MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-253O14
Chromosome	9 (Build37)
Map Location	25,700,817 - 25,701,956
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100040960, Herpud2, LOC666297, 9130004C02Rik, Sept7, EG666327, 2310005P05Rik
Downstream gene	B3gat1, BC038479, Glb1l3, Gm1110
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040960 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040960
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins

name	Herpud2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80517 MGI:1915393
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666297 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666297
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 ESTs, 21 Proteins pseudo : _no_value

name	9130004C02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626123 MGI:2444340
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 28 ESTs

name	Sept7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235072 MGI:1335094
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG666327 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666327 MGI:3648503
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	2310005P05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67484 MGI:1914734
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B3gat1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76898 MGI:1924148
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC038479 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244757 MGI:2388283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Glb1l3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70893 MGI:1918143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 16 ESTs, 4 Proteins

name	Gm1110 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382064 MGI:2685956
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein

name	LOC100040960 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259846 GeneID:100040960
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins product : similar to UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 transcript_id : XM_001475563.1

name	Herpud2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10181159 GeneID:80517 MGI:1915393
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HERPUD family member 2 transcript_id : NM_020586.1

name	9130004C02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259850 GeneID:626123 MGI:2444340
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 28 ESTs product : RIKEN cDNA 9130004C02 gene transcript_id : XM_001475643.1

name	Sept7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129873 GeneID:235072 MGI:1335094
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : septin 7 transcript_id : NM_009859.3

name	2310005P05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71043967 GeneID:67484 MGI:1914734
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310005P05 gene transcript_id : NM_026189.3

name	B3gat1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30794189 GeneID:76898 MGI:1924148
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) transcript_id : NM_029792.1

name	BC038479 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24418924 GeneID:244757 MGI:2388283
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC038479 transcript_id : NM_153803.1

name	Glb1l3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386033 GeneID:70893 MGI:1918143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 16 ESTs, 4 Proteins product : galactosidase, beta 1 like 3 transcript_id : XM_983469.1

name	Gm1110 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259852 GeneID:382064 MGI:2685956
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein product : gene model 1110, (NCBI) transcript_id : XM_356144.5

name	LOC100040960 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259847 GeneID:100040960
definition	codon_start : 1 product : similar to UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 protein_id : XP_001475613.1

name	Herpud2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10181160 CCDS:CCDS22934.1 GeneID:80517 MGI:1915393
definition	GO_process : GO:0006464 - protein modification [Evidence IEA] codon_start : 1 product : HERPUD family member 2 protein_id : NP_065611.1

name	9130004C02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259851 GeneID:626123 MGI:2444340
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475693.1

name	Sept7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28173550 GeneID:235072 MGI:1335094
definition	GO_component : GO:0019717 - synaptosome [Evidence IDA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA] codon_start : 1 product : cell division cycle 10 homolog protein_id : NP_033989.2

name	2310005P05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71043968 CCDS:CCDS22935.1 GeneID:67484 MGI:1914734
definition	GO_function : GO:0043565 - sequence-specific DNA binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC67484 protein_id : NP_080465.3

name	B3gat1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794190 CCDS:CCDS22936.1 GeneID:76898 MGI:1924148
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015018 - galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity [Evidence IEA]; GO:0015020 - glucuronosyltransferase activity [Evidence TAS]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008499 - UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity [Evidence IDA] codon_start : 1 product : beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) protein_id : NP_084068.1

name	BC038479 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24418925 GeneID:244757 MGI:2388283
definition	GO_component : GO:0009341 - beta-galactosidase complex [Evidence IEA] GO_function : GO:0004565 - beta-galactosidase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0043169 - cation binding [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 product : hypothetical protein LOC244757 protein_id : NP_722498.1

name	Glb1l3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94386034 GeneID:70893 MGI:1918143
definition	codon_start : 1 product : galactosidase, beta 1 like 3 protein_id : XP_988563.1

name	Gm1110 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259853 GeneID:382064 MGI:2685956
definition	codon_start : 1 product : similar to beta-galactosidase-like protein protein_id : XP_356144.5

name	EG666327 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666327
definition	number : 1 pseudo : _no_value

name	EG666327 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666327
definition	number : 2 pseudo : _no_value

name	EG666327 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666327
definition	number : 3 pseudo : _no_value

