MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-257A06
Chromosome	9 (Build37)
Map Location	4,214,850 - 4,375,651
singlet/doublet	doublet
Overlap gene	LOC384912, LOC100039253, Aasdhppt, Kbtbd3, LOC664860
Upstream gene	Olfr369-ps1, Alkbh8, Cwf19l2, LOC384911, Gucy1a2, LOC100039236
Downstream gene	8430410K20Rik, Gria4, EG664889, Casp1, Casp4, Casp12
Link	Open Mouse BAC browser

Click to get alignment info.

name	Olfr369-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:404381 MGI:3030203
definition	note : olfactory receptor 369, pseudogene 1 pseudo : _no_value

name	Alkbh8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67667 MGI:1914917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cwf19l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244672 MGI:1918023
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC384911 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384911
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Gucy1a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234889 MGI:2660877
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039236 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039236
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	LOC384912 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384912
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 Proteins pseudo : _no_value

name	LOC100039253 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039253
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Aasdhppt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67618 MGI:1914868
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kbtbd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69149 MGI:1916399
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC664860 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664860
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	8430410K20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78100 MGI:1925350
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gria4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14802 MGI:95811
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG664889 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664889 MGI:3645154
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 141 ESTs, 7 Proteins pseudo : _no_value

name	Casp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12362 MGI:96544
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Casp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12363 MGI:107700
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Casp12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12364 MGI:1312922
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Alkbh8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61675695 GeneID:67667 MGI:1914917
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alkB, alkylation repair homolog 8 (E. coli) transcript_id : NM_026303.1

name	Cwf19l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802808 GeneID:244672 MGI:1918023
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : CWF19-like 2, cell cycle control (S. pombe) transcript_id : NM_027545.2

name	Gucy1a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:109659842 GeneID:234889 MGI:2660877
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanylate cyclase 1, soluble, alpha 2 transcript_id : NM_001033322.1

name	LOC100039236 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259434 GeneID:100039236
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : similar to pol protein transcript_id : XM_001472505.1

name	Aasdhppt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66773168 GeneID:67618 MGI:1914868
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase transcript_id : NM_026276.2

name	Kbtbd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382668 GeneID:69149 MGI:1916399
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kelch repeat and BTB (POZ) domain containing 3 transcript_id : NM_026962.2

name	8430410K20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21704217 GeneID:78100 MGI:1925350
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 8430410K20 gene transcript_id : NM_145609.1

name	Gria4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130535 GeneID:14802 MGI:95811
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, AMPA4 (alpha 4) transcript_id : NM_019691.3

name	Casp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86198304 GeneID:12362 MGI:96544
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caspase 1 transcript_id : NM_009807.2

name	Casp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6671681 GeneID:12363 MGI:107700
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caspase 4, apoptosis-related cysteine peptidase transcript_id : NM_007609.1

name	Casp12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367382 GeneID:12364 MGI:1312922
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caspase 12 transcript_id : NM_009808.3

name	Alkbh8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61675696 CCDS:CCDS22792.1 GeneID:67667 MGI:1914917
definition	GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : alkB, alkylation repair homolog 8 protein_id : NP_080579.1

name	Cwf19l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30842792 CCDS:CCDS22793.1 GeneID:244672 MGI:1918023
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : CWF19-like 2, cell cycle control protein_id : NP_081821.1

name	Gucy1a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:109659843 GeneID:234889 MGI:2660877
definition	GO_function : GO:0004383 - guanylate cyclase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA] GO_process : GO:0006182 - cGMP biosynthesis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : guanylate cyclase 1, soluble, alpha 2 protein_id : NP_001028494.1

name	LOC100039236 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259435 GeneID:100039236
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001472555.1

name	Aasdhppt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:66773169 CCDS:CCDS22794.1 GeneID:67618 MGI:1914868
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0008897 - phosphopantetheinyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006633 - fatty acid biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase protein_id : NP_080552.2

