MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-263P01
Chromosome	9 (Build37)
Map Location	89,648,778 - 89,769,840
singlet/doublet	doublet
Overlap gene	none
Upstream gene	LOC100039674, EG666731, LOC100039741, Bcl2a1a, LOC100039689, EG666747, LOC100039714, 4930579C12Rik, Bcl2a1b, Mthfs, AF529169, Tmed3, B230218L05Rik
Downstream gene	Rasgrf1, Ctsh, Morf4l1, LOC621414, Adamts7, Tbc1d2b, LOC100039777, LOC100039925
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039674 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039674
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein

name	EG666731 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666731 MGI:3647365
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 96 ESTs, 1 Protein

name	LOC100039741 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039741
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein

name	Bcl2a1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12044 MGI:102687
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039689 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039689
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs

name	EG666747 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666747 MGI:3648996
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 98 ESTs, 1 Protein

name	LOC100039714 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039714
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	4930579C12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319213 MGI:2441687
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bcl2a1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12045 MGI:1278326
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mthfs (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107885 MGI:1340032
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AF529169 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209743 MGI:2667167
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmed3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66111 MGI:1913361
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	B230218L05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330998 MGI:2685617
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rasgrf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19417 MGI:99694
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Ctsh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13036 MGI:107285
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Morf4l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21761 MGI:1096551
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC621414 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:621414
definition	note : transmembrane protein 41B pseudogene pseudo : _no_value

name	Adamts7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108153 MGI:1347346
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tbc1d2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67016 MGI:1914266
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039777 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039777
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC100039925 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039925
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100039674 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260133 GeneID:100039674
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein product : hypothetical protein LOC100039674 transcript_id : XM_001473239.1

name	EG666731 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386300 GeneID:666731 MGI:3647365
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 96 ESTs, 1 Protein product : predicted gene, EG666731, transcript variant 2 transcript_id : XM_001000507.1

name	LOC100039741 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260143 GeneID:100039741
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 1 Protein product : hypothetical protein LOC100039741 transcript_id : XM_001473330.1

name	Bcl2a1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130280 GeneID:12044 MGI:102687
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : B-cell leukemia/lymphoma 2 related protein A1a transcript_id : NM_009742.3

name	LOC100039689 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260135 GeneID:100039689
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs product : similar to Mthfs protein transcript_id : XM_001473342.1

name	EG666747 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260145 GeneID:666747 MGI:3648996
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 98 ESTs, 1 Protein product : predicted gene, EG666747, transcript variant 2 transcript_id : XM_001000540.2

name	LOC100039714 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260139 GeneID:100039714
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100039714 transcript_id : XM_001473372.1

name	4930579C12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802728 GeneID:319213 MGI:2441687
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930579C12 gene transcript_id : NM_175672.3

name	Bcl2a1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6671625 GeneID:12045 MGI:1278326
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : B-cell leukemia/lymphoma 2 related protein A1b transcript_id : NM_007534.1

name	Mthfs (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363048 GeneID:107885 MGI:1340032
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5, 10-methenyltetrahydrofolate synthetase transcript_id : NM_026829.2

name	AF529169 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130174 GeneID:209743 MGI:2667167
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence AF529169 transcript_id : NM_153509.2

name	Tmed3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13384723 GeneID:66111 MGI:1913361
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane emp24 domain containing 3 transcript_id : NM_025360.1

name	B230218L05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387048 GeneID:330998 MGI:2685617
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA B230218L05 gene transcript_id : NM_207260.2

name	Rasgrf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89111132 GeneID:19417 MGI:99694
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAS protein-specific guanine nucleotide-releasing factor 1 transcript_id : NM_011245.2

name	Rasgrf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89111130 GeneID:19417 MGI:99694
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAS protein-specific guanine nucleotide-releasing factor 1 transcript_id : NM_001039655.1

name	Ctsh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7106278 GeneID:13036 MGI:107285
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cathepsin H transcript_id : NM_007801.1

name	Morf4l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85540469 GeneID:21761 MGI:1096551
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mortality factor 4 like 1 transcript_id : NM_024431.2

name	Morf4l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85540472 GeneID:21761 MGI:1096551
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mortality factor 4 like 1 transcript_id : NM_001039147.1

name	Adamts7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778948 GeneID:108153 MGI:1347346
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7 transcript_id : NM_001003911.2

name	Tbc1d2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:57165376 GeneID:67016 MGI:1914266
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TBC1 domain family, member 2B transcript_id : NM_194334.2

name	LOC100039777 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260146 GeneID:100039777
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Ubtf protein transcript_id : XM_001473487.1

