BAC Information

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BAC

Clone NameB6Ng01-260P16
Chromosome9 (Build37)
Map Location 39,431,997 - 39,432,822
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933, Olfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1, Olfr950-ps1, Olfr951, Olfr952, Olfr953-ps1, Olfr954, Olfr955, Olfr956-ps1, Olfr44, Olfr957, Olfr958, Olfr959, AW551984, Olfr148, Olfr960
Downstream geneOlfr961, GA_x5J8B7W60AJ-4787-4010, Olfr963, Olfr964-ps1, Olfr149, Olfr965, Olfr966-ps1, Olfr150, Olfr967, Olfr968, Olfr969, Olfr970, Olfr971, Olfr972, Olfr973, LOC100043015, Olfr974, Olfr975, Olfr976, Olfr977-ps1, Olfr978, Olfr979, Olfr980, Olfr981, 1700001J11Rik, Olfr982, Olfr983, Olfr984, Olfr985, 1700030E15Rik, LOC235279, Olfr986, Zfp202, Scn3b, Gramd1b, LOC270148
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260P16.bB6Ng01-260P16.g
ACCGA065762GA065763
length8261,093
definitionB6Ng01-260P16.b B6Ng01-260P16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcattcaaaaatggagttgtgcaaggatttgaacatctttgaa
ggaagacccccttactcatatagcatacagatacaagggcattcattctg
caggaacaaccagcatgcagaagtcaaccattcttccatatggccaccaa
aggcacacaagccttcttatgaagaactagggaaactctctggaaaggtt
tggtagtctctaatgttattggtaggggacaaagtggctacattattata
actttgattggctactatgttagttcttctatttttagagatcctgttag
gtgatctaaaatttcactggtgggatgttggggagaccaaaggggttggc
ttctgattggcttatgccaggtggtcagtggtcttcgttcatatctcaca
accatttgattacaggataagatagagctgcccagcacagatggcctatc
cagtttcttcccattcttgtgattatctctaggctgttctttgggagcag
gttttacgaccttattcctggaatttatgatctgttcctggagctagtga
cttatggcctagttcctgggactgttgactttcttttgttaaaccaggcc
tggtgctaaaatggagacaaatggataaaataaataaggtttataggaag
tccagatgtctacaagaaactcagaaatccaaactaatataagttatatt
taaggcaagcttttcatattatacatctttgcaagatttcaacttggttt
ttgtgcacaacttctgtgattagttatgtctgggtctttgtgtatatata
tatatatatatatatatgtgtgtgag
gaattcagcatagcgacacactattggcttattcaaacattaacagaaag
aacacagtgcatcaggactttgttcctgtgggctgggggcttatctttgt
tcacatagcaaccagttgatgtatgactttacccggcgccaaggggcaat
agacagagggcagattccggccaggtggtgttgacttagataatatagcc
ctgctatgtcttcacagtgccctttatcttatggtcaagatgttcccagg
aatgttttaactacgaggcatacccaggtttgtttttctcttttctcagc
cccaggcagcctctaggctcacaaacaaccagcaatttctgagtacttta
tatgacttacagtcttgaaatttcatctttctttcaacacctagctgatg
agcaattggaaattcatggcttctggaagagaaccagttatctctaagag
agtagtccctagtaagtggacaatgctctaacagaatattggagcagcac
aatatggttttgacgcattctcaaaacatacaaaggacactgagttgaat
gtataagggggagaatggatctgggaggaataagggcagtatgataaata
atatgtacaaaattctcaaatgtgtgtgtatgtgtatgtgtgtgtctaaa
aggatttattaggagaaaattttgttttcttagatttggaatatgtccac
tacttgccattaattagaaaacaatgttccagttctaactttttacatga
attaataaccccatagtttacatttgcaaaaatgttccttatgaatatga
tattttatgtgagtcaaaaaataatatctccttgtcatggggaaaaatag
tataaaattatcagaaaaaacagagttttctactgtaaaggtttttttac
acaccatagattctgatcagtgtttacttctcctcatctccttctacaga
tcttccccaccttccaaaccctccagttccacacttcctattctttctgt
cttagaacaagcagcaatttaaatattagcaacgctaccaacacactaag
cactcagatcaaagaatgagtaggatgaccggaaatgtcgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_39431997_39432822
seq2: B6Ng01-260P16.b_48_873

