MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-250C03
Chromosome	9 (Build37)
Map Location	61,581,577 - 61,713,986
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Larp6, LOC100040447, Uaca, ENSMUSG00000052143, A430102L10, LOC100040481, Tle3, LOC100039851
Downstream gene	Rplp1, Kif23, Paqr5, Glce, Spesp1, LOC100039897, Anp32a, Coro2b, Itga11, EG665478, Fem1b, Cln6, Calml4
Link	Open Mouse BAC browser

Click to get alignment info.

name	Larp6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67557 MGI:1914807
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040447 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040447
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Uaca (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72565 MGI:1919815
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	ENSMUSG00000052143 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:791387 MGI:3642719
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	A430102L10 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:330956
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100040481 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040481
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Tle3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21887 MGI:104634
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039851 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039851
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 15 Proteins

name	Rplp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56040 MGI:1927099
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kif23 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71819 MGI:1919069
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Paqr5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74090 MGI:1921340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Glce (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93683 MGI:2136405
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spesp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66712 MGI:1913962
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039897 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039897
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Anp32a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11737 MGI:108447
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Coro2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235431 MGI:2444283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itga11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319480 MGI:2442114
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665478 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665478 MGI:3643729
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Fem1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14155 MGI:1335087
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cln6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76524 MGI:2159324
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Calml4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75600 MGI:1922850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Larp6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372822 GeneID:67557 MGI:1914807
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : La ribonucleoprotein domain family, member 6 transcript_id : NM_026235.3

name	LOC100040447 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260010 GeneID:100040447
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC100040447 transcript_id : XM_001475271.1

name	Uaca (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130474 GeneID:72565 MGI:1919815
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : uveal autoantigen with coiled-coil domains and ankyrin repeats transcript_id : NM_028283.2

name	ENSMUSG00000052143 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260012 GeneID:791387 MGI:3642719
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : predicted gene, ENSMUSG00000052143 transcript_id : XM_001475287.1

name	A430102L10 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259996 GeneID:330956
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein A430102L10 transcript_id : XM_001473612.1

name	LOC100040481 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260014 GeneID:100040481
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100040481 transcript_id : XM_001475306.1

name	Tle3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678360 GeneID:21887 MGI:104634
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transducin-like enhancer of split 3, homolog of Drosophila E(spl) transcript_id : NM_009389.1

name	LOC100039851 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259998 GeneID:100039851
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 ESTs, 15 Proteins product : similar to Hmgb1 protein transcript_id : XM_001473665.1

name	Rplp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130696 GeneID:56040 MGI:1927099
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein, large, P1 transcript_id : NM_018853.3

name	Kif23 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:29568093 GeneID:71819 MGI:1919069
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kinesin family member 23 transcript_id : NM_024245.3

name	Paqr5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142383667 GeneID:74090 MGI:1921340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : progestin and adipoQ receptor family member V transcript_id : NM_028748.2

name	Glce (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892759 GeneID:93683 MGI:2136405
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glucuronyl C5-epimerase transcript_id : NM_033320.4

name	Spesp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802273 GeneID:66712 MGI:1913962
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sperm equatorial segment protein 1 transcript_id : NM_025721.2

name	Anp32a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254599 GeneID:11737 MGI:108447
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acidic (leucine-rich) nuclear phosphoprotein 32 family, member A transcript_id : NM_009672.2

name	Coro2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803424 GeneID:235431 MGI:2444283
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coronin, actin binding protein, 2B transcript_id : NM_175484.2

name	Itga11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254394 GeneID:319480 MGI:2442114
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integrin, alpha 11 transcript_id : NM_176922.4

name	Fem1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46402518 GeneID:14155 MGI:1335087
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : feminization 1 homolog b (C. elegans) transcript_id : NM_010193.3

name	Cln6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372439 GeneID:76524 MGI:2159324
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ceroid-lipofuscinosis, neuronal 6 transcript_id : NM_001033175.2

