MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-256J02
Chromosome	9 (Build37)
Map Location	46,489,241 - 46,562,103
singlet/doublet	doublet
Overlap gene	EG667890
Upstream gene	Dscaml1, Cep164, LOC640094, Bace1, Rnf214, Pcsk7, Tagln, Sidt2, Pafah1b2, 2610005M20Rik, BC033915, Apoa1, Apoc3, Apoa4, Apoa5, Zfp259, Bud13, 4931429L15Rik, LOC100042722
Downstream gene	2900052N01Rik, D930036J05, Cadm1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Dscaml1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114873 MGI:2150309
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cep164 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214552 MGI:2384878
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC640094 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:640094
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 51 ESTs, 24 Proteins pseudo : _no_value

name	Bace1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23821 MGI:1346542
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rnf214 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235315 MGI:2444451
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pcsk7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18554 MGI:107421
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tagln (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21345 MGI:106012
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sidt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214597 MGI:2446134
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pafah1b2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18475 MGI:108415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2610005M20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70308 MGI:1917558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs

name	BC033915 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70661 MGI:2446296
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Apoa1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11806 MGI:88049
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Apoc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11814 MGI:88055
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Apoa4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11808 MGI:88051
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Apoa5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66113 MGI:1913363
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp259 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22687 MGI:1330262
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bud13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215051 MGI:2443443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4931429L15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74361 MGI:1921611
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein

name	LOC100042722 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042722
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG667890 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667890 MGI:3644829
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	2900052N01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73040 MGI:1920290
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	D930036J05 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:215467
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Cadm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54725 MGI:1889272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	Dscaml1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486900 GeneID:114873 MGI:2150309
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Down syndrome cell adhesion molecule-like 1 transcript_id : NM_001081270.1

name	Cep164 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487016 GeneID:214552 MGI:2384878
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centrosomal protein 164 transcript_id : NM_001081373.1

name	Bace1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366371 GeneID:23821 MGI:1346542
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : beta-site APP cleaving enzyme 1 transcript_id : NM_011792.4

name	Rnf214 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802103 GeneID:235315 MGI:2444451
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ring finger protein 214 transcript_id : NM_178709.3

name	Pcsk7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112181189 GeneID:18554 MGI:107421
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proprotein convertase subtilisin/kexin type 7 transcript_id : NM_008794.2

name	Tagln (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362320 GeneID:21345 MGI:106012
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transgelin transcript_id : NM_011526.3

name	Sidt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802169 GeneID:214597 MGI:2446134
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SID1 transmembrane family, member 2 transcript_id : NM_172257.2

name	Pafah1b2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71067117 GeneID:18475 MGI:108415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : platelet-activating factor acetylhydrolase, isoform 1b, alpha2 subunit transcript_id : NM_008775.3

name	2610005M20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259920 GeneID:70308 MGI:1917558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs product : RIKEN cDNA 2610005M20 gene transcript_id : XM_001478675.1

name	BC033915 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51890216 GeneID:70661 MGI:2446296
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC033915 transcript_id : NM_027498.2

name	Apoa1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803330 GeneID:11806 MGI:88049
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apolipoprotein A-I transcript_id : NM_009692.2

name	Apoc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142344172 GeneID:11814 MGI:88055
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apolipoprotein C-III transcript_id : NM_023114.3

name	Apoa4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110347472 GeneID:11808 MGI:88051
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apolipoprotein A-IV transcript_id : NM_007468.2

name	Apoa5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372938 GeneID:66113 MGI:1913363
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : apolipoprotein A-V transcript_id : NM_080434.3

name	Zfp259 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778942 GeneID:22687 MGI:1330262
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 259 transcript_id : NM_011752.2

name	Bud13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130241 GeneID:215051 MGI:2443443
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BUD13 homolog (yeast) transcript_id : NM_146000.2

name	4931429L15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259951 GeneID:74361 MGI:1921611
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 Protein product : RIKEN cDNA 4931429L15 gene transcript_id : XM_001479853.1

name	LOC100042722 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259922 GeneID:100042722
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042722 transcript_id : XM_001478689.1

name	D930036J05 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259953 GeneID:215467
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein D930036J05 transcript_id : XM_001479857.1