name	LOC666297 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259849 GeneID:666297
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 ESTs, 21 Proteins product : similar to Ac2-008 pseudo : _no_value transcript_id : XR_032335.1

clone name	MSMg01-512E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336I05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-129N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072O01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-261H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088J17
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-253O14.b	B6Ng01-253O14.g
ACC	GA060517	GA060518
length	1,165	1,137
definition	B6Ng01-253O14.b	B6Ng01-253O14.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattccaaatagactagaccagaaaagaaattcctcctgacacataata atcagaacaacaaatgcactaaataaagatagaatattaaaagcagtaag ggagaaaggtcaagtaaaatataaaggcaggcctatcaggattacaccag acttttcaccagagactatgaaagccagaagatcctagacagatgttata cagaccctaagagaacacaatgccagcccaggctactatatgcggccaaa ctctcaattaccatagatggagaaaccaaagtgttccacaacaaaaccaa attcacacattatctttccactaatccaacacttcaaaggaaaataacag aaaaaaagcaatacaaggactgaaaccgcgccctagaaaaagcaagaaag tttactccctcaacaaaccaaaaagaagacagcaacaagaacagaatgcc aactctaaaaaaaaaaaaaaaataataggaagcaacaattacttttcctt aatatctcttaatatcaatggacgcaagtccccaataaaaagacatagac taacagactggctacacaaacaggacccaacattctactgcttacaggaa acccatctcagggaaaaagacacacactacctcagagagaaaggctggaa aacaattttcaaagcaaatggtctgaagaaacaagctggagtacccattc taatatctaataaaatcgacttccaacccaaagtaatcaaaaaagacaag gagggacacttcatactcatctaaaggtaaaatcctccaagagaaactct caattctgaatatctatgctccaaatgcaaagggcagccacattcataca gagaaaagaaaaaaaaaaaaaacactctgtagtaaagggtcaaagcacac attgcaccctcaacacaataatagtgggagactttcaacgcacccacttt tcatcatgacaagatcgtgaaacagaaagtaacacgacacactgaaacta tggaggtgacgaaataaatgactaacagatatctacagacattttatcta aacaaagatatactccttctcagccatcatgtactctccaaattgaccat aattgtcacaacaggctacgaatcaaaatctgatcgtcatgcaagtctat ccgaaacagtcatga	gaattctttggtgaagcttatgattgtcgtttaaattctgtgtcctgggg tttaggtaagtaatcctcattggcaatttttatttttatttttttgtatg atgagtttattttggaggagagctactgtcttgatctttgatacagcttt tacttttgtgataaggtctggttatgtgtgtttcttttgttagttctgtg tcttacatacaaacagatggtaggggcagagtatataatgtatgtacacc tttggcctaatggctgggtatgacttaggtgtaataaagtcaggacaaag agagctgggttgccatgcagcctgtatatccttgtctttgcctagatatt gtgagtcagatctggggattgatacaggcacatggggagaattagatgga ctcatctgtctagaccctgatgaaaagtaagcaagtatctggctgggaag agagtttgtatatatggaacatgaggagcctatcggtcattaatgtatga gacttttttgagacagagtattgatcttggtcagtggctgtgtcagagtc ctgaaacagggaatcagaagataaataaaaaagtatagggtcaggaggtc ttatacaagctatctcatatgtcaagtaaatttcttaaaatgtagagcat cttagataaagacacacagaacaagtttccctttgcccttccatcaaggt ctctgcaaaatgcttggatttgtctaggtcaaaatagggtatcattatgt tgctctgggtaaccttgaccttactacatagaccataggagcttcaatct cacagtgttctgcttggctttttatcctgagtgcttgaattagaggtatg tacagtcacatatgatggacaacgttaaagacaggatgatatatgaaaat ccctgtgtgatatgtttacttagtgtattctgtgcagatccctggaagca gcataacagtgttctgcttttaagtttttataaggtactttccatactgt gttctaatagtggcttaacttgtttcactctatcagtctcaatgatcctc cttctgtgtcttcaatagaaagttgttgttaatttgtttttggttttgcc tttgtttgattttccgataaagaattgtttaaccctg
quality values	Open. Hide. 58 33 26 32 58 58 32 16 45 58 58 45 58 42 47 62 47 62 47 46 35 38 62 62 62 62 62 62 62 62 47 47 62 56 56 41 46 34 34 56 47 56 56 62 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 59 59 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 34 34 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 54 58 58 58 54 58 58 58 58 52 54 58 58 58 58 58 58 58 58 58 58 58 58 54 58 54 58 54 58 58 58 58 49 58 54 54 54 54 54 52 52 52 58 54 54 45 48 58 47 41 44 58 54 58 58 58 49 58 54 58 58 58 58 54 49 58 50 53 58 51 50 51 54 49 58 51 51 53 52 58 50 54 58 58 51 58 53 58 46 53 53 58 54 58 52 58 58 46 40 58 51 52 51 53 52 58 58 53 53 50 48 51 58 51 54 48 50 50 46 51 58 58 58 50 50 58 49 46 58 52 58 53 52 39 58 51 51 58 58 58 50 50 