name	Calml4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129956 GeneID:75600 MGI:1922850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calmodulin-like 4 transcript_id : NM_138304.2

name	Larp6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981025 CCDS:CCDS23258.1 GeneID:67557 MGI:1914807
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006405 - RNA export from nucleus [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA] codon_start : 1 product : acheron protein_id : NP_080511.2

name	LOC100040447 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260011 GeneID:100040447
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475321.1

name	Uaca (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28077007 CCDS:CCDS23259.1 GeneID:72565 MGI:1919815
definition	GO_component : GO:0043293 - apoptosome [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005829 - cytosol [Evidence IDA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0005635 - nuclear envelope [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0048471 - perinuclear region [Evidence IDA]; GO:0005625 - soluble fraction [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008630 - DNA damage response, signal transduction resulting in induction of apoptosis [Evidence IMP]; GO:0008631 - induction of apoptosis by oxidative stress [Evidence IMP]; GO:0050728 - negative regulation of inflammatory response [Evidence IMP]; GO:0042347 - negative regulation of NF-kappaB import into nucleus [Evidence IMP]; GO:0043065 - positive regulation of apoptosis [Evidence IMP] [Evidence IDA]; GO:0043280 - positive regulation of caspase activity [Evidence IMP] [Evidence IDA]; GO:0042307 - positive regulation of protein import into nucleus [Evidence IMP]; GO:0009411 - response to UV [Evidence IMP] codon_start : 1 product : nuclear membrane binding protein NUCLING protein_id : NP_082559.1

name	ENSMUSG00000052143 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260013 GeneID:791387 MGI:3642719
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475337.1

name	A430102L10 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259997 GeneID:330956
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473662.1

name	LOC100040481 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260015 GeneID:100040481
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475356.1

name	Tle3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678361 GeneID:21887 MGI:104634
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007222 - frizzled signaling pathway [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : transducin-like enhancer of split 3 product : transducin-like enhancer protein 3 protein_id : NP_033415.1

name	LOC100039851 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259999 GeneID:100039851
definition	codon_start : 1 product : similar to Hmgb1 protein protein_id : XP_001473715.1

name	Rplp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9256519 CCDS:CCDS23260.1 GeneID:56040 MGI:1927099
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA] codon_start : 1 note : acidic ribosomal phosphoprotein P1 product : ribosomal protein, large, P1 protein_id : NP_061341.1

name	Kif23 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29568094 GeneID:71819 MGI:1919069
definition	GO_component : GO:0005874 - microtubule [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA] codon_start : 1 exception : mismatches in translation note : kinesin-like 5 (mitotic kinesin-like protein 1) product : kinesin family member 23 protein_id : NP_077207.2

name	Paqr5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037337 CCDS:CCDS23261.1 GeneID:74090 MGI:1921340
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : membrane progestin receptor gamma protein_id : NP_083024.1

name	Glce (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:65301488 CCDS:CCDS23262.1 GeneID:93683 MGI:2136405
definition	GO_component : GO:0005618 - cell wall [Evidence IEA]; GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016853 - isomerase activity [Evidence IEA]; GO:0016857 - racemase and epimerase activity, acting on carbohydrates and derivatives [Evidence IMP] [Evidence IDA] GO_process : GO:0006024 - glycosaminoglycan biosynthesis [Evidence IEA]; GO:0015012 - heparan sulfate proteoglycan biosynthesis [Evidence IDA]; GO:0030210 - heparin biosynthesis [Evidence IDA]; GO:0009252 - peptidoglycan biosynthesis [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA] codon_start : 1 note : heparan sulfate-glucuronic acid C5-epimerase product : D-glucuronyl C5-epimerase protein_id : NP_201577.3

name	Spesp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385180 CCDS:CCDS23263.1 GeneID:66712 MGI:1913962
definition	GO_process : GO:0007275 - development [Evidence IEA] codon_start : 1 product : sperm equatorial segment protein 1 protein_id : NP_079997.1