name	Cadm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71040101 GeneID:54725 MGI:1889272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell adhesion molecule 1 transcript_id : NM_207675.2

name	Cadm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71040103 GeneID:54725 MGI:1889272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell adhesion molecule 1 transcript_id : NM_018770.3

name	Cadm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71040105 GeneID:54725 MGI:1889272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell adhesion molecule 1 transcript_id : NM_207676.2

name	Cadm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71040106 GeneID:54725 MGI:1889272
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell adhesion molecule 1 transcript_id : NM_001025600.1

name	Dscaml1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486901 GeneID:114873 MGI:2150309
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence ISS]; GO:0016337 - cell-cell adhesion [Evidence IEA]; GO:0007156 - homophilic cell adhesion [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : Down syndrome cell adhesion molecule-like protein product : Down syndrome cell adhesion molecule-like 1 protein_id : NP_001074739.1

name	Cep164 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487017 GeneID:214552 MGI:2384878
definition	codon_start : 1 product : centrosomal protein 164 protein_id : NP_001074842.1

name	Bace1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981412 CCDS:CCDS23135.1 GeneID:23821 MGI:1346542
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0031410 - cytoplasmic vesicle [Evidence IDA]; GO:0005768 - endosome [Evidence ISS]; GO:0005794 - Golgi apparatus [Evidence ISS]; GO:0016021 - integral to membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]; GO:0009049 - aspartic-type signal peptidase activity [Evidence IEA]; GO:0004175 - endopeptidase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004194 - pepsin A activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0050435 - beta-amyloid metabolism [Evidence ISS]; GO:0006509 - membrane protein ectodomain proteolysis [Evidence ISS]; GO:0006508 - proteolysis [Evidence IDA] codon_start : 1 exception : mismatches in translation note : APP beta-secretase product : beta-site APP cleaving enzyme 1 protein_id : NP_035922.3

name	Rnf214 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520119 CCDS:CCDS23136.1 GeneID:235315 MGI:2444451
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : ring finger protein 214 protein_id : NP_848824.1

name	Pcsk7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112181190 GeneID:18554 MGI:107421
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]; GO:0004289 - subtilase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : proprotein convertase subtilisin/kexin type 7 protein_id : NP_032820.2

name	Tagln (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755714 CCDS:CCDS23137.1 GeneID:21345 MGI:106012
definition	GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IMP]; GO:0007517 - muscle development [Evidence IEA] codon_start : 1 note : SM-22 alpha product : transgelin protein_id : NP_035656.1

name	Sidt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26986551 CCDS:CCDS23138.1 GeneID:214597 MGI:2446134
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : SID1 transmembrane family, member 2 protein_id : NP_758461.1

name	Pafah1b2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254624 CCDS:CCDS23139.1 GeneID:18475 MGI:108415
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0003847 - 1-alkyl-2-acetylglycerophosphocholine esterase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IMP] [Evidence IGI] codon_start : 1 product : platelet-activating factor acetylhydrolase, isoform 1b, alpha2 subunit protein_id : NP_032801.2

name	2610005M20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259921 GeneID:70308 MGI:1917558
definition	codon_start : 1 product : hypothetical protein LOC70308 protein_id : XP_001478725.1

name	BC033915 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51890217 CCDS:CCDS23140.1 GeneID:70661 MGI:2446296
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC70661 protein_id : NP_081774.2

name	Apoa1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753096 GeneID:11806 MGI:88049
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0008289 - lipid binding [Evidence IEA]; GO:0005319 - lipid transporter activity [Evidence IMP]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008203 - cholesterol metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0006869 - lipid transport [Evidence IEA]; GO:0042157 - lipoprotein metabolism [Evidence IEA]; GO:0030300 - regulation of cholesterol absorption [Evidence IDA]; GO:0008202 - steroid metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation function : acts as a cofactor for the lecithin cholesterol acyltransferase product : apolipoprotein A-I protein_id : NP_033822.1

name	Apoc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15421856 CCDS:CCDS23141.1 GeneID:11814 MGI:88055
definition	GO_component : GO:0042627 - chylomicron [Evidence IEA]; GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008289 - lipid binding [Evidence IEA]; GO:0005319 - lipid transporter activity [Evidence IEA] GO_process : GO:0016042 - lipid catabolism [Evidence IEA]; GO:0006869 - lipid transport [Evidence IEA]; GO:0042157 - lipoprotein metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : apolipoprotein C-III protein_id : NP_075603.1

