BAC Information

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BAC

Clone NameB6Ng01-245J03
Chromosome9 (Build37)
Map Location 113,542,369 - 113,543,201
singlet/doubletsinglet
Overlap genenone
Upstream geneEG622110, LOC100039391, LOC100043801, LOC100043802, LOC636680
Downstream genePdcd6ip, Clasp2, Ubp1, Fbxl2, Susd5, EG665719, 4921528I07Rik, Bcl2a1c, 4930520O04Rik, Crtap, Glb1, Ccr4, Trim71, LOC100043808, Cnot10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245J03.bB6Ng01-245J03.g
ACCGA054419GA054420
length833977
definitionB6Ng01-245J03.b B6Ng01-245J03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacagagacccaactgcctctcaagtgctgggattaaaggtgtgt
gctccaccattcttggtgggaagaagttttgaacagaagccaggagacaa
tggtgcctcacatctattatggcggctgtcttctatgaacttgagaaaca
cttcgagctattaccttcacgagtgagtacactgaggccctgggagacag
aacacagagtcaaggcatttctgcccagaggcctgactgcacccctgtgt
gctctgccaaagccccattctttacgtgaggcagccgtcctgtttggctg
acaggaatagagaggaggcatcttggccaggtgttctgagaaagaaaact
ggagttatcgcctattcttttgatgtgttttccatcatcagtcccctcct
tggtccccagacactttgctgctcggctccaagccatggctccctgccta
gatgagttagcaaggattctgtccccaccaacatggcagtagccgatggc
actgggcgtgagcccaagttagtcaccaaagcctcagctgcatttgtgtt
ccacagaacctctgcccagagagcaacaaagcaggtctgaacgcagaagg
gaaggcaggagactgaaccctgggtacaggcagatacgggccaaaggctg
tgcctgagctggggcggctgagctggggcagctgaggaggctctggtggg
tggggctgaggagacaagagctaggcagagatgggaaagatactgcagga
gaccaggacgcctgcaaaaacaaactatgaaaagccatgaggcttatcat
ggaagagagaggaagggaaggagggagagagga
gaattctttgtttagctctgagccccatcttttaatggggttattttttt
ttctggagtctaccctcttgagttctttatatatattggatattagtccc
ctatctgatttaagataggtaaagatcctttcccgctccactatgttcat
agcagccttatttataatagctagaagctggaaagaacccagatgcccct
caacagaggaatggataaaaaaatgtggtacatttacacaatggagtact
actcagctattaaaaagaatgaatttatgaaattcctaggcaaatggttg
gacctggagggcatcatcctgagtgaggtaacacaatcacaaaagaactc
aaatgatatatactcactgataagtggatattagcccagaaacttagtat
agcgagatataaggtacaatttgcaaaacacatgaaactgaagaagaacg
aagaccaaagtgtggacacttcgctccttcttagaattggaaacaatcac
ccatggaaggagttacagagacaaagtttggagctgagacaaaaggatgg
accatctagagactgccatatccagggatccatcccataattagcctcca
aatgatgacaccattgcatacactagcaagtgtttgttgcaaggaccgtg
atataactgtctcttgtgagactatgccggggcctagcaaacacagaagt
ggatgctcacagtcaactattggatagatcacagggcccctaatggagga
gctagggaaagtatccaaggagctaaagagatctgcaaccctgtaggtgc
aacattatgaactaaccagtaccctggagctcttgactctagctgaatat
gtatcaaagatgggcctagtcggccatcactgggaaagagaggcccattg
gacaggcaaacttttatatgccccagtacaggggaatgccagggccaaaa
agttgggaatggggtgggtaaggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_113542369_113543201
seq2: B6Ng01-245J03.b_47_879 (reverse)

seq1  TCCTCTCTCCCTCCTTCCCTTCCTCTCTCTTCCATGATAAGCCTCATGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCTCCCTCCTTCCCTTCCTCTCTCTTCCATGATAAGCCTCATGGC  50

seq1  TTTTCATAGTTTGTTTTTGCAGGCGTCCTGGTCTCCTGCAGTATCTTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATAGTTTGTTTTTGCAGGCGTCCTGGTCTCCTGCAGTATCTTTCC  100

seq1  CATCTCTGCCTAGCTCTTGTCTCCTCAGCCCCACCCACCAGAGCCTCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTGCCTAGCTCTTGTCTCCTCAGCCCCACCCACCAGAGCCTCCTC  150

seq1  AGCTGCCCCAGCTCAGCCGCCCCAGCTCAGGCACAGCCTTTGGCCCGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCCCAGCTCAGCCGCCCCAGCTCAGGCACAGCCTTTGGCCCGTAT  200

seq1  CTGCCTGTACCCAGGGTTCAGTCTCCTGCCTTCCCTTCTGCGTTCAGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGTACCCAGGGTTCAGTCTCCTGCCTTCCCTTCTGCGTTCAGACC  250

seq1  TGCTTTGTTGCTCTCTGGGCAGAGGTTCTGTGGAACACAAATGCAGCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGTTGCTCTCTGGGCAGAGGTTCTGTGGAACACAAATGCAGCTGA  300

seq1  GGCTTTGGTGACTAACTTGGGCTCACGCCCAGTGCCATCGGCTACTGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTGGTGACTAACTTGGGCTCACGCCCAGTGCCATCGGCTACTGCCA  350

seq1  TGTTGGTGGGGACAGAATCCTTGCTAACTCATCTAGGCAGGGAGCCATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTGGGGACAGAATCCTTGCTAACTCATCTAGGCAGGGAGCCATGG  400

seq1  CTTGGAGCCGAGCAGCAAAGTGTCTGGGGACCAAGGAGGGGACTGATGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGCCGAGCAGCAAAGTGTCTGGGGACCAAGGAGGGGACTGATGAT  450

seq1  GGAAAACACATCAAAAGAATAGGCGATAACTCCAGTTTTCTTTCTCAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACACATCAAAAGAATAGGCGATAACTCCAGTTTTCTTTCTCAGAA  500

seq1  CACCTGGCCAAGATGCCTCCTCTCTATTCCTGTCAGCCAAACAGGACGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGCCAAGATGCCTCCTCTCTATTCCTGTCAGCCAAACAGGACGGC  550

seq1  TGCCTCACGTAAAGAATGGGGCTTTGGCAGAGCACACAGGGGTGCAGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCACGTAAAGAATGGGGCTTTGGCAGAGCACACAGGGGTGCAGTCA  600

seq1  GGCCTCTGGGCAGAAATGCCTTGACTCTGTGTTCTGTCTCCCAGGGCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTGGGCAGAAATGCCTTGACTCTGTGTTCTGTCTCCCAGGGCCTC  650

seq1  AGTGTACTCACTCGTGAAGGTAATAGCTCGAAGTGTTTCTCAAGTTCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTACTCACTCGTGAAGGTAATAGCTCGAAGTGTTTCTCAAGTTCATA  700

seq1  GAAGACAGCCGCCATAATAGATGTGAGGCACCATTGTCTCCTGGCTTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAGCCGCCATAATAGATGTGAGGCACCATTGTCTCCTGGCTTCTG  750

seq1  TTCAAAACTTCTTCCCACCAAGAATGGTGGAGCACACACCTTTAATCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAACTTCTTCCCACCAAGAATGGTGGAGCACACACCTTTAATCCCA  800

seq1  GCACTTGAGAGGCAGTTGGGTCTCTGTGAATTC  833
      |||||||||||||||||||||||||||||||||
seq2  GCACTTGAGAGGCAGTTGGGTCTCTGTGAATTC  833