name	Anp32a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254600 GeneID:11737 MGI:108447
definition	GO_component : GO:0016363 - nuclear matrix [Evidence IPI]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : leucine rich acidic nuclear protein; acidic nuclear phosphoprotein 32; vacidic (leucine-rich) nuclear phosphoprotein 32 family, member A product : acidic (leucine-rich) nuclear phosphoprotein 32 family, member A protein_id : NP_033802.2

name	Coro2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28202047 CCDS:CCDS23264.1 GeneID:235431 MGI:2444283
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] codon_start : 1 note : KIAA0925-like; E130012P22 product : coronin, actin binding protein, 2B protein_id : NP_780693.1

name	Itga11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254395 CCDS:CCDS23265.1 GeneID:319480 MGI:2442114
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007229 - integrin-mediated signaling pathway [Evidence IEA]; GO:0006929 - substrate-bound cell migration [Evidence IMP] codon_start : 1 exception : mismatches in translation note : integrin a11 product : integrin alpha 11 protein_id : NP_795896.3

name	Fem1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753840 CCDS:CCDS23266.1 GeneID:14155 MGI:1335087
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : feminization 1 homolog b protein_id : NP_034323.1

name	Cln6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75677520 CCDS:CCDS23267.1 GeneID:76524 MGI:2159324
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0031987 - locomotion during locomotory behavior [Evidence IMP]; GO:0007040 - lysosome organization and biogenesis [Evidence IMP]; GO:0007601 - visual perception [Evidence IMP] codon_start : 1 note : neuronal ceroid lipofuscinosis product : ceroid-lipofuscinosis, neuronal 6 protein_id : NP_001028347.1

name	Calml4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956268 GeneID:75600 MGI:1922850
definition	codon_start : 1 product : calmodulin-like 4 protein_id : NP_612177.1

name	LOC100039897 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039897
definition	number : 1 pseudo : _no_value

name	EG665478 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665478
definition	number : 1 pseudo : _no_value