name	Apoa4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110347473 CCDS:CCDS23142.1 GeneID:11808 MGI:88051
definition	GO_component : GO:0042627 - chylomicron [Evidence IEA]; GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008289 - lipid binding [Evidence IEA]; GO:0005319 - lipid transporter activity [Evidence IEA] GO_process : GO:0006869 - lipid transport [Evidence IEA]; GO:0042157 - lipoprotein metabolism [Evidence IEA]; GO:0030300 - regulation of cholesterol absorption [Evidence IMP]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : apolipoprotein A-IV protein_id : NP_031494.2

name	Apoa5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560003 CCDS:CCDS23143.1 GeneID:66113 MGI:1913363
definition	GO_component : GO:0042627 - chylomicron [Evidence IEA]; GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0005319 - lipid transporter activity [Evidence IEA]; GO:0017129 - triglyceride binding [Evidence IDA] GO_process : GO:0042157 - lipoprotein metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : apolipoprotein A-V protein_id : NP_536682.2

name	Zfp259 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6756053 CCDS:CCDS23144.1 GeneID:22687 MGI:1330262
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IDA] codon_start : 1 product : zinc finger protein 259 protein_id : NP_035882.1

name	Bud13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122459 CCDS:CCDS23145.1 GeneID:215051 MGI:2443443
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA] codon_start : 1 product : BUD13 homolog protein_id : NP_666112.1

name	4931429L15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259952 GeneID:74361 MGI:1921611
definition	codon_start : 1 product : hypothetical protein LOC74361 protein_id : XP_001479903.1

name	LOC100042722 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259923 GeneID:100042722
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478739.1

name	D930036J05 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259954 GeneID:215467
definition	codon_start : 1 product : similar to LRRGT00042 protein_id : XP_001479907.1

name	Cadm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71040102 CCDS:CCDS23149.1 GeneID:54725 MGI:1889272
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0030425 - dendrite [Evidence IDA]; GO:0005911 - intercellular junction [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045202 - synapse [Evidence IDA]; GO:0008021 - synaptic vesicle [Evidence IDA] GO_function : GO:0030165 - PDZ domain binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0008022 - protein C-terminus binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IDA]; GO:0005102 - receptor binding [Evidence IPI] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence IDA]; GO:0007155 - cell adhesion [Evidence IDA]; GO:0008037 - cell recognition [Evidence IDA]; GO:0051606 - detection of stimulus [Evidence IDA]; GO:0007157 - heterophilic cell adhesion [Evidence IDA]; GO:0007156 - homophilic cell adhesion [Evidence IDA]; GO:0050715 - positive regulation of cytokine secretion [Evidence ISS]; GO:0042271 - susceptibility to natural killer cell mediated cytotoxicity [Evidence IDA]; GO:0007416 - synaptogenesis [Evidence IDA] codon_start : 1 note : isoform a is encoded by transcript variant 1; immunosuperfamily protein Bl2; immunoglobulin superfamily, member 4A product : immunoglobulin superfamily, member 4A isoform a protein_id : NP_997558.2

name	Cadm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71040104 CCDS:CCDS23148.1 GeneID:54725 MGI:1889272
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0030425 - dendrite [Evidence IDA]; GO:0005911 - intercellular junction [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045202 - synapse [Evidence IDA]; GO:0008021 - synaptic vesicle [Evidence IDA] GO_function : GO:0030165 - PDZ domain binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0008022 - protein C-terminus binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IDA]; GO:0005102 - receptor binding [Evidence IPI] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence IDA]; GO:0007155 - cell adhesion [Evidence IDA]; GO:0008037 - cell recognition [Evidence IDA]; GO:0051606 - detection of stimulus [Evidence IDA]; GO:0007157 - heterophilic cell adhesion [Evidence IDA]; GO:0007156 - homophilic cell adhesion [Evidence IDA]; GO:0050715 - positive regulation of cytokine secretion [Evidence ISS]; GO:0042271 - susceptibility to natural killer cell mediated cytotoxicity [Evidence IDA]; GO:0007416 - synaptogenesis [Evidence IDA] codon_start : 1 note : isoform c is encoded by transcript variant 3; immunosuperfamily protein Bl2; immunoglobulin superfamily, member 4A product : immunoglobulin superfamily, member 4A isoform c protein_id : NP_061240.3