name	LOC100039674 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260134 GeneID:100039674
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473289.1

name	EG666731 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94386301 GeneID:666731 MGI:3647365
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001000507.1

name	LOC100039741 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260144 GeneID:100039741
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473380.1

name	Bcl2a1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11024684 CCDS:CCDS23391.1 GeneID:12044 MGI:102687
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA] codon_start : 1 product : B-cell leukemia/lymphoma 2 related protein A1a protein_id : NP_033872.1

name	LOC100039689 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260136 GeneID:100039689
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473392.1

name	EG666747 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94386305 GeneID:666747 MGI:3648996
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001000540.1

name	LOC100039714 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260140 GeneID:100039714
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473422.1

name	4930579C12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28316766 GeneID:319213 MGI:2441687
definition	codon_start : 1 product : hypothetical protein LOC319213 protein_id : NP_783603.1

name	Bcl2a1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671626 CCDS:CCDS23393.1 GeneID:12045 MGI:1278326
definition	codon_start : 1 exception : mismatches in translation function : hematopoietic-specific early-response note : anti-apoptotic protein A1-b product : B-cell leukemia/lymphoma 2 related protein A1b protein_id : NP_031560.1

name	Mthfs (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18093092 CCDS:CCDS23394.1 GeneID:107885 MGI:1340032
definition	GO_function : GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0005542 - folic acid binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : 5, 10-methenyltetrahydrofolate synthetase protein_id : NP_081105.1

name	AF529169 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23943816 CCDS:CCDS23395.1 GeneID:209743 MGI:2667167
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC209743 protein_id : NP_705729.1

name	Tmed3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384724 CCDS:CCDS23396.1 GeneID:66111 MGI:1913361
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : integral type I protein protein_id : NP_079636.1

name	B230218L05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402267 CCDS:CCDS23397.1 GeneID:330998 MGI:2685617
definition	codon_start : 1 product : hypothetical protein LOC330998 protein_id : NP_997143.1

name	Rasgrf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755288 GeneID:19417 MGI:99694
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS]; GO:0019717 - synaptosome [Evidence ISS] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0008283 - cell proliferation [Evidence IMP]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007616 - long-term memory [Evidence ISS]; GO:0048168 - regulation of neuronal synaptic plasticity [Evidence IMP]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA]; GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; GRF beta; Ras guanine release factor beta; guanine nucleotide releasing factor 1 product : RAS protein-specific guanine nucleotide-releasing factor 1 isoform 1 protein_id : NP_035375.1

name	Rasgrf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89111131 GeneID:19417 MGI:99694
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS]; GO:0019717 - synaptosome [Evidence ISS] GO_function : GO:0005085 - guanyl-nucleotide exchange factor activity [Evidence IEA]; GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0008283 - cell proliferation [Evidence IMP]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007616 - long-term memory [Evidence ISS]; GO:0048168 - regulation of neuronal synaptic plasticity [Evidence IMP]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA]; GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; GRF beta; Ras guanine release factor beta; guanine nucleotide releasing factor 1 product : RAS protein-specific guanine nucleotide-releasing factor 1 isoform 2 protein_id : NP_001034744.1

name	Ctsh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106279 CCDS:CCDS23399.1 GeneID:13036 MGI:107285
definition	GO_component : GO:0005764 - lysosome [Evidence IEA] GO_function : GO:0004215 - cathepsin H activity [Evidence IEA]; GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Cat H product : cathepsin H protein_id : NP_031827.1

name	Morf4l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13277348 GeneID:21761 MGI:1096551
definition	GO_component : GO:0016585 - chromatin remodeling complex [Evidence TAS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008283 - cell proliferation [Evidence IMP]; GO:0016568 - chromatin modification [Evidence IEA]; GO:0006338 - chromatin remodeling [Evidence TAS]; GO:0001558 - regulation of cell growth [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; testis expressed gene 189 product : mortality factor 4 like 1 isoform b protein_id : NP_077751.1

name	Morf4l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85540473 CCDS:CCDS23400.1 GeneID:21761 MGI:1096551
definition	GO_component : GO:0016585 - chromatin remodeling complex [Evidence TAS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008283 - cell proliferation [Evidence IMP]; GO:0016568 - chromatin modification [Evidence IEA]; GO:0006338 - chromatin remodeling [Evidence TAS]; GO:0001558 - regulation of cell growth [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; testis expressed gene 189 product : mortality factor 4 like 1 isoform a protein_id : NP_001034236.1