name	Kbtbd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789183 CCDS:CCDS22795.1 GeneID:69149 MGI:1916399
definition	codon_start : 1 exception : mismatches in translation note : BTB and kelch domain containing 3 product : kelch repeat and BTB (POZ) domain containing 3 protein_id : NP_081238.1

name	8430410K20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704218 CCDS:CCDS22796.1 GeneID:78100 MGI:1925350
definition	codon_start : 1 product : hypothetical protein BC014729 protein_id : NP_663584.1

name	Gria4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254542 CCDS:CCDS22797.1 GeneID:14802 MGI:95811
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005234 - glutamate-gated ion channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : glutamate receptor channel alpha 4; glutamate receptor C; AMPA-selective glutamate receptor 4 (GluR-4) flip product : glutamate receptor, ionotropic, AMPA4 (alpha 4) protein_id : NP_062665.2

name	Casp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86198305 CCDS:CCDS22798.1 GeneID:12362 MGI:96544
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS]; GO:0005576 - extracellular region [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0030693 - caspase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008219 - cell death [Evidence IDA]; GO:0006917 - induction of apoptosis [Evidence IDA] [Evidence IMP] [Evidence IEA]; GO:0016485 - protein processing [Evidence IDA] [Evidence IMP]; GO:0006508 - proteolysis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA]; GO:0001666 - response to hypoxia [Evidence IMP] codon_start : 1 note : IL-1B converting enzyme; interleukin 1 beta-converting enzyme product : caspase 1 protein_id : NP_033937.2

name	Casp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671682 CCDS:CCDS22799.1 GeneID:12363 MGI:107700
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : caspase 4, apoptosis-related cysteine protease; caspase 11, apoptosis-related cysteine protease; caspase 11, apoptosis-related cysteine peptidase product : caspase 11 protein_id : NP_031635.1

name	Casp12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981868 CCDS:CCDS22800.1 GeneID:12364 MGI:1312922
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence TAS]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA]; GO:0030968 - unfolded protein response [Evidence IDA]; GO:0006926 - virus-infected cell apoptosis [Evidence IDA] codon_start : 1 exception : mismatches in translation product : caspase 12 protein_id : NP_033938.2

name	LOC384911 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384911
definition	number : 2 pseudo : _no_value

name	LOC384911 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384911
definition	number : 1 pseudo : _no_value

name	LOC384912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384912
definition	number : 1 pseudo : _no_value

name	LOC384912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384912
definition	number : 2 pseudo : _no_value

name	LOC384912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384912
definition	number : 3 pseudo : _no_value

name	LOC100039253 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039253
definition	number : 4 pseudo : _no_value

name	LOC100039253 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039253
definition	number : 3 pseudo : _no_value

name	LOC100039253 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039253
definition	number : 2 pseudo : _no_value

name	LOC100039253 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039253
definition	number : 1 pseudo : _no_value

name	LOC664860 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664860
definition	number : 1 pseudo : _no_value

name	EG664889 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94385567 GeneID:664889 MGI:3645154
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 141 ESTs, 7 Proteins product : predicted gene, EG664889 pseudo : _no_value transcript_id : XR_001661.1