name	Cadm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46575940 CCDS:CCDS23150.1 GeneID:54725 MGI:1889272
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0030425 - dendrite [Evidence IDA]; GO:0005911 - intercellular junction [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045202 - synapse [Evidence IDA]; GO:0008021 - synaptic vesicle [Evidence IDA] GO_function : GO:0030165 - PDZ domain binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0008022 - protein C-terminus binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IDA]; GO:0005102 - receptor binding [Evidence IPI] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence IDA]; GO:0007155 - cell adhesion [Evidence IDA]; GO:0008037 - cell recognition [Evidence IDA]; GO:0051606 - detection of stimulus [Evidence IDA]; GO:0007157 - heterophilic cell adhesion [Evidence IDA]; GO:0007156 - homophilic cell adhesion [Evidence IDA]; GO:0050715 - positive regulation of cytokine secretion [Evidence ISS]; GO:0042271 - susceptibility to natural killer cell mediated cytotoxicity [Evidence IDA]; GO:0007416 - synaptogenesis [Evidence IDA] codon_start : 1 note : isoform b is encoded by transcript variant 2; immunosuperfamily protein Bl2; immunoglobulin superfamily, member 4A product : immunoglobulin superfamily, member 4A isoform b protein_id : NP_997559.1

name	Cadm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71040107 CCDS:CCDS23147.1 GeneID:54725 MGI:1889272
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0016323 - basolateral plasma membrane [Evidence IDA]; GO:0030425 - dendrite [Evidence IDA]; GO:0005911 - intercellular junction [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045202 - synapse [Evidence IDA]; GO:0008021 - synaptic vesicle [Evidence IDA] GO_function : GO:0030165 - PDZ domain binding [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0008022 - protein C-terminus binding [Evidence IPI]; GO:0042803 - protein homodimerization activity [Evidence IDA]; GO:0005102 - receptor binding [Evidence IPI] GO_process : GO:0016338 - calcium-independent cell-cell adhesion [Evidence IDA]; GO:0007155 - cell adhesion [Evidence IDA]; GO:0008037 - cell recognition [Evidence IDA]; GO:0051606 - detection of stimulus [Evidence IDA]; GO:0007157 - heterophilic cell adhesion [Evidence IDA]; GO:0007156 - homophilic cell adhesion [Evidence IDA]; GO:0050715 - positive regulation of cytokine secretion [Evidence ISS]; GO:0042271 - susceptibility to natural killer cell mediated cytotoxicity [Evidence IDA]; GO:0007416 - synaptogenesis [Evidence IDA] codon_start : 1 note : isoform d is encoded by transcript variant 4; immunosuperfamily protein Bl2; immunoglobulin superfamily, member 4A product : immunoglobulin superfamily, member 4A isoform d protein_id : NP_001020771.1

name	EG667890 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667890
definition	number : 2 pseudo : _no_value

name	EG667890 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667890
definition	number : 1 pseudo : _no_value

name	LOC640094 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259950 GeneID:640094
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 51 ESTs, 24 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) pseudo : _no_value transcript_id : XR_034358.1

name	2900052N01Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149259924 GeneID:73040 MGI:1920290
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA 2900052N01 gene transcript_id : XR_035381.1

