAGGGCCTTGTGCGAATAAC-ACAC-GAACCTTTTCTGG-A  1044

seq1  TGCATCAAAGCCCCAAATGTATTGAGAAAGGCCCAAGGCTTAAATGCACA  1097
      |||||||||||||  ||||||||||||| ||||    |||  ||||||||
seq2  TGCATCAAAGCCC--AATGTATTGAGAACGGCC---AGCT--AATGCACA  1087

seq1  AGCAAAAGGGGAAGTACAGA  1117
      ||||||  ||||||| ||||
seq2  AGCAAA--GGGAAGT-CAGA  1104