BAC Information

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BAC

Clone NameB6Ng01-255F04
Chromosome9 (Build37)
Map Location 64,902,871 - 64,904,017
singlet/doubletsinglet
Overlap geneDpp8
Upstream gene2600006L11Rik, Lctl, Zwilch, Rpl4, Snapc5, Map2k1, Uchl4, Tipin, Dis3l, Megf11, Rab11a, AI115600, F730015K02Rik, Slc24a1, 2010321M09Rik, Ptplad1
Downstream geneNope, Punc, Parp16, Cilp, Clpx, Pdcd7, Gm514, 5430433E21Rik, Rasl12, Ostb, Mtfmt, Spg21, Ankdd1a, Plekhq1, Pif1, LOC100041121, Rbpms2, Oaz2, Zfp609, LOC100041180, Trip4, 2810417H13Rik, Csnk1g1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255F04.bB6Ng01-255F04.g
ACCGA061556GA061557
length1,2561,147
definitionB6Ng01-255F04.b B6Ng01-255F04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataaaaacaaggtcagaaaactgagcacagacacggcatgaca
taagagagtaagaagcagggctggagagagtgtaggatcccaaatttaga
gacccccactctagtccaggaacaggaagcacccacgaacacaagaatcc
tctcttgttgcaaaacgcacgaggttttattggcagagctctgggccgac
acatacctcgtgcaggaggcaggggagtcggccctgaggctcgtaagcta
ggggtttttaaagaagcaaaggaatttgacaaaggcacgggattgattca
ttaacagaaagattaaatgtcagcaaaaaggggcatcagagctttgttcc
ggtgggcttggggcttatctttgttcacataacaaccagttgatgtatat
gactttactcggcgccaaggggtaacagaaaggagattccggccagatgg
tgtgaactttagataagatgaccctgcctttccttggattgaagggagat
tccggccagatggtgttagcttagataatgtagccccatttgtccttgaa
taccttttcatctttacggccaagatgttcttatcaacagccctgccttg
gcatgcctgggggcttgttctgctttgttctcagtcccagatcagggctg
tgggctcctaaacaagttacaatatttcatcttccttcaagagatggtcc
agcatcaaagccacctgctgcgcttccagccaacctgagtttgcttccca
gcatccacatcagccactcacagctgcctgaaaatccggggacctgacgg
ggcctttgtgggcttgagggcacacagcagacacccaacacacatataca
taagtaaaagataaaagtgtggtggcttgaataaattcatgtgtttaaat
gcttggccatcaggagtagcaatgttaagggggtgtgcccttgttggagg
aagtgtgtctctgtgtaggtggggctttggaggttctccttagttcctta
ggctccacccaagttatggaagagagctttcctcctggcctggccttcaa
gaaaagactctttcttaatggttacctgcagaaaacagtctttctctttg
cctgcctcagatcaagaatgtagaatttcttggcctcctcagcaccaggt
ctgctgaatgctatcatgcatctccaactgatgatatgtactggatctct
agaacgtgtagccagctcctcatatacataattttgctctttatataaaa
taggag
gaattctatagcaaaaggcatccttaagtttaagggagctgtgaacattt
tgagttggaatgatggttccagaatggagtagtttgtggcaggaagtaga
tactattgaaatggcagctcaggagtgctgcagctatgaccctgcacata
caggctagtgagcccacagcctcagctctggcttctgtgcttctgagaag
accttcaagagttgtatctagaaactattttttaagttagcaaactatgc
caaatgtactagttttagattgagttttacattttaacataaaaattaga
tataaaataaaaaacatttctctgtttctctatttgaaagcaggcttccc
gtgattcattcaaaacagatgaacatctgttttccttcagctgttaggat
atctctctttggaaaacaaaagtaaagcatgctgtcctccttgcctgggt
agtaagatttgtacggctataagctgtctgtgcttcagagaggacagaga
gagggaggatagatagccttggccatgtcgttctttttgctgtcttccat
ttggaaatgtttacacctcagggtgtgaaatctttgtctaaagtaaaata
aatgtaaaggccaggcagaaacccagcatggttaagtacagcctatcctc
gcactaactgctgatgcttggtcatctatggagtgtgtttattaatgcat
atagtaaattaagctgttcattttgcagatccacgatatttttcatgttt
ttcctcaaactcatgaagatgaaattgagtttatttttgcctctgaatgc
aaaacaggttttcgtcatctgtataaaatcacatccattttaaaggagag
caaatataaacggtccagtggtggactacctgccccaagtaagaagcctt
ccttatttatgtacttaatgtctttatagtttatttgttttgcatatatg
catcatagaccaggatgtgcagtcagaagacagcttgtagaagtcagttc
tgtcctacacgtgtgagttcatgagtgagcttcaaagatgaaacttcaga
catcagacttgatgttcagggccttttaccactgagcatctcaccaggca
catgcccttttttaatatctcaataagcatcaggactggttttcagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_64902871_64904017
seq2: B6Ng01-255F04.g_68_1214

seq1  GAATTCTATAGCAAAAGGCATCCTTAAGTTTAAGGGAGCTGTGAACATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAGCAAAAGGCATCCTTAAGTTTAAGGGAGCTGTGAACATTT  50

