BAC Information

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BAC

Clone NameB6Ng01-263I21
Chromosome9 (Build37)
Map Location 37,926,932 - 38,075,993
singlet/doubletdoublet
Overlap geneOlfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143
Upstream genePknox2, 1810021J13Rik, Slc37a2, LOC100042561, Ccdc15, Hepacam, Robo4, Robo3, BC024479, Esam1, Vsig2, Nrgn, Spa17, Siae, Tbrg1, Panx3, LOC666881, EG627798, Olfr160, Olfr151, Olfr874, Olfr875, Olfr876, Olfr877, Olfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889
Downstream geneOlfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933, Olfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263I21.bB6Ng01-263I21.g
ACCGA067694GA067695
length1,1441,147
definitionB6Ng01-263I21.b B6Ng01-263I21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,926,932 - 37,928,090)(38,074,852 - 38,075,993)
sequence
gaattccatgtatagccctggccaaccagtatctgaataaatgccctttg
ttaaaatgtattctctgtcagagtggtgaacacccaggatcatattttga
tgtcccaatgagatatgggcatttgctggagctgccaattcttctgacct
gtgtttagtcccttcagactcctaccttggggcctgaaatgtaaataaga
gaggctcaatgcttggggaaacaactggcaggttttccatgactagaatg
tggaatagaactaaaggtgtagttaaggacactgactgaagcacaaattt
ggttgaattaaagaaaacctggaaccagagttaattttcaagtcagaggt
actgtctggacaaagctccctgtcattgtttggtttcctgagggctccag
ccatggaaactgagaaactgggagacccatacttgaggaacccacaggaa
agctgagatcaaacttggttgttgcatatataaatgaaggtttttgtatg
gtgttctctttttaagcttttgtttgatagacatgtattttctggtgtgc
tcacaaacttgttgcagtgttgaatggattgcttgttatgttgcttattg
ttcttgaaaagattaaaacaatgttgtcaaaatcttccatttataaaatg
tggatgaactgtattctgtctatctgttgaattttttagttgtctctgat
ccttatgtttctatgtccttattgatcttttccagttaaggtaaccatag
aaaacagaacctcaatgatgtcatctctcagagtttcctgctctctctgc
tttctgctcctgtacgctgttcactactgcagctgccccacccagagtct
cttttctctgagcattcccttttctctcctatctctgattactggctctg
gtcattggattcagttttgtagaattcagtgtcttgtaggtatagatact
attaaaatgttgtttatactgtgtacattattgaaaagctggttctggga
ttgggatatagatagcttcctcccacccccactattcaaacatacgtttt
aaaagtttccttcataattaatgtctgtgttcagtgggcacttgactttg
gcagggagagaaacaagagcacagggaagaacctgaatgctgta
gaattcctatttcctctctcctcttccatcttgtgtataacacttcagaa
agatgctggggaaccttaatttcctcaaataaaatatctttcctttcttc
tagtgtttactaacatttaaggctgaaaagtgcagtgcatgcactttttt
cagaatttatgatttatatagcagtgggaatgaagacaaaaatgtcaaaa
taaagattatccagtgctcaccttgattcatctggagccttccctgacat
cggagttcatggtatcttcctgttcgctgtgcacagagggcccaagttgt
taataatgaagcaggtaattgcaatcagtgcagaaaatgtacctcacttg
ctacaagaagttcccttgggaaaatgtcatggttactctttgacaaagat
tcttttactcatacaaaaaaagaaaatagttttcttatttgaatcttcaa
agcctcaaggtcaagatttttgagaaaatttattagaattatagaaaaga
attctcttctttaagatactttccatgttggatgagtcccttgagggtta
aattgttgctattgtaccagagaactaacatcagtcctttagagattcaa
cattctactcaatttataattttccagcaggagtatctggtccccagagt
agaagtgtgagttggccagtttgttattctcttcattaagttctgcaaca
gctctgcaagaggaaatgtccagggacacactcactttccatttgtagtt
ttcatatgattacattaataaactgttgaccaaggattaatattgtacaa
aaatatttgaagaaaggggataaaagattttaaacaggctctcatgtttt
tcttaattaacattaaagcttttcattcctaggcttgtcattgtttgttt
acatgtgaatattcttatgaataaatgtaaaataaattcataaatatggg
cttacattttgaactactagtaaagttcatgggttatcatacagaaattt
ctgggtacaatttttgcaggaaaaataacaaattcaatgcacaatataaa
aatattattcattttgagaaaaatttatacagtatattcagaaagttact
ttatggaaaattactagtatgtgttagtcctcttaactgtgacattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_37926932_37928090
seq2: B6Ng01-263I21.b_49_1192