clone name	MSMg01-110F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301F09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024K06
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-256J02.b	B6Ng01-256J02.g
ACC	GA062493	GA062494
length	1,066	1,076
definition	B6Ng01-256J02.b	B6Ng01-256J02.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(46,561,035 - 46,562,103)	(46,489,241 - 46,490,326)
sequence	gaattcctatgtgtacaagggtggcatcgtgggctaccttaacagtcacc cagaaggttcctctgagttcatgccagaaggtgtcactgtcttgagattc ttaaggcattctttaacaaggggacctgcattttaactcctcactgaggc acattacaaattacatagttcgtcttagacatggtggagagacttgaaac catgtcgcactagaactgtatgaaggcacagaatgtggcagggagaaggg agtcctctgcgctgacatcgtaatcttcaaattcaggagaagaacaaggc tgcttctccaccaccccgggaacagatctcaaaccactagtttctgaggc tcatagtttggcattggtgttgataggcagagcgggaaggcattttacaa actggaactgtgttcaccattggaacctggagagagagaggccaagcatc agggggtcatagcatccttcccggggccttgattctgggctctgtcttaa cggcctgtactgctgcaacaggaacccaggatggatgctttatgtcaaag agaagtgccggcattggagcggagtggggccatcttcagactgtggtgga agatatggtatggttcaaccatgggaagaggagagaaaggggggacaggg agagagaacatcaggtcttctctaaggaaaatcacctactcaggaaagcg gaatctttactagccaaacatctctcactggtcccacttccgggcatcat cacagtgggaattaaaattcaacatgtgttttcaaggggacaaatactca aatcacatacctaggcaatcctttttttttttttttttttggtgttttaa attgacacaaagagtgtgtgcctgtgtgtgtgtgtgtgtaatatgatcat tggtgcagatatgtaatgtataatgatcaaatcaagcaatttccttttcc ttagatatttatcattaatgcattagaactttgaaataccttcttttttc ttctacaggaatatttattaatttctatggaactgcactcacccttctgt gctgtaaaacaccaga	gaattctctctcttccatcctatgtgcatctgggctttagtttcattttt gctgtcgggttctgtgacttcaggttccttctaaaacttaagagtttcct cttctgtaccctcgagagcctcaagcagctatggttactgagaaaacttc catccctgacgtacattttcaggaaacgtctgcacctctacattatcttg tgcaaggacagcacagctgtgtgctgtggctactggactgggggtatctg cacatatgtcgcacacacatacacacatacacaaataaaaataaaaaaat ggcaatcttgataaggaattatctagatcaggttggcccatgggcatgtc tatgggaaccctattgagtgtaaattgatatatgaagacacatcccacta ttggtggcaccattccctaggctgggctctgaattatatgggtgaagaaa gcacataagggtatatatattctcttcctgttttttctgttggtgtgatg tgactagaacttcttgagttcctcccttgatttctttaaaatgctgaact gttgcctggaataaaaatccaaatcaactctttcttcccaaattgctgat tgtcagagcaacaacagcaacaacaaaacccttggcagcatcctggctct ccagcctgccctttaccccttagcactgctggggttctgaacttccctgt cctctaaggcagtgagtggttctcaaccttcctaatgctgtgacccttaa tacagttcctcatgttgtggtaacctcaaccataagattatttttgttgc gggttcataactgtaattttgctatgttttgaatcttaatgcaattatct gtgttttcctgtgatattaggtgaacctgtgaaaaggttgtttgacaccc ccaaaagggttgcagaccacaggttgagaactgctattctaagggtagct tgtcttatgatggagggaactattatttgttctgggtgatgcattcttca gatctagcactgtttgcaagtagcctctgttcttgaagctgaagtcacac aagcttctgaccagatggaacccagc
quality values	Open. 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Hide. 62 47 56 47 62 62 62 62 62 62 56 62 56 38 46 29 24 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 59 62 62 59 59 59 62 62 62 59 62 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 54 62 62 62 59 62 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 38 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 58 58 58 58 54 58 58 58 54 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 46 54 58 58 52 58 54 58 54 41 58 58 58 54 54 58 58 54 58 51 58 58 58 58 58 58 58 58 49 58 53 58 58 58 58 58 58 58 58 58 42 47 58 58 53 58 58 58 46 58 58 58 51 58 49 58 58 58 58 40 58 58 58 54 58 49 58 54 58 54 58 50 50 53 58 58 58 49 51 54 49 50 58 58 49 50 51 58 49 58 54 58 58 49 51 58 58 50 58 37 40 58 53 52 58 51 50 58 54 49 41 58 58 52 51 51 50 58 14 50 50 43 54 39 58 58 53 53 51 54 54 52 41 50 50 38 58 54 50 49 34 42 54 50 54 54 42 53 52 51 49 50 50 49 49 54 51 50 51 53 53 41 41 34 49 54 44 49 54 35 42 51 45 54 44 32 37 33 38 49 40 53 53 34 52 42 33 47 49 45 45 53 49 49 51 33 33 45 45 40 51 29 33 53 53 31 54 42 33 49 31 33 47 45 52 42 41 39 25 46 17 45 40 45 47 40 32 32 47 41 32 45 40 32 34 33 39 37 41 37 44 40 45 34 32 47 29 53 31 32 47 31 38 33 21 49 46 40 32 31 42 35 30 42 39 31 45 37 32 51 42 42 39 31 51 36 42 45 26 31 41 30 42 29 31 42 42 31 28 30 31 31 31 41 32 31 31 30 17 43 31 25 46 47 46 31 37 25 42 31 31 31 41 38 19 22 31 25 36 32 37 32 30 34 31 27 29 28 48 48 37 27 31 36 31 31 31 36 48 47 34 31 32 28 29 31 31 38 36 31 32 35 25 20 24 27 41 34 42 37 31 36 26 32 30 47 46 42 22 32 23 31 22 31 37 27 32 23 25 25 17 14 16 29 25 25 10 18 25 38 17 22 31 48 48 20 13 13 17 25 29 25 41 29 29 24 13 20 32 34 25 22 21 18 43 34 17 7 25 13 31 18 33 34 32 21 37 24 28 20 15 12 17 11 25 19 32 31 16 26 19 21 31 34 32 34 22 29 16 16 18 21 11 25 47 34 16 16 10 29 28 17 21 13 21 21 27 19 17 27 29 20 13 15 18 7 34 7 13 21 23 23 27 15 13 9 9 29 22 5 11 27 28 16 17 34 19 8 11 20 12 28 27 10 21 8 27 20 18 10 7 8 24 6 16 9 21 5 9 4 11 10 14 8 30 24 19 18 8 5 28 13 21 6 20 11 22 10 5 8 11 12 3 3 4 10 11 14 13 21 21 16 16 5 4 9 6 5 6 9 7 4 5 13 5 5 5 6 13 3 1 5 23 8 5 16 9 10 10 4 6 7 22 11 8 4 11