clone name	MSMg01-396H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432D04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473E07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-408B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070L04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-250C03.b	B6Ng01-250C03.g
ACC	GA057763	GA057764
length	1,192	975
definition	B6Ng01-250C03.b	B6Ng01-250C03.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(61,581,577 - 61,582,744)	(61,713,022 - 61,713,986)
sequence	tatgtaagaacaaccctgccctaccccgtctttagcatttcaaagtccat tttgtcagctcagcgggtcaggacagtctcagactgtcctgtctgtatca gttagcaggaaacagtaatagggtagccattttcaacaataagagattta atgtagggatttttttaaaagaaaatatgagcaagagctggtcatggaat caataaaagatttgccgtgtaaatatcagaacccgagtttaatccccagc acccacagaaccccggatctggggaggcagaggcaggatgaccctgggtt tctttggccagccaatctagccactgagctccaggttcaatgagagaccc tgcctcaaaagacaatgtagaggggccagcaagatgactcagcaggtaaa gtgctgtacaaggcctcatgagacgtttgttcagtccccccagaatccct gtaaaagttgaaagaagagagctgactgcacaagagagtcctctgacctc cacacatgcacatggcaagtacacgcccaaacacacatacatgtgcacat gcacaccacaccacaccacacacatacacacatatcatacacacacatac acacacaccacaccacaccacatcacataccatacacacattcacacacc acaccatacactcatacatacacacacatgcacacatgggcacatatgtg cacatgcacccaccacacacacatccataccacacacagacaaacacaca cacacacaccccataccacacacatacacatcacacacacaccacgcata cacacccccacacacataccacaaacacaccacaccatacacatacacac accatacacacatacataccacaccacacaaacacacacatcccccacac accacaaacacaccatacacatatacataccacacagacacacaccacat ataccacaccacacacacacacaccacaaacacaccatacacacatgcat atacacacagtaatataaataacctaaaaaaaataagatgaagatcaatt gaggtggaacaaccaacatcatctctagtccacaacatatatcataatta cattatacaccccacataacacatacatgaaaacaaaaaggagagaaagt tcatggtgttttgggggttctagaatgcttctgagaaccata	gaattctttggggggactttctccctccttgtccatgactggtctgtgtt cctcctcctgtgctggggtatcttttgtgacattccaatagactggccat taggagctcagtcataccgaaccacaaacgagtctcttccagaaaaacaa agcttcaggcagcagctgaaaggatcagtgcaggcagcacactgatggtc tctgtgggtcttgaatggatttcagatcctatggagccaggagaggaggg gcagtgtattccacagagggtcagaggagtgccattcgcctggccggacc atctgtgaggcccaaggtgaaagtgcaaacagaggccacagatgtctaaa tccactaaagcaggactcatgagcagtctgacctgagaaataggcttatc tgctcatctgaacactcagatctgccaaattatctggagggcgggcctca gtggaggatcttcacaacgattggcatcttgtgttaggacgacacagacc tatggccattgctcctcttcccaccacaactttgatcctctctctgtaaa cactttagtgaagacgtccctgtccccaacacagccccatgtatgcagct gacctccctgtaatatgacctttagtatgcgtcacttgagagaaggctga acaagtcccagatgtgcaggaatcccaggtttctaggttctggaggcttc tggagggagtctggaagaggtgtgtaggctctggtgggcacgcctctctg actctatgtctggggctgctcgctacaagaagagggagaggggctggggg agggaacgtagttggtcaattgatttgaggaccctggattcagtcccaca aagaaacatgtgcattactttgcacgtgttcacacacactcacacaccac acacacacacaccacacacggttgaagaaggtggtggggaggctggtggg ccagaaaaaaaggattacagtggca
quality values	Open. Hide. 5 5 4 6 4 4 5 9 9 6 9 4 4 6 4 7 8 4 5 9 9 9 5 4 6 9 12 9 5 4 7 10 16 4 21 17 18 23 27 25 14 38 22 37 13 14 26 37 39 44 44 50 28 11 10 26 16 24 45 44 38 32 20 38 56 59 59 49 49 49 43 59 56 50 29 25 38 39 36 36 36 43 62 56 59 54 46 59 59 59 59 59 56 51 54 36 49 49 59 54 22 46 59 59 32 59 59 56 62 62 59 62 59 59 49 50 50 36 29 43 46 62 46 46 48 36 50 46 50 59 56 56 49 35 34 46 54 56 59 62 56 54 31 54 56 59 59 49 43 34 34 40 49 59 59 51 62 62 59 59 62 62 62 62 62 59 59 51 59 46 46 59 56 51 51 51 50 36 46 62 50 59 59 59 50 54 50 59 59 62 62 59 62 59 59 62 62 62 62 62 62 59 59 59 59 62 59 62 59 62 59 62 54 59 59 59 59 59 62 59 59 59 62 62 62 59 59 59 56 62 59 59 59 56 50 59 56 62 59 56 56 59 62 62 62 62 62 59 59 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 59 56 56 62 56 62 62 62 62 62 59 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 43 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 35 49 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 44 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 51 62 62 62 62 62 62 62 62 62 56 62 62 62 62 56 62 62 62 47 39 62 62 54 62 56 62 62 62 62 62 62 54 62 62 62 62 47 62 62 62 43 62 62 62 62 62 62 62 56 62 56 62 56 