name	Adamts7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133778949 GeneID:108153 MGI:1347346
definition	GO_component : GO:0009986 - cell surface [Evidence IDA]; GO:0031012 - extracellular matrix [Evidence IEA] GO_function : GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IDA] GO_process : GO:0006508 - proteolysis [Evidence IDA] codon_start : 1 note : metalloprotease product : a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 7 protein_id : NP_001003911.2

name	Tbc1d2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:57165377 CCDS:CCDS23401.1 GeneID:67016 MGI:1914266
definition	codon_start : 1 product : TBC1 domain family, member 2B protein_id : NP_919315.2

name	LOC100039777 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260147 GeneID:100039777
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473537.1

name	LOC100039925 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039925
definition	number : 1 pseudo : _no_value

clone name	MSMg01-465E17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-113C20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-193F01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-525G24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-194I15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-339J14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-160K17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-260F10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-067I07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-165L09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-165M08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-348O13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-296I14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-103M07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-534E09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-412M19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-062N23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-416L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297E03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-413B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-268F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232I11
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-263P01.b	B6Ng01-263P01.g
ACC	GA067976	GA067977
length	1,121	855
definition	B6Ng01-263P01.b	B6Ng01-263P01.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(89,648,778 - 89,649,889)	(89,768,991 - 89,769,840)
sequence	gaattccttagtggctatatcactttgcactccaacagagaatatgtgtt gcttttccccggtgccactccaccattaataatcatctgtgttaataacc ttcattattctgcatgaaataagataaaatcttaaagttgttttaattat catttccctgatggctaatggtgttggacattgtaaacatatttctcaat tattagtattttatcctttgagaacacttcatttagttctatgccataat tttaattggattgttctttttttactttgttatagaaaaaaagagcttgt taaataaataaagaacatcatacacaaaaattaaccagctccaaagaccg tgcaatataatgaacttacaagcaattacaattgacactccaaaatggga tctgtgaagcttgtgctatatttatgcatttatccacaccaaaacaaaac aaaacaaaatctatgacagaattagaactagaaaaacgtatgcctgcatt cagttcttctgtagtgcctcatatttagctttccttgttcccttttgttc gctgtatactgtacccaaaaaagtacagtatatataagtacagtatatat atataatctagccatatatatatatggctagattccacacacaagtgaga acgtgtgccttgttctttctgagatggtgtgacttctcttaatatacatc tgagctcccctatttctctgtaaaattttaacttcacttacctttagaac tgagtaatatgtgtgtgtgtgcacgcgcgtgcgtgtgtgtgtgtgtgtgt gtgtgcgcgcgcgcacgcgcatgtgattttaattattcatttatctattg atggacaactaggttgattccaatttcctttctatagtgaataaacaata cagcaataacatcgggtacaacttacctctataataaggatgtaaaatac cagagtcatatgatagttctattttttaattttggagaaatcctctaaac ttaatttttacaatgggctttattaaccttgcatccccataaacaattct tctcctctttctctccatcatctcaacccttggcgaatcaactgggggtg aaatctaatttcaagtagttt	gaattctttacctgcttgtcctcacactcataggcaagacctttccttca ctggtattggagtgtacttctttgggattctgtcaaacccccaaactagc tgcgacgtccagccttaaggtccgaaaaactactggattttgggattttt ccatctgaagacagccgttgttagaatagtcagatactaacctgtaaggc actctaatacattccattttttgtatagagccattctatcaatttgttta tctagagaggcctgactcatacagacagggagggcggcaagggctgcaga gatgagtcaccggcatgaccaatagctagaactcatagttctgagaagca gcgtgggggaagtggtttgctctccctcaccatggctaccggtgacactt aagaaaggcagcttgtttgtcctggacacttggattctatttgactcaag gtcctgtttgcaggcgtggaggctcctctggggggatgcgagggcgggag cccctgaactcagcaatggctcctcacacccatccacaactcaggcaaaa gatcatcacagtcactgaactaccataggagagggatcctcttagcatct gagagagtgtgtcttgtttagaagacagccttaggagacacagtgacatg caaggaagggtattaatagacagggggctatggtgggagattaagaggcc acagggaaaattcggttgtgctttacacctgcttaggggagggcagcaaa ctggggggatgaatgtgtgatctcttgtttttccccaggggacttaactc tgaggatctttgccctgtactcagtggtgagtcattatggaaggcccaga cactc