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_46561035_46562103
seq2: B6Ng01-256J02.b_46_1111 (reverse)

seq1  TCTGGTGTTTTACAGCACAGAAGGGTGAGTGCAGTT-CATAGAAATGTAT  49
      |||||||||||||||||||||||||||||||||||| ||||||||| || 
seq2  TCTGGTGTTTTACAGCACAGAAGGGTGAGTGCAGTTCCATAGAAAT-TAA  49

seq1  TATATATTTTCTGTAGAAG-AAAAAGGAGGTATTTCAAAGTTCCTAATGC  98
      || ||| || ||||||||| |||||| ||||||||||||||| |||||||
seq2  TAAATA-TTCCTGTAGAAGAAAAAAGAAGGTATTTCAAAGTT-CTAATGC  97

seq1  ATTAATGATAAATATCTAAGGAAAAGGAAATTGCTTTGATTTGATCATTA  148
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATTAATGATAAATATCTAAGGAAAAGGAAATTGC-TTGATTTGATCATTA  146

seq1  TACATTACATATCTGCACCAAATGATCATATTACACACACACACACACAG  198
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TACATTACATATCTGCACC-AATGATCATATTACACACACACACACACAG  195

seq1  GCACACACTCTTTGTGTCAATTTAAAACACCAAAAAAAAAAAAAAAAAAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACACTCTTTGTGTCAATTTAAAACACCAAAAAAAAAAAAAAAAAAA  245

seq1  GGATTGCCTAGGTATGTGATTTGAGTATTTGTCCCCTTGAAAACACATGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCCTAGGTATGTGATTTGAGTATTTGTCCCCTTGAAAACACATGT  295

seq1  TGAATTTTAATTCCCACTGTGATGATGCCCGGAAGTGGGACCAGTGAGAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTTAATTCCCACTGTGATGATGCCCGGAAGTGGGACCAGTGAGAG  345

seq1  ATGTTTGGCTAGTAAAGATTCCGCTTTCCTGAGTAGGTGATTTTCCTTAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGGCTAGTAAAGATTCCGCTTTCCTGAGTAGGTGATTTTCCTTAG  395