seq1  GAATTCCATGTATAGCCCTGGCCAACCAGTATCTGAATAAATGCCCTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGTATAGCCCTGGCCAACCAGTATCTGAATAAATGCCCTTTG  50

seq1  TTAAAATGTATTCTCTGTCAGAGTGGTGAACACCCAGGATCATATTTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGTATTCTCTGTCAGAGTGGTGAACACCCAGGATCATATTTTGA  100

seq1  TGTCCCAATGAGATATGGGCATTTGCTGGAGCTGCCAATTCTTCTGACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCAATGAGATATGGGCATTTGCTGGAGCTGCCAATTCTTCTGACCT  150

seq1  GTGTTTAGTCCCTTCAGACTCCTACCTTGGGGCCTGAAATGTAAATAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTAGTCCCTTCAGACTCCTACCTTGGGGCCTGAAATGTAAATAAGA  200

seq1  GAGGCTCAATGCTTGGGGAAACAACTGGCAGGTTTTCCATGACTAGAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCAATGCTTGGGGAAACAACTGGCAGGTTTTCCATGACTAGAATG  250

seq1  TGGAATAGAACTAAAGGTGTAGTTAAGGACACTGACTGAAGCACAAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATAGAACTAAAGGTGTAGTTAAGGACACTGACTGAAGCACAAATTT  300

seq1  GGTTGAATTAAAGAAAACCTGGAACCAGAGTTAATTTTCAAGTCAGAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAATTAAAGAAAACCTGGAACCAGAGTTAATTTTCAAGTCAGAGGT  350

seq1  ACTGTCTGGACAAAGCTCCCTGTCATTGTTTGGTTTCCTGAGGGCTCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTGGACAAAGCTCCCTGTCATTGTTTGGTTTCCTGAGGGCTCCAG  400

seq1  CCATGGAAACTGAGAAACTGGGAGACCCATACTTGAGGAACCCACAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAAACTGAGAAACTGGGAGACCCATACTTGAGGAACCCACAGGAA  450

seq1  AGCTGAGATCAAACTTGGTTGTTGCATATATAAATGAAGGTTTTTGTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGATCAAACTTGGTTGTTGCATATATAAATGAAGGTTTTTGTATG  500

seq1  GTGTTCTCTTTTTAAGCTTTTGTTTGATAGACATGTATTTTCTGGTGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTCTTTTTAAGCTTTTGTTTGATAGACATGTATTTTCTGGTGTGC  550

seq1  TCACAAACTTGTTGCAGTGTTGAATGGATTGCTTGTTATGTTGCTTATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAACTTGTTGCAGTGTTGAATGGATTGCTTGTTATGTTGCTTATTG  600

seq1  TTCTTGAAAAGATTAAAACAATGTTGTCAAAATCTTCCATTTATAAAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAAAAGATTAAAACAATGTTGTCAAAATCTTCCATTTATAAAATG  650

seq1  TGGATGAACTGTATTCTGTCTATCTGTTGAATTTTTTAGTTGTCTCTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGAACTGTATTCTGTCTATCTGTTGAATTTTTTAGTTGTCTCTGAT  700

seq1  CCTTATGTTTCTATGTCCTTATTGATCTTTTCCAGTTAAGGTAACCATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATGTTTCTATGTCCTTATTGATCTTTTCCAGTTAAGGTAACCATAG  750

