BAC Information

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BAC

Clone NameB6Ng01-261C12
Chromosome9 (Build37)
Map Location 94,121,851 - 94,122,846
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC674371, LOC384967
Downstream geneEG384968, 1190002N15Rik, EG667601, Slc9a9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261C12.bB6Ng01-261C12.g
ACCGA065895GA065896
length1,190995
definitionB6Ng01-261C12.b B6Ng01-261C12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttgtttagctctgagcccattttttagtgggcgttatttgattttctgg
agtccatcttcttgagttctttacatatatattggatattagtcccctat
ctgatttaggttaggtaaagatcctttcccaatctgttggtggccttttt
gtcttattgatgatgtcttttgccttacagaagctttgcaattttatgag
gtcctatttgttgattctttatcttatagcacaagccattgctgttctat
tcaggaatttttcccatgcaccatatcttctaggctttcccccactttct
cctctataagcttcactttctctggttttatgtagagttccttgatccac
ttagatttgatgttagtacaaggagataggaatggatcaagttgcattct
tctacatgttaaccaccagttgtgccagcaccatttgttgaaaatgctgt
cttttttccactggatggttttagctcccttgtcaaagatcaagtgacca
taggtgtgtgggttcaattcttggtcttcaattctattccattggtctac
ttgtctgtcactataccagtaccatgcagtttttatcacaattgctctat
agtacagctttaggtcaggcatggtgattccaccagaggttcttttatca
ttgagaagagtttttgctatccaaggttttttgttattccacatgaattt
gcagattgccctttctaatcagttgaagaattgagttggaattttgaaag
ggattgcattgaatctgtagattgcttttggcaagatagccatttttact
atattgatcctgccaatccatgagcatgggagatctttccatcttctgag
atcttctttaatttctttcttcagagacttgaagttcctatcatacagat
ctttcacttccttagttagagtcacttcaaggtattttatattatttttg
actattgagaagggtgttgtttccctgatttctttctcagcctgttatcc
tttgtgtagagaaaggccattgactgtttgagttaatttttctatcagct
acttcactgaagcttgtttatcagttaaggagttctctggtggattttta
aggtcactataatatacctatccatatcatctggcaaacgtgataggttg
aactctccttccaattggatattcccatagtatactactc

gaattcttgttttaatttgctcatatcatgagttgcatgtttctttgttt
caaatgttgaagcaaccacatattcttggaataaatatctttattatgat
acagccgactccttctattccttcaatttctcttgaaccattgtttacat
tttcttccattttggtttttgtttatctgggtttggctgccctccatcct
gagtttggaaatagcccagcccatcagtttttgcaagaatttgaataaaa
ctggtattagttgtttcttaaattatggtagaagttattgataaactctc
tgactacactttttttcatagcaaagattttaattgcaatttactttcaa
aaagacaaaaggtcattaagttaatgagcaatttaatcagctttgttggt
acttaactttttattttgtctaagttattgatgcattaatattattttct
aactgtttgtatgccttatacagtcatttctttccaaaagtctgcgtgcc
agctgttgttttttaaaatgacttttatttagttgacttttctcttctgg
tttctattttagttttgcagatctttgttttttatctcactgaattgaac
ctaacttacttccttaatcctgtactttaaaattaaagttattgatttca
gaccgttcttttataagggagatctttaaggactgatttcctcctaagta
cattttagtaacatcccattaattctgtagagtttttgccctattggaaa
tgctttctgatttccttggagtctttgactcatagccaatttaaaaatac
atcatttagtttccgacatcttgggctttttaaaaaatatatgtgtcctt
tccaactgatagctctgtggttagagaaccctttgtatgacttcaatact
tataaataaatgaagacttgccttgtggagaagttggtccatctctgtga
tttcagatgatgctgaagagaatgtacattatgatgctatctatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_94121851_94122846
seq2: B6Ng01-261C12.g_66_1060

seq1  GAATTCTTGTTTTAATTTGCTCATATCATGAGTTGCATGTTTCTTTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTTTTAATTTGCTCATATCATGAGTTGCATGTTTCTTTGTTT  50