seq1  AGAAGACCTGATGTTCTCTCTCCCTGTCCCCCCTTTCTCTCCTCTTCCCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACCTGATGTTCTCTCTCCCTGTCCCCCCTTTCTCTCCTCTTCCCA  445

seq1  TGGTTGAACCATACCATATCTTCCACCACAGTCTGAAGATGGCCCCACTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGAACCATACCATATCTTCCACCACAGTCTGAAGATGGCCCCACTC  495

seq1  CGCTCCAATGCCGGCACTTCTCTTTGACATAAAGCATCCATCCTGGGTTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCCAATGCCGGCACTTCTCTTTGACATAAAGCATCCATCCTGGGTTC  545

seq1  CTGTTGCAGCAGTACAGGCCGTTAAGACAGAGCCCAGAATCAAGGCCCCG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGCAGCAGTACAGGCCGTTAAGACAGAGCCCAGAATCAAGGCCCCG  595

seq1  GGAAGGATGCTATGACCCCCTGATGCTTGGCCTCTCTCTCTCCAGGTTCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGATGCTATGACCCCCTGATGCTTGGCCTCTCTCTCTCCAGGTTCC  645

seq1  AATGGTGAACACAGTTCCAGTTTGTAAAATGCCTTCCCGCTCTGCCTATC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTGAACACAGTTCCAGTTTGTAAAATGCCTTCCCGCTCTGCCTATC  695

seq1  AACACCAATGCCAAACTATGAGCCTCAGAAACTAGTGGTTTGAGATCTGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCAATGCCAAACTATGAGCCTCAGAAACTAGTGGTTTGAGATCTGT  745

seq1  TCCCGGGGTGGTGGAGAAGCAGCCTTGTTCTTCTCCTGAATTTGAAGATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGGGGTGGTGGAGAAGCAGCCTTGTTCTTCTCCTGAATTTGAAGATT  795

seq1  ACGATGTCAGCGCAGAGGACTCCCTTCTCCCTGCCACATTCTGTGCCTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATGTCAGCGCAGAGGACTCCCTTCTCCCTGCCACATTCTGTGCCTTC  845

seq1  ATACAGTTCTAGTGCGACATGGTTTCAAGTCTCTCCACCATGTCTAAGAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTTCTAGTGCGACATGGTTTCAAGTCTCTCCACCATGTCTAAGAC  895

seq1  GAACTATGTAATTTGTAATGTGCCTCAGTGAGGAGTTAAAATGCAGGTCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTATGTAATTTGTAATGTGCCTCAGTGAGGAGTTAAAATGCAGGTCC  945

seq1  CCTTGTTAAAGAATGCCTTAAGAATCTCAAGACAGTGACACCTTCTGGCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTAAAGAATGCCTTAAGAATCTCAAGACAGTGACACCTTCTGGCA  995

seq1  TGAACTCAGAGGAACCTTCTGGGTGACTGTTAAGGTAGCCCACGATGCCA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCAGAGGAACCTTCTGGGTGACTGTTAAGGTAGCCCACGATGCCA  1045

seq1  CCCTTGTACACATAGGAATTC  1069
      |||||||||||||||||||||
seq2  CCCTTGTACACATAGGAATTC  1066

seq1: chr9_46489241_46490326
seq2: B6Ng01-256J02.g_67_1142

seq1  GAATTCTCTCTCTTCCATCCTATGTGCATCTGGGCTTTAGTTTCATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCTTCCATCCTATGTGCATCTGGGCTTTAGTTTCATTTTT  50

seq1  GCTGTCGGGTTCTGTGACTTCAGGTTCCTTCTAAAACTTAAGAGTTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCGGGTTCTGTGACTTCAGGTTCCTTCTAAAACTTAAGAGTTTCCT  100

seq1  CTTCTGTACCCTCGAGAGCCTCAAGCAGCTATGGTTACTGAGAAAACTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTACCCTCGAGAGCCTCAAGCAGCTATGGTTACTGAGAAAACTTC  150

seq1  CATCCCTGACGTACATTTTCAGGAAACGTCTGCACCTCTACATTATCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTGACGTACATTTTCAGGAAACGTCTGCACCTCTACATTATCTTG  200

