MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-261M09
Chromosome	9 (Build37)
Map Location	6,181,112 - 6,182,315
singlet/doublet	singlet
Overlap gene	Pdgfd
Upstream gene	Casp1, Casp4, Casp12, LOC547033, LOC100039361, LOC100039372, LOC664957, LOC676037
Downstream gene	Ddi1, EG664919, LOC100039400, LOC100039418, EG547034, Dync2h1, LOC100039658
Link	Open Mouse BAC browser

Click to get alignment info.

name	Casp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12362 MGI:96544
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Casp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12363 MGI:107700
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Casp12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12364 MGI:1312922
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC547033 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:547033
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100039361 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039361
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100039372 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039372
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC664957 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC676037 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676037
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	Pdgfd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71785 MGI:1919035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ddi1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71829 MGI:1919079
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs, 8 Proteins

name	EG664919 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664919 MGI:3644302
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100039400 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039400
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100039418 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039418
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	EG547034 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:547034 MGI:3643789
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	Dync2h1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110350 MGI:107736
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039658 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039658
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Casp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86198304 GeneID:12362 MGI:96544
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caspase 1 transcript_id : NM_009807.2

name	Casp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6671681 GeneID:12363 MGI:107700
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caspase 4, apoptosis-related cysteine peptidase transcript_id : NM_007609.1

name	Casp12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367382 GeneID:12364 MGI:1312922
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caspase 12 transcript_id : NM_009808.3

name	LOC100039361 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259437 GeneID:100039361
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Mnn4p transcript_id : XM_001472754.1

name	Pdgfd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802185 GeneID:71785 MGI:1919035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : platelet-derived growth factor, D polypeptide transcript_id : NM_027924.2

name	Ddi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94385568 GeneID:71829 MGI:1919079
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs, 8 Proteins product : DDI1, DNA-damage inducible 1, homolog 1 (S. cerevisiae) transcript_id : XM_885770.2

name	EG664919 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94385569 GeneID:664919 MGI:3644302
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG664919 transcript_id : XM_973693.1

name	LOC100039418 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259439 GeneID:100039418
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : similar to pol protein transcript_id : XM_001472846.1

name	EG547034 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259441 GeneID:547034 MGI:3643789
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : predicted gene, EG547034 transcript_id : XM_886250.3

name	Dync2h1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:72534791 GeneID:110350 MGI:107736
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynein cytoplasmic 2 heavy chain 1 transcript_id : NM_029851.2

name	LOC100039658 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259448 GeneID:100039658
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100039658 transcript_id : XM_001473007.1

name	Casp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86198305 CCDS:CCDS22798.1 GeneID:12362 MGI:96544
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS]; GO:0005576 - extracellular region [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0030693 - caspase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008219 - cell death [Evidence IDA]; GO:0006917 - induction of apoptosis [Evidence IDA] [Evidence IMP] [Evidence IEA]; GO:0016485 - protein processing [Evidence IDA] [Evidence IMP]; GO:0006508 - proteolysis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA]; GO:0001666 - response to hypoxia [Evidence IMP] codon_start : 1 note : IL-1B converting enzyme; interleukin 1 beta-converting enzyme product : caspase 1 protein_id : NP_033937.2

name	Casp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671682 CCDS:CCDS22799.1 GeneID:12363 MGI:107700
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : caspase 4, apoptosis-related cysteine protease; caspase 11, apoptosis-related cysteine protease; caspase 11, apoptosis-related cysteine peptidase product : caspase 11 protein_id : NP_031635.1

name	Casp12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981868 CCDS:CCDS22800.1 GeneID:12364 MGI:1312922
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence TAS]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA]; GO:0030968 - unfolded protein response [Evidence IDA]; GO:0006926 - virus-infected cell apoptosis [Evidence IDA] codon_start : 1 exception : mismatches in translation product : caspase 12 protein_id : NP_033938.2

name	LOC100039361 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259438 GeneID:100039361
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472804.1