62 54 56 62 62 62 36 39 62 62 56 56 62 62 62 50 56 56 56 56 62 56 56 52 54 52 62 52 52 47 54 62 62 43 62 48 62 52 49 62 62 62 50 46 52 52 62 54 62 62 62 62 52 49 52 35 54 62 52 35 62 62 43 42 52 46 42 52 38 54 52 54 52 52 33 54 32 54 22 58 35 52 40 50 54 54 58 54 54 46 54 58 40 28 58 54 52 52 49 41 58 52 44 31 54 28 54 29 52 33 54 52 41 29 34 52 46 48 31 34 37 37 49 52 50 50 54 34 30 31 29 39 58 27 34 27 27 39 34 42 42 37 30 50 40 52 50 50 49 40 42 37 40 32 46 27 39 54 58 58 58 18 41 33 50 27 50 25 52 24 42 29 31 40 44 58 27 36 24 40 31 49 49 36 46 37 36 49 34 31 29 41 32 50 26 37 21 51 23 50 24 52 25 52 26 26 39 42 50 28 30 26 49 32 47 31 42 22 38 17 23 21 30 32 37 39 32 14 32 25 29 19 49 33 13 18 52 31 42 29 42 18 42 26 44 51 51 39 17 21 25 32 26 39 24 23 20 9 28 31 26 21 26 27 42 32 29 32 32 29 36 31 26 40 33 34 33 36 19 32 24 20 38 19 23 14 18 26 31 31 29 18 33 18 29 16 23 37 31 28 21 31 26 31 18 28 25 15 16 23 31 27 16 30 26 31 21 31 23 27 14 21 9 16 14 27 31 29 25 31 41 27 17 21 27 13 23 35 23 30 25 20 24 29 22 31 21 30 32 32 20 32 22 32 18 31 12 19 10 23 32 28 31 22 17 8 15 12 30 48 10 13 6 23 8 19 30 25 48 44 47 44 41 41 22 19 14 30 11 9 9 6 11 14 8 23 20 15 17 11 16 15 19 9 14 17 8 19 29 15 6 5 10 24 12 15 17 21 16 8 31 8 7 22 7 5 11 7 18 19 10 6 6 6 6 6 20 15 11 10 10 5 15 12 3 4 11 10 7 8 10 6 7 5 13 20 13 8 14 11 5 3 8 17 6 6 5 3 3 3 5 5 5 14 16 8 6 11 11 10 6 11 29 28 19 7 5 23 30 28 15 17 7 16 7 18 8 18 26 20 6 12 6 10 7 7 21 11 7 21 9 21 27 14 5 17 29 30 14 3 1 4 4 2 5 21 11 4 2 1 3 13 6 4 10 5 1 2 4 5 4 4 6 4	Open. Hide. 62 38 56 47 62 62 62 62 62 62 56 56 56 49 49 28 32 49 38 38 56 59 62 62 59 62 62 62 62 62 59 59 62 59 59 62 59 59 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 54 49 49 62 62 62 62 62 62 59 59 56 59 59 59 62 62 62 62 62 59 62 59 54 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 43 42 49 62 62 62 62 62 62 62 56 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 49 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 59 62 59 59 62 59 59 62 62 62 62 62 62 59 59 59 62 48 62 62 62 59 59 62 62 59 56 59 62 62 59 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 59 62 62 59 62 62 62 59 62 59 62 62 62 59 62 59 59 62 59 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 59 62 62 62 59 59 46 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 59 51 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 59 62 62 62 59 56 62 62 62 62 62 62 59 59 62 62 62 62 59 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 56 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 56 62 54 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 56 47 62 62 62 62 62 62 54 54 54 42 47 47 34 62 62 62 56 62 47 54 62 62 62 56 56 62 47 31 54 43 37 56 56 56 56 39 56 62 62 56 47 62 62 47 47 62 62 47 47 56 56 62 54 47 54 62 62 56 47 56 43 56 62 62 56 47 62 62 62 47 56 37 38 56 43 62 62 50 62 50 42 62 62 62 62 47 37 62 43 62 52 43 47 10 43 52 52 52 52 46 43 35 43 38 43 46 39 24 62 42 52 33 42 30 12 22 42 62 54 54 54 52 42 42 33 36 47 62 31 39 39 42 54 54 58 46 52 49 54 52 58 29 58 41 45 39 50 28 54 33 21 10 29 28 44 33 54 50 41 34 44 52 52 28 58 11 58 22 33 29 25 23 35 33 42 47 47 39 35 52 52 39 27 52 52 47 20 32 42 54 41 42 42 42 35 52 40 54 42 46 30 12 15 42 42 52 35 22 30 58 58 8 20 37 33 34 32 46 16 25 15 12 21 13 49 37 37 26 6 37 7 27 34 46 18 48 12 50 54 19 39 34 27 54 48 46 16 33 7 48 34 27 42 27 23 33 23 7 19 19 28 29 16 27 25 17 23 29 31 23 20 50 40 30 42 28 26 15 6 46 24 37 40 16 9 6 43 27 13 24 52 50 44 16 15 14 25 40 24 6 26 41 50 30 7 39 34 32 21 16 13 12 18 11 19 11 26 16 28 28 6 25 14 14 29 16 11 19 6 26 8 26 10 12 6 11 10 25 6 21 6 19 6 9 6 10 24 19 22 6 19 15 50 31 47 11 19 7 7 6 6 27 13 21 6 21 15 16 23 21 19 30 30 19 36 19 29 39 7 16 32 7 37 36 37 8 23 9 31 22 26 11 6 17 14 11 10 12 11 6 9 24 30 23 31 40 26 6 18 9 13 6 14 23 17 15 16 21 21 15 17 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_61581577_61582744
seq2: B6Ng01-250C03.b_30_1192