seq1  TGAGTTGGAATGATGGTTCCAGAATGGAGTAGTTTGTGGCAGGAAGTAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGGAATGATGGTTCCAGAATGGAGTAGTTTGTGGCAGGAAGTAGA  100

seq1  TACTATTGAAATGGCAGCTCAGGAGTGCTGCAGCTATGACCCTGCACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTGAAATGGCAGCTCAGGAGTGCTGCAGCTATGACCCTGCACATA  150

seq1  CAGGCTAGTGAGCCCACAGCCTCAGCTCTGGCTTCTGTGCTTCTGAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTAGTGAGCCCACAGCCTCAGCTCTGGCTTCTGTGCTTCTGAGAAG  200

seq1  ACCTTCAAGAGTTGTATCTAGAAACTATTTTTTAAGTTAGCAAACTATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCAAGAGTTGTATCTAGAAACTATTTTTTAAGTTAGCAAACTATGC  250

seq1  CAAATGTACTAGTTTTAGATTGAGTTTTACATTTTAACATAAAAATTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTACTAGTTTTAGATTGAGTTTTACATTTTAACATAAAAATTAGA  300

seq1  TATAAAATAAAAAACATTTCTCTGTTTCTCTATTTGAAAGCAGGCTTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATAAAAAACATTTCTCTGTTTCTCTATTTGAAAGCAGGCTTCCC  350

seq1  GTGATTCATTCAAAACAGATGAACATCTGTTTTCCTTCAGCTGTTAGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTCATTCAAAACAGATGAACATCTGTTTTCCTTCAGCTGTTAGGAT  400

seq1  ATCTCTCTTTGGAAAACAAAAGTAAAGCATGCTGTCCTCCTTGCCTGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCTTTGGAAAACAAAAGTAAAGCATGCTGTCCTCCTTGCCTGGGT  450

seq1  AGTAAGATTTGTACGGCTATAAGCTGTCTGTGCTTCAGAGAGGACAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGATTTGTACGGCTATAAGCTGTCTGTGCTTCAGAGAGGACAGAGA  500

seq1  GAGGGAGGATAGATAGCCTTGGCCATGTCGTTCTTTTTGCTGTCTTCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGATAGATAGCCTTGGCCATGTCGTTCTTTTTGCTGTCTTCCAT  550

seq1  TTGGAAATGTTTACACCTCAGGGTGTGAAATCTTTGTCTAAAGTAAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAATGTTTACACCTCAGGGTGTGAAATCTTTGTCTAAAGTAAAATA  600

seq1  AATGTAAAGGCCAGGCAGAAACCCAGCATGGTTAAGTACAGCCTATCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAAGGCCAGGCAGAAACCCAGCATGGTTAAGTACAGCCTATCCTC  650

seq1  GCACTAACTGCTGATGCTTGGTCATCTATGGAGTGTGTTTATTAATGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAACTGCTGATGCTTGGTCATCTATGGAGTGTGTTTATTAATGCAT  700

seq1  ATAGTAAATTAAGCTGTTCATTTTGCAGATCCACGATATTTTTCATGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAAATTAAGCTGTTCATTTTGCAGATCCACGATATTTTTCATGTTT  750

seq1  TTCCTCAAACTCATGAAGATGAAATTGAGTTTATTTTTGCCTCTGAATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAAACTCATGAAGATGAAATTGAGTTTATTTTTGCCTCTGAATGC  800

seq1  AAAACAGGTTTTCGTCATCTGTATAAAATCACATCCATTTTAAAGGAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGGTTTTCGTCATCTGTATAAAATCACATCCATTTTAAAGGAGAG  850

seq1  CAAATATAAACGGTCCAGTGGTGGACTACCTGCCCCAAGTAAGAAGCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATAAACGGTCCAGTGGTGGACTACCTGCCCCAAGTAAGAAGCCTT  900

seq1  CCTTATTTATGTACTTAATGTCTTTATAGTTTATTTGTTTTGCATATATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATTTATGTACTTAATGTCTTTATAGTTTATTTGTTTTGCATATATG  950

seq1  CATCATAGAACAAGGATGTGCAGGTCAGAAGACAGCTTGTAGAAGTCAGT  1000
      |||||||| || |||||||||| |||||||||||||||||||||||||||
seq2  CATCATAG-ACCAGGATGTGCA-GTCAGAAGACAGCTTGTAGAAGTCAGT  998

seq1  TCTGTCCTACACGTGTGAGTTCATGAGTGAGCTTCAAAGATGAAACTCAG  1050
      |||||||||||||||||||||||||||||||||||||||||||||||   
seq2  TCTGTCCTACACGTGTGAGTTCATGAGTGAGCTTCAAAGATGAAACTTCA  1048

seq1  GACATCAGACTTGATGTCAAGGGCCTTTACCCACTGAGCCATCTCACCAG  1100
      |||||||||||||||||  |||||||||  |||||||| |||||||||||
seq2  GACATCAGACTTGATGTTCAGGGCCTTTTACCACTGAG-CATCTCACCAG  1097

seq1  CCACATGCC--TTTTTATATTCTTCATAAGCATCAGGACTTG-TTTCAGT  1147
       ||||||||  ||||||   |||  ||||||||||||||| | |||||||
seq2  GCACATGCCCTTTTTTAATATCTCAATAAGCATCAGGACTGGTTTTCAGT  1147