name	Pdgfd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229137 CCDS:CCDS22801.1 GeneID:71785 MGI:1919035
definition	GO_component : GO:0005615 - extracellular space [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005161 - platelet-derived growth factor receptor binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008283 - cell proliferation [Evidence IEA]; GO:0050875 - cellular physiological process [Evidence ISS]; GO:0050730 - regulation of peptidyl-tyrosine phosphorylation [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 product : platelet-derived growth factor, D polypeptide protein_id : NP_082200.1

name	Ddi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82919834 GeneID:71829 MGI:1919079
definition	codon_start : 1 product : DDI1, DNA-damage inducible 1, homolog 1 protein_id : XP_890863.1

name	EG664919 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94385570 GeneID:664919 MGI:3644302
definition	codon_start : 1 product : hypothetical protein protein_id : XP_978787.1

name	LOC100039418 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259440 GeneID:100039418
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001472896.1

name	EG547034 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259442 GeneID:547034 MGI:3643789
definition	codon_start : 1 product : similar to 5-methyltetrahydrofolate-homocysteine methyltransferase protein_id : XP_891343.3

name	Dync2h1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:72534792 GeneID:110350 MGI:107736
definition	GO_component : GO:0005868 - cytoplasmic dynein complex [Evidence IEA]; GO:0030286 - dynein complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042624 - ATPase activity, uncoupled [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0008105 - asymmetric protein localization [Evidence IMP]; GO:0042384 - cilium biogenesis [Evidence IMP]; GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0009953 - dorsal/ventral pattern formation [Evidence IMP]; GO:0030326 - embryonic limb morphogenesis [Evidence IMP]; GO:0030900 - forebrain development [Evidence IMP]; GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0016485 - protein processing [Evidence IMP] codon_start : 1 note : dynein heavy chain 2; cytoplasmic dynein heavy chain 2 product : dynein, cytoplasmic, heavy chain 2 protein_id : NP_084127.2

name	LOC100039658 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259449 GeneID:100039658
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473057.1

name	LOC547033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547033
definition	number : 1 pseudo : _no_value

name	LOC547033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547033
definition	number : 2 pseudo : _no_value

name	LOC547033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547033
definition	number : 3 pseudo : _no_value

name	LOC100039372 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039372
definition	number : 2 pseudo : _no_value

name	LOC100039372 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039372
definition	number : 1 pseudo : _no_value

name	LOC664957 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664957
definition	number : 1 pseudo : _no_value

name	LOC664957 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664957
definition	number : 2 pseudo : _no_value

name	LOC676037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676037
definition	number : 1 pseudo : _no_value

name	LOC676037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676037
definition	number : 2 pseudo : _no_value

name	LOC676037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676037
definition	number : 3 pseudo : _no_value

name	LOC676037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676037
definition	number : 4 pseudo : _no_value

name	LOC676037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676037
definition	number : 5 pseudo : _no_value

name	LOC100039400 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039400
definition	number : 1 pseudo : _no_value