seq1  CTTT-GCATTTCAAAGTCCATTTTGTCAGCTCAGCGGGTCAGGACAGTCT  49
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCATTTCAAAGTCCATTTTGTCAGCTCAGCGGGTCAGGACAGTCT  50

seq1  CAGACTGTCCTGTCTGTATCAGTTAGCAGGAAACAGTAATAGGGTAGCCA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTGTCCTGTCTGTATCAGTTAGCAGGAAACAGTAATAGGGTAGCCA  100

seq1  TTTTCAACAATAAGAGATTTAATGTAGGGATTTTTTTAAAAGAAAATATG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAACAATAAGAGATTTAATGTAGGGATTTTTTTAAAAGAAAATATG  150

seq1  AGCAAGAGCTGGTCATGGAATCAATAAAAGATTTGCCGTGTAAATATCAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGAGCTGGTCATGGAATCAATAAAAGATTTGCCGTGTAAATATCAG  200

seq1  AACCCGAGTTTAATCCCCAGCACCCACAGAACCCCGGATCTGGGGAGGCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCGAGTTTAATCCCCAGCACCCACAGAACCCCGGATCTGGGGAGGCA  250

seq1  GAGGCAGGATGACCCTGGGTTTCTTTGGCCAGCCAATCTAGCCACTGAGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGATGACCCTGGGTTTCTTTGGCCAGCCAATCTAGCCACTGAGC  300

seq1  TCCAGGTTCAATGAGAGACCCTGCCTCAAAAGACAATGTAGAGGGGCCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGTTCAATGAGAGACCCTGCCTCAAAAGACAATGTAGAGGGGCCAG  350

seq1  CAAGATGACTCAGCAGGTAAAGTGCTGTACAAGGCCTCATGAGACGTTTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGACTCAGCAGGTAAAGTGCTGTACAAGGCCTCATGAGACGTTTG  400

seq1  TTCAGTCCCCCCAGAATCCCTGTAAAAGTTGAAAGAAGAGAGCTGACTGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCCCCCCAGAATCCCTGTAAAAGTTGAAAGAAGAGAGCTGACTGC  450

seq1  ACAAGAGAGTCCTCTGACCTCCACACATGCACATGGCAAGTACACGCCCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGAGTCCTCTGACCTCCACACATGCACATGGCAAGTACACGCCCA  500

seq1  AACACACATACATGTGCACATGCACACCACACCACACCACACACATACAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACATACATGTGCACATGCACACCACACCACACCACACACATACAC  550