seq1  GAATTCTTCATTCAAAAATGGAGTTGTGCAAGGATTTGAACATCTTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATTCAAAAATGGAGTTGTGCAAGGATTTGAACATCTTTGAA  50

seq1  GGAAGACCCCCTTACTCATATAGCATACAGATACAAGGGCATTCATTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGACCCCCTTACTCATATAGCATACAGATACAAGGGCATTCATTCTG  100

seq1  CAGGAACAACCAGCATGCAGAAGTCAACCATTCTTCCATATGGCCACCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACAACCAGCATGCAGAAGTCAACCATTCTTCCATATGGCCACCAA  150

seq1  AGGCACACAAGCCTTCTTATGAAGAACTAGGGAAACTCTCTGGAAAGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACACAAGCCTTCTTATGAAGAACTAGGGAAACTCTCTGGAAAGGTT  200

seq1  TGGTAGTCTCTAATGTTATTGGTAGGGGACAAAGTGGCTACATTATTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGTCTCTAATGTTATTGGTAGGGGACAAAGTGGCTACATTATTATA  250

seq1  ACTTTGATTGGCTACTATGTTAGTTCTTCTATTTTTAGAGATCCTGTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGATTGGCTACTATGTTAGTTCTTCTATTTTTAGAGATCCTGTTAG  300

seq1  GTGATCTAAAATTTCACTGGTGGGATGTTGGGGAGACCAAAGGGGTTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCTAAAATTTCACTGGTGGGATGTTGGGGAGACCAAAGGGGTTGGC  350

seq1  TTCTGATTGGCTTATGCCAGGTGGTCAGTGGTCTTCGTTCATATCTCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATTGGCTTATGCCAGGTGGTCAGTGGTCTTCGTTCATATCTCACA  400

seq1  ACCATTTGATTACAGGATAAGATAGAGCTGCCCAGCACAGATGGCCTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTTGATTACAGGATAAGATAGAGCTGCCCAGCACAGATGGCCTATC  450

seq1  CAGTTTCTTCCCATTCTTGTGATTATCTCTAGGCTGTTCTTTGGGAGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCTTCCCATTCTTGTGATTATCTCTAGGCTGTTCTTTGGGAGCAG  500

seq1  GTTTTACGACCTTATTCCTGGAATTTATGATCTGTTCCTGGAGCTAGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACGACCTTATTCCTGGAATTTATGATCTGTTCCTGGAGCTAGTGA  550

seq1  CTTATGGCCTAGTTCCTGGGACTGTTGACTTTCTTTTGTTAAACCAGGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGGCCTAGTTCCTGGGACTGTTGACTTTCTTTTGTTAAACCAGGCC  600

seq1  TGGTGCTAAAATGGAGACAAATGGATAAAATAAATAAGGTTTATAGGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCTAAAATGGAGACAAATGGATAAAATAAATAAGGTTTATAGGAAG  650

seq1  TCCAGATGTCTACAAGAAACTCAGAAATCCAAACTAATATAAGTTATATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGATGTCTACAAGAAACTCAGAAATCCAAACTAATATAAGTTATATT  700

seq1  TAAGGCAAGCTTTTCATATTATACATCTTTGCAAGATTTCAACTTGGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGCAAGCTTTTCATATTATACATCTTTGCAAGATTTCAACTTGGTTT  750

seq1  TTGTGCACAACTTCTGTGATTAGTTATGTCTGGGTCTTTGTGTATATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCACAACTTCTGTGATTAGTTATGTCTGGGTCTTTGTGTATATATA  800

seq1  TATATATATATATATATGTGTGTGTG  826
      |||||||||||||||||||||||| |
seq2  TATATATATATATATATGTGTGTGAG  826