clone name	MSMg01-105C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373O17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-397C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136D19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-137K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152B18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-062N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336G11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-463I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335H04
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-261M09.b	B6Ng01-261M09.g
ACC	GA066359	GA066360
length	1,194	1,212
definition	B6Ng01-261M09.b	B6Ng01-261M09.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcttattattatataaatgtatatatactttatttcattcattaat attttcctcagaagcatgcttcaccttaggtagctctataaacagaatgc aaacctaccaatcaccccttcccttctcaaagttcatcatgcagactctc tctgaaggctattttccaaactttaatttcttctttggacccttgcatta aataggagaaacagaggcagacggatttctgagttcgaggacagcctggt ctacaaagtgagttccaggacagccagggctatacagagaaaccctgtct caaaaaacaaaacaaaacaaaacaaaacaaaaaaaaaggaggcattactg tttaaaatactgtagctgaccaatgcagtcactgaggagttttctcaaaa gccatcatgatgtgtctgccacagaattgaactatgcattggataaataa aagaattttaaaacaaaaaacaaaatatttcactttattttttacagaat taaagacttaccctaagtaccattgggatcattcattgtaagttttgggt aattaagcaagcaagcaaacaaacaaatcagtgttcaccaaaaagtcaga aacaaaaaatgcaggctggtgggttatttgcccataacaacataaatcag aataaagtcagattttccaggaagaatcagtgagagaaatgaacaggtaa aacacacagaaacacaccagcatttgtaggacatataagagagcaaacca atgtgggagggcactcagcaacacagagcagttgtaggtatggagccaat gtttatttttaaagcaaaatcatttttcaaccacacatgctgcccttgta gataggtcataaaatattacctttcttttcaggcatcctgtttacattaa caggatcctcagaacattttcagatatttctcatttctttcactgataac agaaagaaataaaacataaacatatttttattggatattatattattaaa cttcaatgctatcctggttttccctccccccctgctctatgagggtgctc cccccactcaccttctcactcccatcatatttttagctttcctctatcat gctctcaaagaattaaaataagggactggtgtgatttggtttgtcttcta cacactcattagcatcatctgggagacttgagacggaaaattag	gaattctttgtttagatcattaatctgatcctgattcaattttggtacct ggtatctgtctaggagtttgtacatttcatccaggttttccagttttgct gagcatagccctttgtagtaagatcgaatgatgctttgaatttcctcatg ttctattcttatgtctccctttttgtttctgattttgttaattaggatac tatccctgtgccttctagggagtctggataagggtttatctatcttgttg attttctcaaagaaccagctccttgtttggctgattctttgaatagttct ttttgtttccacttggttgttttcagccctgagtttgaatatttcctgcc gtctactcctatttggtgaatttgcttccttttcttctagagcttttagg tgtgttgtcaagctggtagtgtgtgctctctctagtttctttttggaggc actcagagctatgagttttcctcttcgaaatgctttcattgtgacccata agtttgggtatgttgtagcttcattttcattaaacacttaaaaagttttt catttctttctttatttcttccttgaccaagctattattgagtagagtgt tgttctggttccatgtgaattttggctttctattatttatgttgttattg aagatgacccttagtctggggtgatctgatagaatgaatgggataatttc aatatttttgtatctgttgaggcctgttttgtgaccaattttatggtctg tttcggagaaggtaccatgaggtgctgagaagaaggtatatccttttgtt ttaggaaaaatgttctgtagatatctgttctaatccatttgtttcatgac ttctgttagtttcaatgtgtctctgtttagtttctgtttccaggatctgt ccatttatgagagtggggtgttgaagtctcccactattattgtgtgagtg caatgtgtgttttgacctttactatagtttctttatgatgtgcctgccct tgcatctgaacatagaatattcagaattgagagtcatcttgaagatttac tttgatggagtacaaagtgtcccctcctgtatttttgtgaatactttggg gtggaggtcgaatttatagaaattatagaaagtggctattccagcctggt tcctcgcaacaattgccttaggaaactgctttccacgccacctattatca cctctcagtaga
quality values	Open. Hide. 62 41 31 37 62 62 62 62 56 54 54 62 47 47 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 59 56 43 33 56 59 62 62 49 49 62 62 59 49 62 59 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 49 54 62 62 49 59 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 58 58 58 54 58 58 58 54 58 58 58 58 58 58 58 58 58 58 54 58 58 58 54 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 54 58 58 58 58 58 58 58 58 58 58 54 52 44 49 54 58 58 58 58 58 54 54 58 52 58 58 51 51 52 58 58 58 58 49 42 58 51 51 58 58 51 58 58 58 53 58 58 58 47 54 52 41 58 58 58 53 58 49 33 51 48 44 51 53 58 58 53 53 58 58 51 58 53 50 51 58 30 48 58 58 58 49 58 54 50 51 51 39 58 58 53 52 49 33 53 52 58 58 42 58 37 32 53 58 47 52 58 58 40 54 40 58 49 29 