seq1  AAAACAGAACCTCAATGATGTCATCTCTCAGAGTTTCCTGCTCTCTCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAGAACCTCAATGATGTCATCTCTCAGAGTTTCCTGCTCTCTCTGC  800

seq1  TTTCTGCTCCTGTACGCTGTTCACTACTGCAGCTGCCCCACCCAGAGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTCCTGTACGCTGTTCACTACTGCAGCTGCCCCACCCAGAGTCT  850

seq1  CTTTTCTCTGAGCATTCCCTTTTCTCTCCTATCTCTGATTACTGGCTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTCTGAGCATTCCCTTTTCTCTCCTATCTCTGATTACTGGCTCTG  900

seq1  GTCATTGGATTCAGTTTTGTAGAAATTCAGGTGTCTTGTAGGTATAGATA  950
      |||||||||||||||||||||| |||||| ||||||||||||||||||||
seq2  GTCATTGGATTCAGTTTTGTAG-AATTCA-GTGTCTTGTAGGTATAGATA  948

seq1  CTATTAAAATGTTGTTTTATACTGTTGTACATTATTGAAAAGCTGGTTCT  1000
      |||||||||||||| ||||||||| |||||||||||||||||||||||||
seq2  CTATTAAAATGTTG-TTTATACTG-TGTACATTATTGAAAAGCTGGTTCT  996

seq1  GGGATT-GGATATAGATAGCTTCCTCCCACCCCCACCTAATTCCAAACAT  1049
      |||||| |||||||||||||||||||||||||||| |||  | |||||||
seq2  GGGATTGGGATATAGATAGCTTCCTCCCACCCCCA-CTA--TTCAAACAT  1043

seq1  ACGTTTTAAAAAGTTTCCTCCATAATT-ATGTCCTGTGTCAAGTGGGGCA  1098
      ||||||| ||||||||||| ||||||| |||| ||||||  ||| |||||
seq2  ACGTTTT-AAAAGTTTCCTTCATAATTAATGT-CTGTGTTCAGT-GGGCA  1090

seq1  CTTGACTTTGGGCCAAGGAGAGAAAAACAAAAGAGCACAGGAGAAGACAC  1148
      |||||||||||  || ||||||||    | ||||||||||| |||||  |
seq2  CTTGACTTTGG--CAGGGAGAGAA----ACAAGAGCACAGG-GAAGAACC  1133

seq1  TGTATGCTGTA  1159
      || ||||||||
seq2  TGAATGCTGTA  1144

seq1: chr9_38074852_38075993
seq2: B6Ng01-263I21.g_67_1213 (reverse)

seq1  GAATGTAAACAGTGTAAGAGGACTAACACATACTAGTATATTTTCAT-AA  49
      ||||||  ||||| ||||||||||||||||||||||||  ||| ||| ||
seq2  GAATGT-CACAGT-TAAGAGGACTAACACATACTAGTAATTTTCCATAAA  48

seq1  GTAACTTTCTG-ATATACTGTATAAA-TTTTCTCAAAATGAATAATA-TT  96
      ||||||||||| |||||||||||||| |||||||||||||||||||| ||
seq2  GTAACTTTCTGAATATACTGTATAAATTTTTCTCAAAATGAATAATATTT  98

seq1  TTATATTGTGCATTTGAATTTGTTATTTT--CTGC-AAAATTGTACCCAG  143
      |||||||||||| ||||||||||||||||  |||| ||||||||||||||
seq2  TTATATTGTGCA-TTGAATTTGTTATTTTTCCTGCAAAAATTGTACCCAG  147

seq1  AAATTTCTGTATGATAA-CCATGAACTTTACTAGTAGTTCAAAATGTAAG  192
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAATTTCTGTATGATAACCCATGAACTTTACTAGTAGTTCAAAATGTAAG  197

seq1  CCCATATTTATGAATTTATTTTACATTTATTCATAAGAATATTCACATGT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATTTATGAATTTATTTTACATTTATTCATAAGAATATTCACATGT  247