clone name	MSMg01-506K21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-463M17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-391L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404P19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-510A23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-262P08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-485J20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-051H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532B02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-469O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518D17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-384C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338O02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-120H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044J03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336J16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317A13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080F21
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-257A06.b	B6Ng01-257A06.g
ACC	GA062824	GA062825
length	1,110	1,137
definition	B6Ng01-257A06.b	B6Ng01-257A06.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(4,374,550 - 4,375,651)	(4,214,850 - 4,215,602)
sequence	gaattcattttggaaattcttttttcttttcttttctctcttctctcttc tcttctctctttctttcttgtttgtttggtttttgttttttgttgttgtt gttgttgtttttgtctttttgttttgttttgttttgtttttttgagacag gtagctccggctgtcctggaactcgctctgcagaccaggctggcctcgaa ctcagaaatctgcctgcctctgcttcccaagtgctgggattaaaggcgtg tgccaccactgcccgagaaattattttctaaagtaacctttcctatgcag ttacttcgcagctacttcaatttatctctccaatataagtttgccagatg ggaaggatggcaagctaaatttgaataacaatttcagggtgacattccac attttttatttgttgactctgacaatcatgctcaagtgagatcaaccaca acctatattttccccattatagctctttttttttttttttttttttgcgt agcaaagcttctagcatgtaatagacattttataaaaagatgtaaaagca tgacaaaatgttgtgtgtatataacaagtctttattttttcatataatag tcttttttaaaattaggtatcttctttatttgaatttcaaatgttatccc cttttctggtttcccctctgaaaacttcctatcccttcccccctgcccct gctcaccaacccacccactcctacttcctggctctggcattcctctacac tgaggcatagaaccttcacagggccaagggcctcttcctcccactgatga ccaactaggccatcctctgctacatatgccagcttgagtcatgggttcct ccatgtgtactctttcgggacgtccctggggagcttctggggggtactgg ttgtaacaaatctttaatgttttatttctagaaaattaattgcacaaact atgaagtatttattgaactatgaatctttgaagatcaatgaacagtttaa gaattttttattttaattttgcctaaagagaaaaaaatgatttttgccaa tttgtgagagaataagaaacctttgggtttggaatatttgaaggcaaatc tccctttatg	gaattctgacataggtaagcctccaccagtgttccaacatcctagaaaat ctttgaagccaacgaacgagcttggaattcagtaggaattcagtgagaag gttacctattcagtaacattcagattttcttctagtagagatggtgaaag taattaggcattacaaagaacggagctagaatagctcagggctagtctgc agagtgattacttaggacagtagccaattttacccaaagaagggaataca caatggcctaggcaatagatgggtttatcatgaaagagggaatcccactg agacaggaatgctcactacagcaaggtatagcaggctacattgcattata gacacaagttggtgaattcttctgacaaatggatattccccaaagatact ttaaagaacagccaagttacactcatgcaagaatgtatcaaggcctagga aatagggggttgtggtattgcattattcatgagaaggtctgctagagcag aacctcctgttgctagctttcacaagactcaaatgagtagcacaaattgt gactaggttgtgaaatccttacctgtcattagctgaccctaggcatggct ggtttatctttactgtaaatattacctggttcctgtaagtccttttgaag tcattcctttattttgtgtcaggtaacttcaatgtactttgcctgccatg acatcctacccatttgttttctgtattatataaaactggtgtgcactttg tgaaaatacagtcagattctacacactctctcatgtcacttctgtttgtc attcgcccgactccttgcccacctgcaactagagtcccgtttctacacag acaaggaccaaaaaagggttctgcagcagggcttcaagcgtgggcctgat tatttccccactggatgcaccaagaaacatgatttcctagtgataccgat tttgtggacagctaatggaacaactagtggatgaaaggtttggtaaaagc atttggtgtttcaacttcaacctcttcagaactaagaggatattgaacaa actgctaaaaatataagctttgaaattaccagaatcgagtattaccatac ttaactcagagaagcctgattggaatactgcctgcaa