22 43 58 58 50 53 53 58 38 58 58 58 54 52 51 50 49 44 49 50 58 58 52 51 40 49 42 50 51 38 41 54 42 49 54 51 51 40 53 29 52 53 32 38 49 42 52 40 54 32 54 33 53 39 52 37 54 34 30 46 33 33 41 54 42 51 36 51 35 21 54 46 29 32 30 37 42 40 36 41 34 34 47 32 47 31 37 51 26 38 45 32 47 45 52 31 39 21 35 31 31 35 46 46 45 32 33 47 28 32 26 47 21 49 32 42 37 51 51 49 25 23 52 47 32 35 32 49 49 31 31 39 32 31 51 51 51 29 36 32 38 43 34 28 41 30 45 30 31 43 32 43 38 24 46 40 23 32 45 29 35 28 37 26 31 27 46 24 24 30 31 25 46 47 30 28 38 32 32 31 26 26 32 47 31 31 34 46 46 26 31 31 15 46 30 17 30 27 31 31 27 25 46 22 23 31 23 31 31 21 32 27 7 13 12 26 21 31 31 30 30 32 11 37 32 25 22 23 46 48 32 30 20 11 33 9 20 19 47 37 35 32 26 31 24 47 29 31 25 48 37 28 24 31 31 38 31 32 21 20 32 20 22 31 48 26 22 26 43 22 20 19 44 43 26 21 32 26 15 43 31 15 27 32 26 29 48 48 48 33 34 19 21 18 26 6 10 16 9 26 14 25 31 17 25 21 22 15 5 34 19 28 19 25 32 22 25 16 29 24 27 26 28 21 21 27 21 22 19 34 32 14 19 38 17 16 16 31 34 34 34 34 18 9 21 9 23 7 5 11 20 27 32 9 47 27 9 23 13 14 18 29 40 28 29 7 6 18 26 14 17 11 15 15 11 19 15 14 8 7 8 8 27 21 7 13 20 16 7 16 10 16 29 26 3 3 3 4 12 24 11 5 6 5 11 6 3 2 8 10 4 5 4 7 6 9 18 8 14 9 9 20 17 10 13 10 25 30 13 3 6 14 6 22 8 21 20 16 20 10 8 9 5 1 3 3 9 10 10 9 6 10 5 7 7 13 9 8 7 6 5 11 6 6 4 8 5 13 4 15 5 2 1 5 2 4 14 6 4 6 10 15 16 6 7 4 2 2 2 9 6 6 4 9 9 4 5 24 17 26 6 21 15 6 6	Open. Hide. 62 59 51 59 62 62 62 62 62 62 56 56 29 20 28 54 59 33 42 54 42 49 54 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 54 62 59 62 62 62 62 62 62 62 59 62 62 62 62 49 49 54 59 59 62 54 54 54 54 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 59 62 62 62 62 62 62 62 59 59 62 54 54 54 54 62 62 62 62 62 54 54 62 62 62 62 62 62 62 49 54 62 62 59 62 62 59 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 54 62 62 62 62 62 62 62 62 59 62 54 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 58 58 58 58 54 49 58 58 58 58 58 58 58 58 58 46 52 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 54 58 58 54 52 51 58 58 58 58 54 54 58 58 58 58 42 42 45 46 58 54 58 58 54 54 54 54 49 58 58 58 58 54 54 54 58 58 54 58 47 58 58 47 58 58 58 58 58 43 49 48 44 41 58 58 58 58 58 41 47 58 58 54 58 49 48 58 58 54 49 50 51 53 39 53 47 58 48 50 54 53 49 58 58 49 51 53 53 58 51 53 58 52 47 34 58 46 37 41 41 49 39 53 39 49 52 52 58 58 58 58 52 58 41 32 50 51 52 49 39 53 50 58 42 41 54 47 49 40 43 41 39 25 20 32 39 34 54 54 52 54 44 49 52 39 54 54 54 50 51 37 49 49 51 49 51 32 44 42 40 26 51 34 39 39 54 40 49 49 49 51 40 40 40 31 45 33 53 39 54 54 42 38 33 54 54 37 53 38 51 32 54 31 41 41 35 49 17 53 54 26 30 13 33 26 36 31 45 35 33 13 40 31 53 36 45 40 46 18 44 41 22 53 52 12 35 18 28 33 32 32 33 31 27 53 53 47 31 19 51 47 38 30 28 31 31 51 46 46 45 32 42 32 51 45 30 46 25 30 23 37 32 31 31 37 32 29 15 18 31 30 28 29 33 23 18 29 32 47 42 33 18 47 20 30 29 31 32 31 24 38 33 31 29 46 21 32 35 28 33 47 31 36 19 33 29 42 28 37 32 32 31 31 34 41 27 47 19 28 31 31 48 36 42 31 33 16 47 19 21 41 31 30 15 15 24 32 31 31 32 24 17 21 41 47 29 20 32 31 32 18 28 22 32 31 48 48 36 24 29 15 25 22 21 27 27 33 34 37 31 36 27 21 26 32 31 31 22 14 12 29 30 16 32 24 32 17 7 4 24 18 23 22 17 24 7 8 5 10 18 39 39 25 19 32 20 17 13 40 20 21 34 17 17 18 20 25 20 43 18 13 11 43 13 19 9 22 43 9 26 6 19 5 13 19 27 7 47 30 15 14 26 27 21 20 19 11 21 3 6 8 17 13 7 10 17 12 19 16 18 24 16 10 18 16 21 8 16 16 19 8 21 5 10 8 13 16 28 14 8 10 3 3 5 21 8 47 17 30 9 17 47 17 15 14 7 9 4 7 4 9 5 16 5 28 22 9 4 9 6 6 17 28 6 6 7 14 11 9 4 11 23 28 30 28 7 6 6 15 11 6 5 18 14 14 27 5 16 16 26 12 2 2 14 17 5 5 9 21 9 11 4 24 7 8 6 8 6 4 10 12 9 5 8 7 7 4 5 8 21 17 4 4 5 13 5 3 6 7 16 6 6 12 4 6 5 19 5 6 7 14 5 4 6 4 4 4 18 4 12 5 6 13 5 14 7 6 9 8 7 7 3 3 3 5 1 4 5 5 17 29 7 5 3 5 5 6 18 14 4 5 5 14 1 4 14 7 12 5 5 12 5 5 6 4 6 4 2 1 3 4 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_6181112_6182315
seq2: B6Ng01-261M09.b_44_1237 (reverse)