seq1  TGCAAGGACAGCACAGCTGTGTGCTGTGGCTACTGGACTGGGGGTATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGGACAGCACAGCTGTGTGCTGTGGCTACTGGACTGGGGGTATCTG  250

seq1  CACATATGTCGCACACACATACACACATACACAAATAAAAATAAAAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATGTCGCACACACATACACACATACACAAATAAAAATAAAAAAAT  300

seq1  GGCAATCTTGATAAGGAATTATCTAGATCAGGTTGGCCCATGGGCATGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATCTTGATAAGGAATTATCTAGATCAGGTTGGCCCATGGGCATGTC  350

seq1  TATGGGAACCCTATTGAGTGTAAATTGATATATGAAGACACATCCCACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGAACCCTATTGAGTGTAAATTGATATATGAAGACACATCCCACTA  400

seq1  TTGGTGGCACCATTCCCTAGGCTGGGCTCTGAATTATATGGGTGAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGCACCATTCCCTAGGCTGGGCTCTGAATTATATGGGTGAAGAAA  450

seq1  GCACATAAGGGTATATATATTCTCTTCCTGTTTTTTCTGTTGGTGTGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATAAGGGTATATATATTCTCTTCCTGTTTTTTCTGTTGGTGTGATG  500

seq1  TGACTAGAACTTCTTGAGTTCCTCCCTTGATTTCTTTAAAATGCTGAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTAGAACTTCTTGAGTTCCTCCCTTGATTTCTTTAAAATGCTGAACT  550

seq1  GTTGCCTGGAATAAAAATCCAAATCAACTCTTTCTTCCCAAATTGCTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCTGGAATAAAAATCCAAATCAACTCTTTCTTCCCAAATTGCTGAT  600

seq1  TGTCAGAGCAACAACAGCAACAACAAAACCCTTGGCAGCATCCTGGCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAGCAACAACAGCAACAACAAAACCCTTGGCAGCATCCTGGCTCT  650

seq1  CCAGCCTGCCCTTTACCCCTTAGCACTGCTGGGGTTCTGAACTTCCCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTGCCCTTTACCCCTTAGCACTGCTGGGGTTCTGAACTTCCCTGT  700

seq1  CCTCTAAGGCAGTGAGTGGTTCTCAACCTTCCTAATGCTGTGACCCTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAAGGCAGTGAGTGGTTCTCAACCTTCCTAATGCTGTGACCCTTAA  750

seq1  TACAGTTCCTCATGTTGTGGTAACCTCAACCATAAGATTATTTTTGTTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTCCTCATGTTGTGGTAACCTCAACCATAAGATTATTTTTGTTGC  800

seq1  GGGTTCATAACTGTAATTTTGCTATGTTTTGAATCTTAATGCAATTATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCATAACTGTAATTTTGCTATGTTTTGAATCTTAATGCAATTATCT  850

seq1  GTGTTTTCCTGTGATATTAGGTGAACCTGTGAAAAGGTTGTTTGACACCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTCCTGTGATATTAGGTGAACCTGTGAAAAGGTTGTTTGACACCC  900

seq1  CCAAAAGGGTTGCAGACCACAGGTTGAGAACTGCTATTCTAAGGGGTAGC  950
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CCAAAAGGGTTGCAGACCACAGGTTGAGAACTGCTATTCTAA-GGGTAGC  949

seq1  TTGTCTTATGATGGAGGGAACTATTATTTGTTCTGGGTGATGCATTCTTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTGTCTTATGATGGAGGGAACTATTATTTGTTCTGGGTGATGCATTCTT-  998

seq1  CAGAATCCTAGCCACTGTTTGCAGGTAGCCCTCTGTTTCCTTGAAGCTGA  1050
      ||||   |||| ||||||||||| |||| ||||||||  |||||||||||
seq2  CAGA--TCTAG-CACTGTTTGCAAGTAG-CCTCTGTT--CTTGAAGCTGA  1042

seq1  GAGTCACAACCAGGCTCTGGCCCAGATGG-ACCCAGC  1086
       |||||||  || |||   | |||||||| |||||||
seq2  -AGTCACA--CAAGCTTCTGACCAGATGGAACCCAGC  1076

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information