quality values	Open. Hide. 58 31 27 35 58 34 27 47 62 62 49 62 47 62 62 47 41 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 56 38 38 46 56 49 49 49 46 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 54 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 56 62 62 62 62 62 56 62 46 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 46 38 24 19 24 35 23 24 35 27 41 23 35 41 40 34 38 30 27 42 52 34 47 35 27 43 38 52 35 48 42 42 52 52 52 58 50 52 27 52 54 54 52 34 41 30 40 33 35 46 52 52 28 42 27 34 42 34 32 27 32 52 52 39 52 35 34 34 33 47 33 52 33 33 42 32 50 31 52 29 25 47 52 35 46 42 41 33 46 50 52 54 52 58 41 42 40 32 46 30 48 58 19 27 10 19 32 22 35 35 35 54 30 34 33 37 37 23 34 29 25 42 32 41 26 31 27 34 32 24 42 40 40 33 44 39 42 43 49 27 47 50 46 29 44 58 27 53 32 34 32 32 32 46 50 50 32 14 14 11 18 10 42 42 37 58 52 38 58 40 39 18 26 29 35 50 50 43 50 39 41 54 29 53 18 33 39 41 50 17 26 47 30 40 39 37 50 49 41 45 22 53 25 27 22 24 18 29 25 29 15 41 32 44 17 33 20 31 40 44 29 21 23 42 33 36 32 34 29 37 41 31 24 11 32 45 23 31 16 34 31 53 13 32 39 31 16 40 40 39 29 35 39 17 33 18 29 18 9 33 24 31 38 40 18 52 33 18 28 22 37 33 20 32 16 6 40 18 19 9 7 23 7 46 40 10 47 32 31 28 7 18 15 39 28 32 33 10 31 31 32 18 22 34 22 14 35 27 24 25 31 18 21 31 16 30 16 18 21 31 34 42 31 38 36 34 35 24 14 18 23 16 12 9 6 5 8 24 31 20 33 29 20 11 31 31 17 19 46 33 18 6 27 46 15 25 37 17 25 46 26 33 26 35 32 16 34 15 42 25 32 11 6 19 28 23 22 32 38 43 37 20 23 41 46 8 32 10 22 24 9 11 31 26 46 31 23 30 17 22 21 23 13 14 7 11 46 24 27 32 30 19 13 6 22 18 22 31 46 27 23 21 14 26 13 32 48 8 10 25 47 31 26 20 11 11 21 38 38 38 14 24 13 19 10 27 27 17 13 31 10 33 21 22 18 22 25 32 30 26 19 11 17 14 36 30 7 7 16 32 21 20 10 7 14 29 31 21 19 32 17 13 33 32 18 30 32 18 32 24 22 15 10 9 14 20 25 26 23 7 11 39 25 24 7 6 6 8 17 39 17 29 15 7 5 5 11 5 5 5 11 7 47 33 20 11 15 10 8 14 13 11 16 23 13 15 21 32 16 30 33 21 14 20 27 19 27 28 30 15 12 14 10 11 8 21 21 10 8 8 6 7 5 7 6 6 6 5 3 3 3 3 9 5 5 10 18 29 11 11 27 5 3 3 8 11 7 14 8 4 9 22 26 10 8 10 10 6 9 16 7 1 11 9 6 7 13 16 17 10 22 11 6 23 9	Open. Hide. 62 47 42 47 62 62 62 49 62 62 56 56 44 34 37 33 50 43 32 56 59 62 62 59 43 62 59 59 59 59 62 62 62 62 59 43 62 59 59 62 62 62 59 62 59 59 62 62 62 62 62 62 54 62 62 59 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 42 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 59 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 54 62 62 62 62 62 62 62 62 52 62 46 62 54 52 58 54 58 58 58 58 58 58 58 58 58 58 58 46 49 54 58 58 58 58 58 50 52 54 58 54 54 52 58 58 50 58 58 58 58 58 46 58 58 58 58 58 54 58 58 58 58 58 58 54 58 54 47 54 52 58 58 58 58 58 52 58 58 58 54 54 58 58 58 58 51 47 58 58 58 58 54 52 54 58 52 54 58 58 58 51 49 58 58 58 53 45 58 52 51 47 58 58 53 58 58 51 41 58 58 41 47 58 58 58 49 49 42 51 58 42 50 58 51 53 53 46 58 51 48 58 51 58 51 53 53 53 58 50 58 50 58 49 50 52 46 58 41 58 58 49 50 51 51 50 50 53 42 38 46 50 46 32 58 51 40 41 58 58 54 51 40 49 40 45 50 17 58 27 54 50 52 53 51 37 34 43 38 53 41 42 49 50 58 49 54 50 58 51 52 40 50 41 53 51 33 40 41 53 53 58 39 53 52 58 50 37 54 58 50 41 38 54 54 34 53 39 46 26 37 40 40 45 43 53 39 20 54 49 39 40 38 47 54 45 53 32 49 32 39 49 47 54 50 42 41 50 51 54 54 36 40 27 35 42 40 53 39 33 31 51 18 36 46 37 39 53 51 53 54 46 54 45 51 53 54 42 25 32 38 41 31 22 47 54 54 32 32 45 30 53 45 41 31 32 28 52 35 29 24 26 49 21 18 52 35 37 37 32 27 32 42 30 46 22 32 20 32 32 31 37 34 33 30 33 28 31 35 24 30 24 40 32 21 7 51 8 12 25 30 29 33 31 31 31 33 25 32 29 24 44 31 23 19 12 41 51 51 46 31 20 46 8 11 7 16 24 31 30 29 29 30 29 27 47 36 16 15 27 31 27 23 31 31 29 27 30 40 31 15 31 16 22 20 9 44 25 29 46 28 11 41 46 26 22 31 19 19 32 27 18 31 31 22 32 31 31 19 30 38 48 26 32 24 34 33 34 22 41 7 19 18 14 31 18 21 17 15 17 32 19 25 19 32 28 44 44 33 34 27 27 31 22 27 31 32 32 37 9 10 17 10 28 22 38 22 17 23 32 27 27 15 5 7 23 7 11 31 21 48 9 25 11 26 36 6 13 26 15 30 33 34 33 13 23 9 18 43 7 30 24 15 31 13 27 13 7 4 22 21 25 29 34 15 15 17 16 4 5 5 20 9 6 7 9 8 12 14 14 27 17 31 6 17 8 6 6 4 28 12 13 20 13 10 31 13 5 4 11 5 5 9 30 34 30 8 10 6 9 4 25 16 17 15 22 7 9 9 38 18 7 17 21 15 18 10 16 16 20 23 6 15 20 10 4 13 23 23 7 15 14 12 20 6 27 6 12 16 14 6 11 5 10 14 4 4 6 24 5 7 8 13 6 15 9 6 6 3 4 4 2 5 5 5 6 5 3 2 2 6 5 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_4374550_4375651
seq2: B6Ng01-257A06.b_46_1155 (reverse)