quality values	Open. Hide. 58 33 52 35 58 58 58 58 62 62 62 62 62 49 62 54 56 62 62 49 38 47 62 62 62 62 62 47 53 62 56 56 44 19 32 29 20 34 62 51 43 62 47 62 59 59 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 59 62 62 59 62 62 59 59 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 53 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 53 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 54 58 58 58 58 58 58 58 58 58 58 54 54 58 58 54 58 54 58 54 58 58 58 58 58 54 58 58 52 58 58 58 51 58 54 58 54 58 58 58 58 58 52 58 58 58 54 47 58 54 42 46 54 54 58 52 54 41 58 58 52 54 58 53 58 50 47 53 51 58 54 53 58 58 49 42 51 50 30 41 52 58 58 53 51 49 54 35 46 37 54 58 42 58 53 58 39 41 51 48 51 45 53 52 46 46 50 50 52 50 48 50 39 58 51 51 54 58 19 58 51 51 38 36 58 41 52 49 58 43 50 52 53 52 51 39 28 58 58 52 50 58 58 47 39 50 52 54 52 49 34 51 49 44 32 54 44 34 33 36 36 41 54 40 32 47 50 54 39 39 37 46 42 45 40 51 54 54 54 54 54 54 54 54 54 49 52 37 39 31 49 24 54 29 46 43 54 38 52 53 37 34 54 51 54 47 53 52 51 40 51 44 44 37 47 54 53 53 53 34 47 25 46 25 51 23 33 15 42 13 19 24 53 24 22 18 31 34 34 32 35 33 33 28 18 21 33 18 31 9 8 46 51 13 13 41 34 41 30 27 9 24 22 40 32 29 36 43 34 18 26 16 35 31 18 22 15 35 26 24 31 31 26 29 30 11 5 8 11 46 20 34 18 44 46 33 19 16 27 7 9 31 31 42 33 30 13 27 46 21 31 31 31 30 31 32 23 26 39 18 27 32 33 27 28 24 33 31 30 44 29 8 18 20 13 34 15 15 8 17 26 31 27 31 32 33 30 27 22 31 29 18 8 8 29 23 21 16 20 36 38 24 21 31 27 27 10 11 29 14 25 29 10 14 16 19 31 32 17 37 22 18 14 38 30 17 13 36 43 17 31 11 20 5 12 12 31 34 21 11 26 16 32 37 23 6 5 12 5 20 27 22 36 23 32 15 32 11 7 28 30 36 31 29 12 22 18 34 13 33 39 16 19 11 5 6 11 25 13 14 16 9 7 26 8 27 10 9 28 25 40 40 21 7 11 20 47 22 19 13 7 27 8 10 7 6 18 8 10 8 5 12 13 28 7 9 6 6 4 5 14 8 8 14 11 7 5 6 4 4 7 7 7 7 6 15 10 6 3 3 20 11 3 2 3 10 8 5 6 17 25 23 13 8 12 11 17 10 5 13 3 3 4 6 18 15 10 14 11 5 3 12 5 20 28 19	Open. Hide. 62 47 51 47 62 62 62 62 59 62 34 41 28 32 25 28 34 49 34 43 43 43 59 51 62 49 62 62 59 59 59 62 62 62 59 62 62 62 59 59 62 62 62 54 62 62 62 62 59 56 59 59 59 62 51 51 46 50 38 32 42 48 43 49 56 59 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 59 59 62 62 62 62 62 62 54 62 62 62 62 62 59 59 49 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 54 49 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 59 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 59 62 62 62 62 62 62 59 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 43 62 59 50 59 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 39 62 62 56 54 62 62 62 62 62 62 62 54 56 62 62 62 62 62 47 47 56 56 56 56 42 29 51 56 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 54 51 62 62 54 56 62 56 62 62 62 54 62 38 62 62 56 62 62 62 56 62 56 62 43 62 62 62 62 62 56 62 62 56 62 62 62 62 52 62 52 62 62 62 52 62 52 42 62 62 52 62 28 62 62 38 42 62 54 62 62 62 48 47 35 43 43 52 52 58 58 58 52 58 48 58 37 54 58 54 58 50 54 50 52 58 45 44 52 53 29 54 54 39 58 32 52 35 28 45 52 52 50 37 52 48 31 52 39 47 52 35 35 52 46 26 47 34 54 37 29 39 52 42 58 58 28 18 58 25 21 41 39 54 50 50 53 52 33 53 42 39 46 54 47 58 42 47 50 32 38 29 44 40 43 41 39 45 40 36 14 25 40 42 27 49 21 51 21 22 22 52 32 31 39 30 30 49 48 35 40 40 50 9 7 6 40 49 18 46 50 31 50 43 17 22 40 53 39 35 37 35 33 35 42 50 58 44 50 34 11 58 20 19 41 39 21 17 31 16 16 36 39 21 40 31 27 29 17 18 32 51 10 25 45 39 53 39 31 41 35 29 38 30 16 39 18 9 52 40 33 13 12 21 27 15 21 16 37 49 17 27 31 35 53 14 53 39 33 20 22 24 14 6 24 11 13 40 40 23 30 26 10 31 17 7 14 6 11 24 13 13 9 10 14 10 22 9 18 14 16 9 12 10 16 7 10 27 32 23 37 12 33 32 16 22 41 8 18 25 13 7 11 19 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_89648778_89649889
seq2: B6Ng01-263P01.b_45_1165

