BAC Information

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BAC

Clone NameB6Ng01-262B04
Chromosome9 (Build37)
Map Location 19,717,571 - 19,718,550
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr831-ps1, Olfr832, GA_x5J8B7W6RL5-13870817-13871726, Olfr834, Olfr835, Olfr836, Olfr837, GA_x5J8B7W6RL5-13695863-13696754, Olfr839-ps1, GA_x5J8B7W6RL5-13645512-13646298, Olfr841-ps1, Olfr842-ps1, Olfr843, Olfr845, Olfr1522-ps1, Olfr846, LOC665697, Olfr847, GA_x5J8B7W6RL5-13451244-13452122, Olfr849, Olfr850, Olfr851, Olfr852-ps1, Olfr853, Olfr854, Olfr855, Zfp75, EG624341, LOC665751, Olfr857, Olfr858-ps1, Olfr58, Olfr859, Olfr860, GA_x5J8B7W6RL5-13004417-13003354, Olfr862
Downstream geneOlfr77, EG665823, Olfr863-ps1, Olfr864-ps1, Olfr865-ps1, Olfr866, Olfr867, Olfr868, Olfr869, Olfr870, Olfr871, Olfr872, Olfr39, Olfr873, Olfr18, Zfp560, 4921534A09Rik, EG624824, Zfp26, Zfp426, 5730601F06Rik, 7030419G21Rik, LOC100041205, 2210010B09Rik, 5730577I03Rik, Fbxl12, Ubl5, Pin1, Olfm2, Col5a3, Rdh8, A230050P20Rik, Angptl6, Ppan, Eif3s4, Dnmt1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262B04.bB6Ng01-262B04.g
ACCGA066584GA066585
length1,187937
definitionB6Ng01-262B04.b B6Ng01-262B04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaaat
gttcaacatccttaatcatcagtgaaatgcaaatcacaacaaccctgaga
ttccacctcacaccagtcagaatgactaagatcaaaaattcaggtgacag
cagattctggagaagatgtggagaaagaggaacactcctccattgttggt
gggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctc
agaaaattggacatagtactacccgaggatccggcaatacctctcctggg
catatatccagaagatgtcccacccggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacacaggaatagatacagaaaatgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaacttatgaaattcctaagca
aatggatggacctggagggcatcatcctgagtgaggtaacacaatcacaa
aggaactcacacaatatgtaaactaggttttatcaaagaatatctttatt
gattgcagtgaagaacttttcagggtttacatctgtagtctctagccatt
tgtgagacattgtttcaggctcattttgctttcagagtcttaattgagta
ttcaactagaatgatgaaagaagtctttgactcctgtagaatacgatgtc
tataattatttttattatgaaatatttaataagaatgaaaacatatcata
taatgtactatatttgtgggagaatactttaaaatatcatcaaaaatttc
aggaacaaggtatattacattagttgtgcgactgtgcaaaaaggccatga
atctgttttctcaagtccaagtgaatttttttttcttcactttggaaaac
attgctttaatactgtcacccaaatcatctttttttttctattaataact
cttcttgaatgtattttttatagtcaacatacaagttgcactggaaaaat
agaataatttcaattcagtgtttcttccactgattttaaatcaaaattta
ttctgcacaacaaagaaaggtatggattttgtcctactttaactagtcag
gtttatcttttcttccagtttattttcagtaatttga
gaattcccaggatacagaattcaagaaggctaacaagctgaagggcccaa
gtgacaatgcctcaaactcacttaggagggagaagaaaccaatcatgaag
ggagggggaggaggcagctacctgggtaggaaaggctacagggagtgaaa
gagcgaacatgatccggtggggggtggggagacaggactgaagccccgag
gaccagcaggaagaatcaaaactggtaaccttgaaagtagaaagtgtgca
gaccctctagaatgtatgagagacctagaaggtaagagaatctcaggact
caaagggaggaaatgaagtgccctacagtggggagagggagactacctcc
agtagaaagtggagggatggggttgctatcccatattaaaaactctgacc
tataattgttcctttatgaaagaacttcagaaacaaaaatggagaagatc
ctgaggaaaaggagctccagtgacaggcccaaattggcatccagctcacg
gggaggccccaaggcctgacactattactgatactatgatgtgcttacca
acaggggcctataatgactgcccaacaagcagctgaaagaatcagatgca
ggtatttacactcaaccaatggacagaagctggtgaacccagtggttgaa
ttagggaaaagctggaagaaactgaggaggaggacaaccctataggatag
gccagtagtctcaactaacctggtgcccaggatctatcaagatactgaag
ccctaaaactggcaatgtacacccaactgatatgagaccccccccccccc
caacatatatacagcagtagactgctggggtctggactcaatcagagaag
aggccccttatcccttaagagactttggggatccaggaatggggaaggga
ctttgggttgtgggggacgtaaatttttttttatcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_19717571_19718550
seq2: B6Ng01-262B04.b_251_1231