53 39 41 50 40 52 50 49 51 52 44 43 51 53 50 30 49 39 49 41 51 54 40 39 58 32 58 58 44 49 58 46 35 35 47 38 52 54 49 50 52 41 54 54 49 41 39 42 44 42 54 52 39 50 50 50 50 51 32 54 49 31 40 45 41 49 52 52 53 51 34 31 52 33 38 42 44 30 53 51 38 40 45 52 45 42 39 53 32 37 46 42 35 54 54 37 40 52 30 40 38 52 52 37 45 32 32 47 47 47 31 52 41 33 34 34 34 32 32 42 47 49 49 47 32 32 32 31 31 35 32 46 33 21 52 47 28 26 29 32 30 31 36 35 43 31 31 43 31 28 39 39 33 11 45 13 33 31 23 31 46 46 15 30 38 43 32 25 45 28 32 32 37 19 41 46 28 31 43 34 42 33 31 30 32 31 38 37 24 30 33 31 31 31 36 38 32 31 32 31 31 30 36 31 46 31 31 33 18 11 41 8 12 32 14 26 30 31 31 39 21 39 16 31 30 32 17 12 10 5 7 4 20 4 6 6 13 13 4 12 23 8 5 6 8 5 21 30 18 6 5 13 21 13 10 6 6 7 8 9 19 19 18 31 30 31 25 12 38 27 25 31 32 42 33 24 21 10 12 6 12 10 32 29 34 25 7 8 36 18 12 6 5 7 14 10 12 20 21 13 12 9 6 13 27 22 34 48 34 26 21 33 19 14 39 17 30 14 11 33 16 13 11 11 39 8 11 16 16 38 38 18 17 20 28 13 26 7 7 3 4 8 5 5 7 18 27 27 11 4 3 29 9 10 15 15 19 40 18 15 15 15 7 8 3 3 3 3 7 6 10 10 19 18 16 15 29 12 11 12 14 12 16 16 19 24 15 12 13 13 11 7 21 28 12 9 5 21 17 4 3 3 6 22 16 9 17 8 8 23 10 6 19 16 11 6 6 3 5 15 4 6 22 30 28 7 10 6 8 5 16 24 13 5 5 26 11 3 2 5 4 6 4 3 3 3 6 20 10 9 8 6 9 6 6 7 5 2 7 10 9 11 3 6 11 3 2 4 4 12 12 27 17 8 14 5 6 6 7 3 2 1 3 6 6 10 2 7 4 4 17 14 3 5 7 13 2 1 2 2 5 4 10 6 16 17 17 7 4 6 14 9 4 4 2 5 6 9 15 4 5 10 12 4 5 5 4 6 6 7 21 5 5 5 11 8 8 22 2 2 5 9 4 1 6 4	Open. Hide. 62 49 29 39 62 62 62 62 62 62 47 62 62 54 62 62 62 62 62 62 47 62 59 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 59 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 54 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 41 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 49 58 54 58 58 58 58 58 58 54 58 58 54 58 58 58 58 58 58 58 54 54 58 58 54 42 58 58 54 58 58 58 58 58 58 58 58 54 54 52 54 58 49 52 58 58 58 52 58 58 58 54 54 48 58 58 58 58 58 58 58 58 51 54 52 52 51 58 37 58 49 41 58 58 53 58 58 58 58 58 58 58 52 51 51 53 58 58 48 58 58 58 58 58 52 51 51 58 32 58 54 58 58 58 51 58 49 50 51 37 51 51 49 58 46 58 49 50 58 43 48 46 29 58 58 50 52 58 58 58 58 58 58 40 51 51 53 53 58 58 58 50 52 41 31 58 39 29 51 27 51 51 50 47 39 52 50 46 46 52 58 53 52 50 51 58 41 52 52 50 49 54 52 49 50 50 53 53 45 54 44 43 54 51 52 52 52 53 33 49 44 42 54 32 45 39 54 40 42 35 53 49 51 50 52 34 38 37 34 54 51 52 47 37 42 53 53 53 52 45 54 47 40 42 42 44 35 28 42 47 42 32 51 54 47 40 47 51 32 49 46 31 52 34 52 40 31 44 38 54 40 52 45 47 52 53 31 23 49 49 32 33 53 32 33 31 42 34 24 20 52 53 52 32 52 32 36 32 41 30 31 32 52 53 45 32 52 40 53 41 23 32 36 43 34 33 34 45 34 51 38 42 45 31 45 45 31 31 51 51 29 31 42 24 45 33 32 45 30 24 31 21 42 30 31 31 31 31 29 31 31 31 33 18 21 30 30 29 11 46 32 18 40 31 31 31 27 29 31 31 31 29 24 46 31 34 26 42 33 37 42 31 35 31 31 30 32 31 27 41 46 46 46 46 32 31 28 44 31 31 39 24 23 31 32 25 25 29 31 31 41 25 20 19 31 27 26 21 25 30 32 31 25 36 31 36 34 33 23 39 19 41 31 36 31 27 16 31 28 15 20 15 5 5 7 22 37 31 44 25 31 32 29 21 25 31 13 14 31 31 16 12 19 22 37 26 25 44 48 30 28 27 48 38 30 37 25 33 31 34 38 16 10 15 32 24 48 34 32 30 27 32 31 19 31 34 15 20 28 22 32 32 33 16 28 32 25 14 32 20 19 43 17 17 15 24 7 11 23 34 26 22 21 15 12 16 30 14 4 9 6 9 7 5 20 18 23 28 27 40 38 25 9 23 18 24 34 29 40 28 14 6 6 13 15 18 11 21 28 8 40 8 19 27 5 6 13 25 16 26 9 22 7 20 21 13 21 7 7 14 7 7 27 38 20 27 22 6 11 15 11 14 13 8 30 10 14 7 11 7 13 11 14 21 28 18 6 3 2 9 18 10 16 13 22 11 3 3 7 6 6 17 20 13 3 3 11 9 20 8 12 6 16 18 7 6 23 9 5 14 25 18 5 9 9 23 5 15 12 2 7 10 4 20 10 11 13 2 27 24 22 14 6 8 17 17 24 10 15 7 5 16 26 20 8 5 8 17 8 5 6 28 18 7 17 20 7 4 8 8 13 10 7 8 15 9 7 7 4 12 6 4 8 22 21 15 3 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_25700817_25701956
seq2: B6Ng01-253O14.g_67_1203