seq1  ACATATCATACACACACATACACACACACCACACCACACCACATCACATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATCATACACACACATACACACACACCACACCACACCACATCACATA  600

seq1  CCATACACACATTCACACACCACACCATACACTCATACATACACACACAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACACACATTCACACACCACACCATACACTCATACATACACACACAT  650

seq1  GCACACATGGGCACATATGT-CACATGCACCCACCACACACACATCCATA  698
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GCACACATGGGCACATATGTGCACATGCACCCACCACACACACATCCATA  700

seq1  CCACACACAGACAAACACACACACACACACCCCATACCACACACATACAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACACAGACAAACACACACACACACACCCCATACCACACACATACAC  750

seq1  ATCACACACACACCACGCATACACACCCCCACACACATACCACAAACACA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACACACACCACGCATACACACCCCCACACACATACCACAAACACA  800

seq1  CCACACCATACACATACACACACCATACACACATACATACCACACCACAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACCATACACATACACACACCATACACACATACATACCACACCACAC  850

seq1  AAACACACACATCCCCCACACACCACAAACACACCATACACATATACATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACACACATCCCCCACACACCACAAACACACCATACACATATACATA  900

seq1  CCACACAGACACACACCACATATACCACACCACACACACACACACCACAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAGACACACACCACATATACCACACCACACACACACACACCACAA  950

seq1  ACACACCATACACACATGCATATACACACAGTAATAATAAATAACCT-AA  997
      ||||||||||||||||||||||||||||||||||| ||||||||||| ||
seq2  ACACACCATACACACATGCATATACACACAGTAAT-ATAAATAACCTAAA  999

seq1  AAAAATAAGATTGAGATCAATTGAGGTGG-ACAACCAACATTCATCTCTA  1046
      |||||||||||  |||||||||||||||| |||||||||| |||||||||
seq2  AAAAATAAGATGAAGATCAATTGAGGTGGAACAACCAACA-TCATCTCTA  1048

seq1  GT-CACAACATATATTCATATATACATTTATACA-CACACAT-ACACATA  1093
      || ||||||||||| |||||  |||| ||||||| | ||||| |||||||
seq2  GTCCACAACATATA-TCATAATTACA-TTATACACCCCACATAACACATA  1096

seq1  CATGAAAACAAAAAGGAGAGAAAGTTTCATGGTGTTTTGGGGGTTTCTAA  1143
      |||||||||||||||||||||||| |||||||||||||||||| |||| |
seq2  CATGAAAACAAAAAGGAGAGAAAG-TTCATGGTGTTTTGGGGG-TTCT-A  1143

seq1  GAATGTCTTCTGAGACATCACCATA  1168
      ||||| |||||||||    ||||||
seq2  GAATG-CTTCTGAGA----ACCATA  1163

seq1: chr9_61713022_61713986
seq2: B6Ng01-250C03.g_71_1045 (reverse)

seq1  TGCCACTGTAGTCC--TTTCTCTGGCC--ACAGCCTCCC--CCACCTTC-  43
      |||||||||| |||  ||| |||||||   |||||||||  |||||||| 
seq2  TGCCACTGTAATCCTTTTTTTCTGGCCCACCAGCCTCCCCACCACCTTCT  50

seq1  TCAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAC  93
      ||||| ||||||| ||||||||||||||| ||||||| ||||||||| ||
seq2  TCAACCGTGTGTG-GTGTGTGTGTGTGTG-GTGTGTGAGTGTGTGTGAAC  98

seq1  ACGTGC-AAGT-ATGCACATGTTTCTTTGTGGGACTGAATCCA-GGTCCT  140
      |||||| |||| ||||||||||||||||||||||||||||||| ||||||
seq2  ACGTGCAAAGTAATGCACATGTTTCTTTGTGGGACTGAATCCAGGGTCCT  148

seq1  CAAATCAATTGACCAACTACGTTCCCT-CCCCAGCCCCTCTCCCTCTTCT  189
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CAAATCAATTGACCAACTACGTTCCCTCCCCCAGCCCCTCTCCCTCTTCT  198