seq1  AAACAAACAATGACAAGCCTAGGAATGAAAAGCTTTAATGTTAATTAAGA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAATGACAAGCCTAGGAATGAAAAGCTTTAATGTTAATTAAGA  297

seq1  AAAACATGAGAGCCTGTTTAAAATCTTTTATCCCCTTTCTTCAAATATTT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATGAGAGCCTGTTTAAAATCTTTTATCCCCTTTCTTCAAATATTT  347

seq1  TTGTACAATATTAATCCTTGGTCAACAGTTTATTAATGTAATCATATGAA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACAATATTAATCCTTGGTCAACAGTTTATTAATGTAATCATATGAA  397

seq1  AACTACAAATGGAAAGTGAGTGTGTCCCTGGACATTTCCTCTTGCAGAGC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACAAATGGAAAGTGAGTGTGTCCCTGGACATTTCCTCTTGCAGAGC  447

seq1  TGTTGCAGAACTTAATGAAGAGAATAACAAACTGGCCAACTCACACTTCT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCAGAACTTAATGAAGAGAATAACAAACTGGCCAACTCACACTTCT  497

seq1  ACTCTGGGGACCAGATACTCCTGCTGGAAAATTATAAATTGAGTAGAATG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGGGGACCAGATACTCCTGCTGGAAAATTATAAATTGAGTAGAATG  547

seq1  TTGAATCTCTAAAGGACTGATGTTAGTTCTCTGGTACAATAGCAACAATT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCTCTAAAGGACTGATGTTAGTTCTCTGGTACAATAGCAACAATT  597

seq1  TAACCCTCAAGGGACTCATCCAACATGGAAAGTATCTTAAAGAAGAGAAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCTCAAGGGACTCATCCAACATGGAAAGTATCTTAAAGAAGAGAAT  647

seq1  TCTTTTCTATAATTCTAATAAATTTTCTCAAAAATCTTGACCTTGAGGCT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTATAATTCTAATAAATTTTCTCAAAAATCTTGACCTTGAGGCT  697

seq1  TTGAAGATTCAAATAAGAAAACTATTTTCTTTTTTTGTATGAGTAAAAGA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGATTCAAATAAGAAAACTATTTTCTTTTTTTGTATGAGTAAAAGA  747

seq1  ATCTTTGTCAAAGAGTAACCATGACATTTTCCCAAGGGAACTTCTTGTAG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGTCAAAGAGTAACCATGACATTTTCCCAAGGGAACTTCTTGTAG  797

seq1  CAAGTGAGGTACATTTTCTGCACTGATTGCAATTACCTGCTTCATTATTA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGAGGTACATTTTCTGCACTGATTGCAATTACCTGCTTCATTATTA  847

seq1  ACAACTTGGGCCCTCTGTGCACAGCGAACAGGAAGATACCATGAACTCCG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTGGGCCCTCTGTGCACAGCGAACAGGAAGATACCATGAACTCCG  897

seq1  ATGTCAGGGAAGGCTCCAGATGAATCAAGGTGAGCACTGGATAATCTTTA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAGGGAAGGCTCCAGATGAATCAAGGTGAGCACTGGATAATCTTTA  947

seq1  TTTTGACATTTTTGTCTTCATTCCCACTGCTATATAAATCATAAATTCTG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGACATTTTTGTCTTCATTCCCACTGCTATATAAATCATAAATTCTG  997

seq1  AAAAAAGTGCATGCACTGCACTTTTCAGCCTTAAATGTTAGTAAACACTA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTGCATGCACTGCACTTTTCAGCCTTAAATGTTAGTAAACACTA  1047

seq1  GAAGAAAGGAAAGATATTTTATTTGAGGAAATTAAGGTTCCCCAGCATCT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGGAAAGATATTTTATTTGAGGAAATTAAGGTTCCCCAGCATCT  1097

seq1  TTCTGAAGTGTTATACACAAGATGGAAGAGGAGAGAGGAAATAGGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGTGTTATACACAAGATGGAAGAGGAGAGAGGAAATAGGAATTC  1147