seq1  GAATTCTTTGGTGAAGCTTATGATTGTCGTTTAAATTCTGTGTCCTGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGTGAAGCTTATGATTGTCGTTTAAATTCTGTGTCCTGGGG  50

seq1  TTTAGGTAAGTAATCCTCATTGGCAATTTTTATTTTTATTTTTTTGTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGTAAGTAATCCTCATTGGCAATTTTTATTTTTATTTTTTTGTATG  100

seq1  ATGAGTTTATTTTGGAGGAGAGCTACTGTCTTGATCTTTGATACAGCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTTATTTTGGAGGAGAGCTACTGTCTTGATCTTTGATACAGCTTT  150

seq1  TACTTTTGTGATAAGGTCTGGTTATGTGTGTTTCTTTTGTTAGTTCTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTGTGATAAGGTCTGGTTATGTGTGTTTCTTTTGTTAGTTCTGTG  200

seq1  TCTTACATACAAACAGATGGTAGGGGCAGAGTATATAATGTATGTACACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACATACAAACAGATGGTAGGGGCAGAGTATATAATGTATGTACACC  250

seq1  TTTGGCCTAATGGCTGGGTATGACTTAGGTGTAATAAAGTCAGGACAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCCTAATGGCTGGGTATGACTTAGGTGTAATAAAGTCAGGACAAAG  300