seq1  CATAAAGGG-GATTTTGCTTCAAATATTCCAAAAACCAAAGTGTCTGTAT  49
      ||||||||| |||||  ||||||||||||||||  | || || |||   |
seq2  CATAAAGGGAGATTTGCCTTCAAATATTCCAAACCCAAAGGTTTCTTATT  50

seq1  CTCTTACAAAATGGCAAAAATCATTTTTTTTCTCTTTAGGCAAAATTATA  99
      |||| ||||| |||||||||||| |||||||||||||||||||||||| |
seq2  CTCTCACAAATTGGCAAAAATCA-TTTTTTTCTCTTTAGGCAAAATTAAA  99

seq1  ATAAAAA--TCTTAAAACTGTTCATTGATCTTCAAAGA-TCATAGTTC-A  145
      |||||||  |||| |||||||||||||||||||||||| ||||||||| |
seq2  ATAAAAAATTCTT-AAACTGTTCATTGATCTTCAAAGATTCATAGTTCAA  148

seq1  TAAATACTTCATAGTTTGTGCAATTATTTTTCTAGAAAT-AAACATTAAA  194
      |||||||||||||||||||||||||| |||||||||||| ||||||||||
seq2  TAAATACTTCATAGTTTGTGCAATTAATTTTCTAGAAATAAAACATTAAA  198

seq1  GATTTGTTACAACCAGTA-CCCCCAG-AGCT-CCCAGGGACGTCACCGAA  241
      |||||||||||||||||| ||||||| |||| |||||||||||| |||||
seq2  GATTTGTTACAACCAGTACCCCCCAGAAGCTCCCCAGGGACGTC-CCGAA  247

seq1  AGAGTACACATGGAGGAACCCATGACTCAAGCT-GCATATGTAGCAGAGG  290
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGAGTACACATGGAGGAACCCATGACTCAAGCTGGCATATGTAGCAGAGG  297