seq1  CAAATGTTGAAGCAACCACATATTCTTGGAATAAATATCTTTATTATGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTTGAAGCAACCACATATTCTTGGAATAAATATCTTTATTATGAT  100

seq1  ACAGCCGACTCCTTCTATTCCTTCAATTTCTCTTGAACCATTGTTTACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCGACTCCTTCTATTCCTTCAATTTCTCTTGAACCATTGTTTACAT  150

seq1  TTTCTTCCATTTTGGTTTTTGTTTATCTGGGTTTGGCTGCCCTCCATCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCCATTTTGGTTTTTGTTTATCTGGGTTTGGCTGCCCTCCATCCT  200

seq1  GAGTTTGGAAATAGCCCAGCCCATCAGTTTTTGCAAGAATTTGAATAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTGGAAATAGCCCAGCCCATCAGTTTTTGCAAGAATTTGAATAAAA  250

seq1  CTGGTATTAGTTGTTTCTTAAATTATGGTAGAAGTTATTGATAAACTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTATTAGTTGTTTCTTAAATTATGGTAGAAGTTATTGATAAACTCTC  300

seq1  TGACTACACTTTTTTTCATAGCAAAGATTTTAATTGCAATTTACTTTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTACACTTTTTTTCATAGCAAAGATTTTAATTGCAATTTACTTTCAA  350

seq1  AAAGACAAAAGGTCATTAAGTTAATGAGCAATTTAATCAGCTTTGTTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAAAAGGTCATTAAGTTAATGAGCAATTTAATCAGCTTTGTTGGT  400

seq1  ACTTAACTTTTTATTTTGTCTAAGTTATTGATGCATTAATATTATTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACTTTTTATTTTGTCTAAGTTATTGATGCATTAATATTATTTTCT  450

seq1  AACTGTTTGTATGCCTTATACAGTCATTTCTTTCCAAAAGTCTGCGTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTTGTATGCCTTATACAGTCATTTCTTTCCAAAAGTCTGCGTGCC  500

seq1  AGCTGTTGTTTTTTAAAATGACTTTTATTTAGTTGACTTTTCTCTTCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTGTTTTTTAAAATGACTTTTATTTAGTTGACTTTTCTCTTCTGG  550

seq1  TTTCTATTTTAGTTTTGCAGATCTTTGTTTTTTATCTCACTGAATTGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTTTAGTTTTGCAGATCTTTGTTTTTTATCTCACTGAATTGAAC  600

seq1  CTAACTTACTTCCTTAATCCTGTACTTTAAAATTAAAGTTATTGATTTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTACTTCCTTAATCCTGTACTTTAAAATTAAAGTTATTGATTTCA  650

seq1  GACCGTTCTTTTATAAGGGAGATCTTTAAGGACTGATTTCCTCCTAAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCGTTCTTTTATAAGGGAGATCTTTAAGGACTGATTTCCTCCTAAGTA  700

seq1  CATTTTAGTAACATCCCATTAATTCTGTAGAGTTTTTGCCCTATTGGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAGTAACATCCCATTAATTCTGTAGAGTTTTTGCCCTATTGGAAA  750

seq1  TGCTTTCTGATTTCCTTGGAGTCTTTGACTCATAGCCAATTTAAAAATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCTGATTTCCTTGGAGTCTTTGACTCATAGCCAATTTAAAAATAC  800

seq1  ATCATTTAGTTTCCGACATCTTGGGCTTTTTAAAAAATATATGTGTCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTAGTTTCCGACATCTTGGGCTTTTTAAAAAATATATGTGTCCTT  850

seq1  TCCAACTGATAGCTCTGTGGTTAGAGAACCCTTTGTATGACTTCAATACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTGATAGCTCTGTGGTTAGAGAACCCTTTGTATGACTTCAATACT  900

seq1  TATAAATAAATGAAGACTTGCCTTGTGGAGAAGTTGGTCCATCTCTGTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAATAAATGAAGACTTGCCTTGTGGAGAAGTTGGTCCATCTCTGTGA  950

seq1  TTTCAGATGATGCTGAAGAGAAATGTACATTATGATGCTATCTATT  996
      |||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTTCAGATGATGCTGAAGAG-AATGTACATTATGATGCTATCTATT  995


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