seq1  GCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGTGGTTCCTCAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCTTGTACAACCACTCTGGAAATCAGTCTGGTGGTTCCTCAGAAAA  50

seq1  TTGGACATAGTACTACCCGAGGATCCGGCAATACCTCTCCTGGGCATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACATAGTACTACCCGAGGATCCGGCAATACCTCTCCTGGGCATATA  100

seq1  TCCAGAAGATGTCCCACCCGGTAAGAAGGACACATGCTCCACTATGTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAGATGTCCCACCCGGTAAGAAGGACACATGCTCCACTATGTTCA  150

seq1  TAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCC  200

seq1  TCAACACAGGAATAGATACAGAAAATGTGGTACATTTACACAATGGAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACACAGGAATAGATACAGAAAATGTGGTACATTTACACAATGGAGTA  250

seq1  CTACTCAGCTATTAAAAAGAATGAACTTATGAAATTCCTAAGCAAATGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCAGCTATTAAAAAGAATGAACTTATGAAATTCCTAAGCAAATGGA  300

seq1  TGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACAATCACAAAGGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACAATCACAAAGGAAC  350

seq1  TCACACAATATGTAAACTAGGTTTTATCAAAGAATATCTTTATTGATTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAATATGTAAACTAGGTTTTATCAAAGAATATCTTTATTGATTGC  400

seq1  AGTGAAGAACTTTTCAGGGTTTACATCTGTAGTCTCTAGCCATTTGTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGAACTTTTCAGGGTTTACATCTGTAGTCTCTAGCCATTTGTGAG  450

seq1  ACATTGTTTCAGGCTCATTTTGCTTTCAGAGTCTTAATTGAGTATTCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTTTCAGGCTCATTTTGCTTTCAGAGTCTTAATTGAGTATTCAAC  500

seq1  TAGAATGATGAAAGAAGTCTTTGACTCCTGTAGAATACGATGTCTATAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGATGAAAGAAGTCTTTGACTCCTGTAGAATACGATGTCTATAAT  550

seq1  TATTTTTATTATGAAATATTTAATAAGAATGAAAACATATCATATAATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTATTATGAAATATTTAATAAGAATGAAAACATATCATATAATGT  600

seq1  ACTATATTTGTGGGAGAATACTTTAAAATATCATCAAAAATTTCAGGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATATTTGTGGGAGAATACTTTAAAATATCATCAAAAATTTCAGGAAC  650

seq1  AAGGTATATTACATTAGTTGTGCGACTGTGCAAAAAGGCCATGAATCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATATTACATTAGTTGTGCGACTGTGCAAAAAGGCCATGAATCTGT  700

seq1  TTTCTCAAGTCCAAGTGAA-TTTTTTTTCTTCACTTTGGAAAACATTGCT  749
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTTCTCAAGTCCAAGTGAATTTTTTTTTCTTCACTTTGGAAAACATTGCT  750

seq1  TTAATACTGTCACCCAAATCATCTTTTTTTTTCTATTAATAACTCTTCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATACTGTCACCCAAATCATCTTTTTTTTTCTATTAATAACTCTTCTT  800

seq1  GAATGTA-TTTTTATAGTCAACATACAAGTTGCACTGGAAAAATAG-ATA  847
      ||||||| |||||||||||||||||||||||||||||||||||||| |||
seq2  GAATGTATTTTTTATAGTCAACATACAAGTTGCACTGGAAAAATAGAATA  850

seq1  ATTTCAATTCAGTGTTTCTT-CACTGATTTTAAATCAAAATT--ATCTGC  894
      |||||||||||||||||||| |||||||||||||||||||||   |||||
seq2  ATTTCAATTCAGTGTTTCTTCCACTGATTTTAAATCAAAATTTATTCTGC  900

seq1  ACAACAAAGAAA-GTATGGAATCTGT-CTACTTTTACTTAATTCAAGTTT  942
      |||||||||||| ||||||| | ||| ||||||| |||  | ||| ||||
seq2  ACAACAAAGAAAGGTATGGATTTTGTCCTACTTTAACT--AGTCAGGTTT  948

seq1  ATC-TTTCTTCTCAGTTTTATATTTTCATGATAATTTGA  980
      ||| ||||||| |||||   ||||||||   ||||||||
seq2  ATCTTTTCTTC-CAGTT---TATTTTCA--GTAATTTGA  981