BAC Information

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BAC

Clone NameB6Ng01-247O15
Chromosome9 (Build37)
Map Location 19,171,397 - 19,172,475
singlet/doubletsinglet
Overlap genenone
Upstream geneNaalad2, B020006M18Rik, Map1lc3-ps, Mbd3l2, Zfp558, Mbd3l1, Muc16, Olfr24, Olfr828, Olfr829, Olfr830, Olfr831-ps1, Olfr832, GA_x5J8B7W6RL5-13870817-13871726, Olfr834, Olfr835, Olfr836, Olfr837, GA_x5J8B7W6RL5-13695863-13696754, Olfr839-ps1, GA_x5J8B7W6RL5-13645512-13646298, Olfr841-ps1, Olfr842-ps1, Olfr843, Olfr845, Olfr1522-ps1, Olfr846, LOC665697
Downstream geneOlfr847, GA_x5J8B7W6RL5-13451244-13452122, Olfr849, Olfr850, Olfr851, Olfr852-ps1, Olfr853, Olfr854, Olfr855, Zfp75, EG624341, LOC665751, Olfr857, Olfr858-ps1, Olfr58, Olfr859, Olfr860, GA_x5J8B7W6RL5-13004417-13003354, Olfr862, Olfr77, EG665823, Olfr863-ps1, Olfr864-ps1, Olfr865-ps1, Olfr866, Olfr867, Olfr868, Olfr869, Olfr870, Olfr871, Olfr872, Olfr39, Olfr873, Olfr18, Zfp560
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247O15.bB6Ng01-247O15.g
ACCGA056128GA056129
length1,1851,088
definitionB6Ng01-247O15.b B6Ng01-247O15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataactcacttaaagaaatacaggagaacgctgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaacaggaaaacacaaccaaacaggtagaagtccttatagaa
aaacaggaaaacacatccaaacaggtgatggaaatgaacaaaaccatact
agacctaaaaagggaagtagacacaataaagaaaacccaaagtgaggcga
cgctggagatagaaaccctaggaaagaaatctggaaccatagatgccagt
atcagcaacagaatacaagagatggaagagagaatctcaggtgcagaaga
ctccatagagaacatcggcacaacaatcaaagaaaatggaaaatgcaaaa
agatcctaactcaaaacatccaggaaatccaggacacaatgagaagacca
aacctacggataataggagtggatgagaatgaagattttcaactcaaagg
accagcaaacatcttcaacaaaattattgaagaaaacttcccaaatctaa
agaaagagatgcccatgaacatacaagaagcctacagaactccaaataga
ctggaccagaaaagaaattcctcccgacacataataatcagaacaccaaa
tgcactaaataaagatagaatactaaaagcagtaagggaaaaaggtcaag
taacatataaaggcaagcctatcagaattacaccagatttttcaccagag
actatgaaagccagaagagcctggacagatgttatacagacactaagaga
acacaaatgccagcccaggctactatacccagccaaactctcaattacca
tagatggagaaaccaaagtattcccacgacaaactaaattcacccattat
ctctccacgaatccagcccttcaaaggatataacagaaaaaaaacaatac
aagggacgggaaccacgccctagaaaaaaacaagaagataatccctcaca
acctaaagaagacagccacagaacagaatgccaacttacaccaaaaataa
cagagcacattaccttccttatatcttcttatatcaatggacctcattcc
ccaataaagacttagacctacagaactggctaccgaatggatccacattc
tgcctgccttacagaaacccatctctctaggtata
ttggacagctcagagaagatcttggtttggttttcagcactcagatggtc
tctgggtcatataacatggaaagatgtatcaatcctaagtagtaaaaaca
agagaaaaagaaacaaatatcaattgaaaatgaataaagaaaacctcaga
aagcgtacaaggaaatattctaaagtgcattctggagacccatctgtaat
tagggctaccattcctctctgttggcataaaactaaatatgaaaaataca
tacagtgaatggatactggcattttaacatctcagagacttaagaagctg
ttctgcatggaagagttttctgtcatgacagttgtcctttgtgtgtttct
tttctagcattggtataaaatgagagagagagagagagagagagagagag
agagagagagagagagagagagagagagagagagcagttcttttactcac
ctttgttgtgataggctgtactgtcccaaaactacttaagaggaaacagg
gttgaattggcttataattacaggttataatacatatttaaaataaataa
ctaaagaagctagtcaaaccaaatccacagacaagaacagagtaaaatgg
atgcttttgtcatgcctgatgccaagctgcctatatttagcttgctttgt
ttacacagagcacaaaaaacttcttttaggggaatattgccactcacaat
gtgttgggattttacacatccatcagcaaatcaaagatgatgcttcatag
acatgtccataaggaaacgtgtttctaggcaattattaaacagagtgtct
cttacattcttctcccaatgatctagtttgtgattagttgaaatttcaaa
attaactagtacacaatttttaaaagcattattgcttaacataaaaagca
ctgaattttaatgttcctgtattccatgtgctaatgctgattctgtaaga
ggaatcattttatatccatgaatttcagttattttacttatcatagacaa
ttcttcaaaacaaattaatcatagtatatattagggtaaatgagtcagta
aaatccattagaaaatctctaaaaattgaaattatctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_19171397_19172475
seq2: B6Ng01-247O15.g_77_1164 (reverse)