seq1  AGAGCTGGGTTGCCATGCAGCCTGTATATCCTTGTCTTTGCCTAGATATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGGGTTGCCATGCAGCCTGTATATCCTTGTCTTTGCCTAGATATT  350

seq1  GTGAGTCAGATCTGGGGATTGATACAGGCACATGGGGAGAATTAGATGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCAGATCTGGGGATTGATACAGGCACATGGGGAGAATTAGATGGA  400

seq1  CTCATCTGTCTAGACCCTGATGAAAAGTAAGCAAGTATCTGGCTGGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTGTCTAGACCCTGATGAAAAGTAAGCAAGTATCTGGCTGGGAAG  450

seq1  AGAGTTTGTATATATGGAACATGAGGAGCCTATCGGTCATTAATGTATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTGTATATATGGAACATGAGGAGCCTATCGGTCATTAATGTATGA  500

seq1  GACTTTTTTGAGACAGAGTATTGATCTTGGTCAGTGGCTGTGTCAGAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTTTGAGACAGAGTATTGATCTTGGTCAGTGGCTGTGTCAGAGTC  550

seq1  CTGAAACAGGGAATCAGAAGATAAATAAAAAAGTATAGGGTCAGGAGGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACAGGGAATCAGAAGATAAATAAAAAAGTATAGGGTCAGGAGGTC  600

seq1  TTATACAAGCTATCTCATATGTCAAGTAAATTTCTTAAAATGTAGAGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACAAGCTATCTCATATGTCAAGTAAATTTCTTAAAATGTAGAGCAT  650

seq1  CTTAGATAAAGACACACAGAACAAGTTTCCCTTTGCCCTTCCATCAAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGATAAAGACACACAGAACAAGTTTCCCTTTGCCCTTCCATCAAGGT  700

seq1  CTCTGCAAAATGCTTGGATTTGTCTAGGTCAAAATAGGGTATCATTATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCAAAATGCTTGGATTTGTCTAGGTCAAAATAGGGTATCATTATGT  750

seq1  TGCTCTGGGTAACCTTGACCTTACTACATAGACCATAGGAGCTTCAATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGGGTAACCTTGACCTTACTACATAGACCATAGGAGCTTCAATCT  800

seq1  CACAGTGTTCTGCTTGGCTTTTTATCCTGAGTGCTTGAATTAGAGGTATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGTTCTGCTTGGCTTTTTATCCTGAGTGCTTGAATTAGAGGTATG  850

seq1  TACAGTCACATATGATGGACAAGGTTAAAGACAGGATGATATATGAAAAT  900
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TACAGTCACATATGATGGACAACGTTAAAGACAGGATGATATATGAAAAT  900

seq1  CCCTGTGTGATATGTTTACTTAGTGTATTCTGTGCAGATCCCTGGAAGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGTGATATGTTTACTTAGTGTATTCTGTGCAGATCCCTGGAAGCA  950

seq1  GCATAACAGGTTGTTCTGCTTTTAAGTTTTTATAAGGTAC-TTCCATACT  999
      |||||||||  ||||||||||||||||||||||||||||| |||||||||
seq2  GCATAACAG--TGTTCTGCTTTTAAGTTTTTATAAGGTACTTTCCATACT  998

seq1  GTGTTCT-ATAGTGGCTTTACTTGTTTCCACTCTATCAGTTCTCAATGAT  1048
      ||||||| |||||||||| |||||||| ||||||||||| ||||||||| 
seq2  GTGTTCTAATAGTGGCTTAACTTGTTT-CACTCTATCAG-TCTCAATGA-  1045

seq1  TCCTCCTTTCCTGTGTCTTCATTAG-AAGTTGTTGTTTATTTTTGTTTTT  1097
      ||||||||  ||||||||||| ||| ||||||||||| |  |||||||||
seq2  TCCTCCTT--CTGTGTCTTCAATAGAAAGTTGTTGTTAA--TTTGTTTTT  1091

seq1  GTTTTTGCTTTGTTTTGATTTTCCCGTAAAG-ATTGTT--ACCCTG  1140
      | |||||| ||  |||||||||||  ||||| ||||||  ||||||
seq2  GGTTTTGCCTTTGTTTGATTTTCCGATAAAGAATTGTTTAACCCTG  1137

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information