seq1  CTAATTTTCTGTCTCAACTCTCCCAGATGATGGGTTTAAAATGA-TG-GT  48
      ||||||||| ||||||| ||||||||||||||       ||||| || ||
seq2  CTAATTTTCCGTCTCAAGTCTCCCAGATGATG-----CTAATGAGTGTGT  45

seq1  AG-AGACAAACCCAAAATTAACACAGT-CCTTATTTTAAATTCTTTGGAG  96
      || |||||||||  |||| |   |||| ||||||||| |||||||| |||
seq2  AGAAGACAAACC--AAATCACACCAGTCCCTTATTTT-AATTCTTT-GAG  91

seq1  AAGCATGATTAGAGAAAGCCTTAAAATATGATGGGAGTGAGAAGGTGAGT  146
       ||||||| ||||| ||  || ||||||||||||||||||||||||||||
seq2  -AGCATGA-TAGAGGAAAGCTAAAAATATGATGGGAGTGAGAAGGTGAGT  139

seq1  -GGGGGAGCACCCTCATAGAAGCA-GGGGGGAGGGAAAACCAGGATAGCA  194
       |||||||||||||||||| |||| |||||||||||||||||||||||||
seq2  GGGGGGAGCACCCTCATAG-AGCAGGGGGGGAGGGAAAACCAGGATAGCA  188

seq1  TTTGAAGTTTAAATAAATATAATATCCAATAAAAATATGTTTTATGTTTT  244
       |||||||||||   |||||||||||||||||||||||| ||||||||||
seq2  -TTGAAGTTTAA--TAATATAATATCCAATAAAAATATG-TTTATGTTTT  234

seq1  ATTTCTTTCTGTTATCAGTGAAAGAAATGAGAAATATCTGAAAATGTTCT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTCTGTTATCAGTGAAAGAAATGAGAAATATCTGAAAATGTTCT  284