seq1  GAGATAAATTTTAATTTTTTAAGA-TTTCTAAT-GATTTTACTAACTCAT  48
      ||||| ||||| |||||||  ||| |||||||| ||||||||| ||||||
seq2  GAGAT-AATTTCAATTTTTAGAGATTTTCTAATGGATTTTACTGACTCAT  49

seq1  TTA-CCTAATATATATTATGATTTAATTTGTTTTG-AGATTTGTCTATGA  96
      ||| ||||||||||| ||||| ||||||||||||| ||| ||||||||||
seq2  TTACCCTAATATATACTATGA-TTAATTTGTTTTGAAGAATTGTCTATGA  98

seq1  TAAGTAAA--TACTGAAA-TCATGGATATTAAAATGATTCCTCTTACAGA  143
      ||||||||   ||||||| ||||||||| |||||||||||||||||||||
seq2  TAAGTAAAATAACTGAAATTCATGGATA-TAAAATGATTCCTCTTACAGA  147

seq1  ATCAGCATTAGCACATGGAATACA-GAACATTTAAAATTCAGTGCTTTTT  192
      |||||||||||||||||||||||| ||||| |||||||||||||||||||
seq2  ATCAGCATTAGCACATGGAATACAGGAACA-TTAAAATTCAGTGCTTTTT  196

seq1  ATGTTTAGC-ATAATGCTTTT-AAAATTGTGTACTAGTTAATTTTG-AAT  239
      ||||| ||| ||||||||||| |||||||||||||||||||||||| |||
seq2  ATGTTAAGCAATAATGCTTTTAAAAATTGTGTACTAGTTAATTTTGAAAT  246

seq1  TTCAACTAATCACAAACTAGATCATTGGGAGAAGAATGTAAGAGACACTC  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTAATCACAAACTAGATCATTGGGAGAAGAATGTAAGAGACACTC  296

seq1  TGTTTAATAATTGCCTAG-AACACGTTTCCTTATGGACATGTCTATGAAG  338
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGTTTAATAATTGCCTAGAAACACGTTTCCTTATGGACATGTCTATGAAG  346

seq1  CATCATC-TTGATTTGCTGATGGATGTGTAAAATCCCAACACATTGTGAG  387
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCTTTGATTTGCTGATGGATGTGTAAAATCCCAACACATTGTGAG  396

seq1  TGGCAATATTCCCCTAAAAGAAGTTTTTTGTGCTCTGTGTAAACAAAGCA  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAATATTCCCCTAAAAGAAGTTTTTTGTGCTCTGTGTAAACAAAGCA  446

seq1  AGCTAAATATAGGCAGCTTGGCATCAGGCATGACAAAAGCATCCATTTTA  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAATATAGGCAGCTTGGCATCAGGCATGACAAAAGCATCCATTTTA  496

seq1  CTCTGTTCTTGTCTGTGGATTTGGTTTGACTAGCTTCTTTAGTTATTTAT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTCTTGTCTGTGGATTTGGTTTGACTAGCTTCTTTAGTTATTTAT  546

seq1  TTTAAATATGTATTATAACCTGTAATTATAAGCCAATTCAACCCTGTTTC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATATGTATTATAACCTGTAATTATAAGCCAATTCAACCCTGTTTC  596

seq1  CTCTTAAGTAGTTTTGGGACAGTACAGCCTATCACAACAAAGGTGAGTAA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAGTAGTTTTGGGACAGTACAGCCTATCACAACAAAGGTGAGTAA  646

seq1  AAGAACTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  696

seq1  CTCTCTCTCTCTCTCTCTCTCATTTTATACCAATGCTAGAAAAGAAACAC  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCATTTTATACCAATGCTAGAAAAGAAACAC  746

seq1  ACAAAGGACAACTGTCATGACAGAAAACTCTTCCATGCAGAACAGCTTCT  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGACAACTGTCATGACAGAAAACTCTTCCATGCAGAACAGCTTCT  796

seq1  TAAGTCTCTGAGATGTTAAAATGCCAGTATCCATTCACTGTATGTATTTT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTCTGAGATGTTAAAATGCCAGTATCCATTCACTGTATGTATTTT  846

seq1  TCATATTTAGTTTTATGCCAACAGAGAGGAATGGTAGCCCTAATTACAGA  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTTAGTTTTATGCCAACAGAGAGGAATGGTAGCCCTAATTACAGA  896

seq1  TGGGTCTCCAGAATGCACTTTAGAATATTTCCTTGTACGCTTTCTGAGGT  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTCCAGAATGCACTTTAGAATATTTCCTTGTACGCTTTCTGAGGT  946

seq1  TTTCTTTATTCATTTTCAATTGATATTTGTTTCTTTTTCTCTTGTTTTTA  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTATTCATTTTCAATTGATATTTGTTTCTTTTTCTCTTGTTTTTA  996

seq1  CTACTTAGGATTGATACATCTTTCCATGTTATATGACCCAGAGACCATCT  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTAGGATTGATACATCTTTCCATGTTATATGACCCAGAGACCATCT  1046

seq1  GAGTGCTGAAAACCAAACCAAGATCTTCTCTGAGCTGTCCAA  1079
      ||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTGAAAACCAAACCAAGATCTTCTCTGAGCTGTCCAA  1088