seq1  TGTAGCGAGCAG-CCCAGACATAGAGTCAGAGAGGCGTGCCCACCAGAGC  238
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGTAGCGAGCAGCCCCAGACATAGAGTCAGAGAGGCGTGCCCACCAGAGC  248

seq1  CTACACACCTCTTCCAGACTCCCTCCAGAAGCCTCCAGAACCTAGAAACC  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACACCTCTTCCAGACTCCCTCCAGAAGCCTCCAGAACCTAGAAACC  298

seq1  TGGGATTCCTGCACATCTGGGACTTGTTCAGCCTTCTCTCAAGTGACGCA  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTCCTGCACATCTGGGACTTGTTCAGCCTTCTCTCAAGTGACGCA  348

seq1  TACTAAAGGTCATATTACAGGGAGGTCAGCTGCATACATGGGGCTGTGTT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAAGGTCATATTACAGGGAGGTCAGCTGCATACATGGGGCTGTGTT  398

seq1  GGGGACAGGGACGTCTTCACTAAAGTGTTTACAGAGAGAGGATCAAAGTT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACAGGGACGTCTTCACTAAAGTGTTTACAGAGAGAGGATCAAAGTT  448

seq1  GTGGTGGGAAGAGGAGCAATGGCCATAGGTCTGTGTCGTCCTAACACAAG  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGGAAGAGGAGCAATGGCCATAGGTCTGTGTCGTCCTAACACAAG  498

seq1  ATGCCAATCGTTGTGAAGATCCTCCACTGAGGCCCGCCCTCCAGATAATT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAATCGTTGTGAAGATCCTCCACTGAGGCCCGCCCTCCAGATAATT  548

seq1  TGGCAGATCTGAGTGTTCAGATGAGCAGATAAGCCTATTTCTCAGGTCAG  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGATCTGAGTGTTCAGATGAGCAGATAAGCCTATTTCTCAGGTCAG  598

seq1  ACTGCTCATGAGTCCTGCTTTAGTGGATTTAGACATCTGTGGCCTCTGTT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTCATGAGTCCTGCTTTAGTGGATTTAGACATCTGTGGCCTCTGTT  648

seq1  TGCACTTTCACCTTGGGCCTCACAGATGGTCCGGCCAGGCGAATGGCACT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTTTCACCTTGGGCCTCACAGATGGTCCGGCCAGGCGAATGGCACT  698

seq1  CCTCTGACCCTCTGTGGAATACACTGCCCCTCCTCTCCTGGCTCCATAGG  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGACCCTCTGTGGAATACACTGCCCCTCCTCTCCTGGCTCCATAGG  748

seq1  ATCTGAAATCCATTCAAGACCCACAGAGACCATCAGTGTGCTGCCTGCAC  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAATCCATTCAAGACCCACAGAGACCATCAGTGTGCTGCCTGCAC  798

seq1  TGATCCTTTCAGCTGCTGCCTGAAGCTTTGTTTTTCTGGAAGAGACTCGT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTTTCAGCTGCTGCCTGAAGCTTTGTTTTTCTGGAAGAGACTCGT  848

seq1  TTGTGGTTCGGTATGACTGAGCTCCTAATGGCCAGTCTATTGGAATGTCA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGTTCGGTATGACTGAGCTCCTAATGGCCAGTCTATTGGAATGTCA  898

seq1  CAAAAGATACCCCAGCACAGGAGGAGGAACACAGACCAGTCATGGACAAG  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGATACCCCAGCACAGGAGGAGGAACACAGACCAGTCATGGACAAG  948

seq1  GAGGGAGAAAGTCCCCCCAAAGAATTC  965
      |||||||||||||||||||||||||||
seq2  GAGGGAGAAAGTCCCCCCAAAGAATTC  975

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BAC

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Alignment Information