seq1  GAGGATCCTGTTAATGTAAACAGGATGCCTGAAAAGAAAGGTAATATTTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATCCTGTTAATGTAAACAGGATGCCTGAAAAGAAAGGTAATATTTT  334

seq1  ATGACCTATCTACAAGGGCAGCATGTGTGGTTGAAAAATGATTTTGCTTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTATCTACAAGGGCAGCATGTGTGGTTGAAAAATGATTTTGCTTT  384

seq1  AAAAATAAACATTGGCTCCATACCTACAACTGCTCTGTGTTGCTGAGTGC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAACATTGGCTCCATACCTACAACTGCTCTGTGTTGCTGAGTGC  434

seq1  CCTCCCACATTGGTTTGCTCTCTTATATGTCCTACAAATGCTGGTGTGTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCACATTGGTTTGCTCTCTTATATGTCCTACAAATGCTGGTGTGTT  484

seq1  TCTGTGTGTTTTACCTGTTCATTTCTCTCACTGATTCTTCCTGGAAAATC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGTTTTACCTGTTCATTTCTCTCACTGATTCTTCCTGGAAAATC  534

seq1  TGACTTTATTCTGATTTATGTTGTTATGGGCAAATAACCCACCAGCCTGC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTATTCTGATTTATGTTGTTATGGGCAAATAACCCACCAGCCTGC  584

seq1  ATTTTTTGTTTCTGACTTTTTGGTGAACACTGATTTGTTTGTTTGCTTGC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTGTTTCTGACTTTTTGGTGAACACTGATTTGTTTGTTTGCTTGC  634

seq1  TTGCTTAATTACCCAAAACTTACAATGAATGATCCCAATGGTACTTAGGG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTAATTACCCAAAACTTACAATGAATGATCCCAATGGTACTTAGGG  684

seq1  TAAGTCTTTAATTCTGTAAAAAATAAAGTGAAATATTTTGTTTTTTGTTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTTTAATTCTGTAAAAAATAAAGTGAAATATTTTGTTTTTTGTTT  734

seq1  TAAAATTCTTTTATTTATCCAATGCATAGTTCAATTCTGTGGCAGACACA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTCTTTTATTTATCCAATGCATAGTTCAATTCTGTGGCAGACACA  784

seq1  TCATGATGGCTTTTGAGAAAACTCCTCAGTGACTGCATTGGTCAGCTACA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATGGCTTTTGAGAAAACTCCTCAGTGACTGCATTGGTCAGCTACA  834

seq1  GTATTTTAAACAGTAATGCCTCCTTTTTTTTTGTTTTGTTTTGTTTTGTT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTAAACAGTAATGCCTCCTTTTTTTTTGTTTTGTTTTGTTTTGTT  884

seq1  TTGTTTTTTGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTTTGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACT  934

seq1  CACTTTGTAGACCAGGCTGTCCTCGAACTCAGAAATCCGTCTGCCTCTGT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGTAGACCAGGCTGTCCTCGAACTCAGAAATCCGTCTGCCTCTGT  984

seq1  TTCTCCTATTTAATGCAAGGGTCCAAAGAAGAAATTAAAGTTTGGAAAAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTATTTAATGCAAGGGTCCAAAGAAGAAATTAAAGTTTGGAAAAT  1034

seq1  AGCCTTCAGAGAGAGTCTGCATGATGAACTTTGAGAAGGGAAGGGGTGAT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCAGAGAGAGTCTGCATGATGAACTTTGAGAAGGGAAGGGGTGAT  1084

seq1  TGGTAGGTTTGCATTCTGTTTATAGAGCTACCTAAGGTGAAGCATGCTTC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGGTTTGCATTCTGTTTATAGAGCTACCTAAGGTGAAGCATGCTTC  1134

seq1  TGAGGAAAATATTAATGAATGAAATAAAGTATATATACATTTATATAATA  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAAATATTAATGAATGAAATAAAGTATATATACATTTATATAATA  1184

seq1  ATAAGAATTC  1204
      ||||||||||
seq2  ATAAGAATTC  1194

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