seq1  ATGGCCTAGTTGGTCATCAGTGGGAGG-AGAGGCCCTTGGCCCTGTGAAG  339
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ATGGCCTAGTTGGTCATCAGTGGGAGGAAGAGGCCCTTGGCCCTGTGAAG  347

seq1  GTTCTATGCCTCAGTGTAGAGGAATGCCAGAGCCAGGAAGTAGGAGTGGG  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATGCCTCAGTGTAGAGGAATGCCAGAGCCAGGAAGTAGGAGTGGG  397

seq1  TGGGTTGGTGAGCAGGGGCAGGGGGGAAGGGATAGGAAGTTTTCAGAGGG  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGGTGAGCAGGGGCAGGGGGGAAGGGATAGGAAGTTTTCAGAGGG  447

seq1  GAAACCAGGAAAGGGGATAACATTTGAAATTCAAATAAAGAAGATACCTA  489
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCAGAAAAGGGGATAACATTTGAAATTCAAATAAAGAAGATACCTA  497

seq1  ATTTTAAAAAAGACTATTATATGAAAAAATAAAGACTTGTTATATACACA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAAAAGACTATTATATGAAAAAATAAAGACTTGTTATATACACA  547

seq1  CAACATTTTGTCATGCTTTTACATCTTTTTATAAAATGTCTATTACATGC  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTTTGTCATGCTTTTACATCTTTTTATAAAATGTCTATTACATGC  597

seq1  TAGAAGCTTTGCTACGCAAAAAAAAAAAAAAAAAAAAAGAGCTATAATGG  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCTTTGCTACGCAAAAAAAAAAAAAAAAAAAAAGAGCTATAATGG  647

seq1  GGAAAATATAGGTTGTGGTTGATCTCACTTGAGCATGATTGTCAGAGTCA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAATATAGGTTGTGGTTGATCTCACTTGAGCATGATTGTCAGAGTCA  697

seq1  ACAAATAAAAAATGTGGAATGTCACCCTGAAATTGTTATTCAAATTTAGC  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAAAAAATGTGGAATGTCACCCTGAAATTGTTATTCAAATTTAGC  747

seq1  TTGCCATCCTTCCCATCTGGCAAACTTATATTGGAGAGATAAATTGAAGT  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATCCTTCCCATCTGGCAAACTTATATTGGAGAGATAAATTGAAGT  797

seq1  AGCTGCGAAGTAACTGCATAGGAAAGGTTACTTTAGAAAATAATTTCTCG  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCGAAGTAACTGCATAGGAAAGGTTACTTTAGAAAATAATTTCTCG  847

seq1  GGCAGTGGTGGCACACGCCTTTAATCCCAGCACTTGGGAAGCAGAGGCAG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGGTGGCACACGCCTTTAATCCCAGCACTTGGGAAGCAGAGGCAG  897

seq1  GCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTGCAGAGCGAGTTCCAGGA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATTTCTGAGTTCGAGGCCAGCCTGGTCTGCAGAGCGAGTTCCAGGA  947

seq1  CAGCCGGAGCTACCTGTCTCAAAAAAACAAAACAAAACAAAACAAAAAGA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCGGAGCTACCTGTCTCAAAAAAACAAAACAAAACAAAACAAAAAGA  997

seq1  CAAAAACAACAACAACAACAACAAAAAACAAAAACCAAACAAACAAGAAA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACAACAACAACAACAACAAAAAACAAAAACCAAACAAACAAGAAA  1047

seq1  GAAAGAGAGAAGAGAAGAGAGAAGAGAGAAAAGAAAAGAAAAAAGAATTT  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGAGAAGAGAAGAGAGAAGAGAGAAAAGAAAAGAAAAAAGAATTT  1097

seq1  CCAAAATGAATTC  1102
      |||||||||||||
seq2  CCAAAATGAATTC  1110

seq1: chr9_4214850_4215602
seq2: B6Ng01-257A06.g_448_1204

seq1  GGATATTCCCCAAAGATACTTTAAAGAACAGCCAAGTTACACTCATGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTCCCCAAAGATACTTTAAAGAACAGCCAAGTTACACTCATGCAA  50

seq1  GAATGTATCAAGGCCTAGGAAATAGGGGGTTGTGGTATTGCATTATTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTATCAAGGCCTAGGAAATAGGGGGTTGTGGTATTGCATTATTCAT  100

seq1  GAGAAGGTCTGCTAGAGCAGAACCTCCTGTTGCTAGCTTTCACAAGACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGTCTGCTAGAGCAGAACCTCCTGTTGCTAGCTTTCACAAGACTC  150

seq1  AAATGAGTAGCACAAATTGTGACTAGGTTGTGAAATCCTTACCTGTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGTAGCACAAATTGTGACTAGGTTGTGAAATCCTTACCTGTCATT  200

seq1  AGCTGACCCTAGGCATGGCTGGTTTATCTTTACTGTAAATATTACCTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACCCTAGGCATGGCTGGTTTATCTTTACTGTAAATATTACCTGGT  250

seq1  TCCTGTAAGTCCTTTTGAAGTCATTCCTTTATTTTGTGTCAGGTAACTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTAAGTCCTTTTGAAGTCATTCCTTTATTTTGTGTCAGGTAACTTC  300

seq1  AATGTACTTTGCCTGCCATGACATCCTACCCATTTGTTTTCTGTATTATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACTTTGCCTGCCATGACATCCTACCCATTTGTTTTCTGTATTATA  350

seq1  TAAAACTGGTGTGCACTTTGTGAAAATACAGTCAGATTCTACACACTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTGGTGTGCACTTTGTGAAAATACAGTCAGATTCTACACACTCTC  400

seq1  TCATGTCACTTCTGTTTGTCATTCG-CCGACTCCTTGCCCACCTGCAACT  449
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCATGTCACTTCTGTTTGTCATTCGCCCGACTCCTTGCCCACCTGCAACT  450

seq1  AGAGTCCCG-TTCTACACAGACAAGGACCAAAAA--GGGTCTGCAGCAGG  496
      ||||||||| ||||||||||||||||||||||||  || |||||||||||
seq2  AGAGTCCCGTTTCTACACAGACAAGGACCAAAAAAGGGTTCTGCAGCAGG  500

seq1  GCTTCAAGCGTGGGCCTGATTATTT-CCCACTGGATGCACCAAGAAACAT  545
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GCTTCAAGCGTGGGCCTGATTATTTCCCCACTGGATGCACCAAGAAACAT  550

seq1  GA-TTCCTAGTGATACCGATTTTGTGGACAGCT-ATGGAACAACTAGTGG  593
      || |||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GATTTCCTAGTGATACCGATTTTGTGGACAGCTAATGGAACAACTAGTGG  600

seq1  ATG-AAGGTTTGGTAAAAGCATTTGGTGTTTCCAACTTCAACCCTCTTCA  642
      ||| ||||||||||||||||||||||||||| ||||||||| ||||||||
seq2  ATGAAAGGTTTGGTAAAAGCATTTGGTGTTT-CAACTTCAA-CCTCTTCA  648

seq1  G-ACTAAGAGGATATTGAACAAACCTGGCTTAAAATATAAGC-TTGAAAT  690
      | ||||||||||||||||||||||   ||| ||||||||||| |||||||
seq2  GAACTAAGAGGATATTGAACAAAC--TGCTAAAAATATAAGCTTTGAAAT  696

seq1  TAACCAG-ATCGAGTATTACCCATACCTAACTCAGGAGAAG-CTGATT-G  737
      | ||||| ||||||||||| |||||| ||||||| |||||| |||||| |
seq2  T-ACCAGAATCGAGTATTA-CCATACTTAACTCA-GAGAAGCCTGATTGG  743

seq1  AGTACTGCCACTGCAA  753
      | ||||||  ||||||
seq2  AATACTGC--CTGCAA  757

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BAC

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Alignment Information