seq1  GAATTCCTTAGTGGCTATATCACTTTGCACTCCAACAGAGAATATGTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAGTGGCTATATCACTTTGCACTCCAACAGAGAATATGTGTT  50

seq1  GCTTTTCCCCGGTGCCACTCCACCATTAATAATCATCTGTGTTAATAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCCCCGGTGCCACTCCACCATTAATAATCATCTGTGTTAATAACC  100

seq1  TTCATTATTCTGCATGAAATAAGATAAAATCTTAAAGTTGTTTTAATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTATTCTGCATGAAATAAGATAAAATCTTAAAGTTGTTTTAATTAT  150

seq1  CATTTCCCTGATGGCTAATGGTGTTGGACATTGTAAACATATTTCTCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCCTGATGGCTAATGGTGTTGGACATTGTAAACATATTTCTCAAT  200

seq1  TATTAGTATTTTATCCTTTGAGAACACTTCATTTAGTTCTATGCCATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTATTTTATCCTTTGAGAACACTTCATTTAGTTCTATGCCATAAT  250

seq1  TTTAATTGGATTGTTCTTTTTTTACTTTGTTATAGAAAAAAAGAGCTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTGGATTGTTCTTTTTTTACTTTGTTATAGAAAAAAAGAGCTTGT  300

seq1  TAAATAAATAAAGAACATCATACACAAAAATTAACCAGCTCCAAAGACCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATAAAGAACATCATACACAAAAATTAACCAGCTCCAAAGACCG  350

seq1  TGCAATATAATGAACTTACAAGCAATTACAATTGACACTCCAAAATGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATATAATGAACTTACAAGCAATTACAATTGACACTCCAAAATGGGA  400

seq1  TCTGTGAAGCTTGTGCTATATTTATGCATTTATCCACACCAAAACAAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAAGCTTGTGCTATATTTATGCATTTATCCACACCAAAACAAAAC  450

seq1  AAAACAAAATCTATGACAGAATTAGAACTAGAAAAACGTATGCCTGCATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAATCTATGACAGAATTAGAACTAGAAAAACGTATGCCTGCATT  500

seq1  CAGTTCTTCTGTAGTGCCTCATATTTAGCTTTCCTTGTTCCCTTTTGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTTCTGTAGTGCCTCATATTTAGCTTTCCTTGTTCCCTTTTGTTC  550

seq1  GCTGTATACTGTACCCAAAAAAGTACAGTATATATAAGTACAGTATATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATACTGTACCCAAAAAAGTACAGTATATATAAGTACAGTATATAT  600

seq1  ATATAATCTAGCCATATATATATATGGCTAGATTCCACACACAAGTGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATCTAGCCATATATATATATGGCTAGATTCCACACACAAGTGAGA  650

seq1  ACGTGTGCCTTGTTCTTTCTGAGATGGTGTGACTTCTCTTAATATACATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTGCCTTGTTCTTTCTGAGATGGTGTGACTTCTCTTAATATACATC  700

seq1  TGAGCTCCCCTATTTCTCTGTAAAATTTTAACTTCACTTACCTTTAGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCCCCTATTTCTCTGTAAAATTTTAACTTCACTTACCTTTAGAAC  750

seq1  TGAGTAATATGTGTGTGTGTGCACGCGCGTGCGTGTGTGTGTGTGTGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTAATATGTGTGTGTGTGCACGCGCGTGCGTGTGTGTGTGTGTGTGT  800

seq1  GTGTGCGCGCGCGCACGCGCATGTGATTTTAATTATTCATTTATCTATTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCGCGCGCGCACGCGCATGTGATTTTAATTATTCATTTATCTATTG  850

seq1  ATGGACAACTAGGTTGATTCCAA-TTCCTTTCTATAGTGAATAAACAATA  899
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATGGACAACTAGGTTGATTCCAATTTCCTTTCTATAGTGAATAAACAATA  900

seq1  CAGCAATAACATCGGGTACAAC-TACCTCTATAATAA-GATGTAAAATAC  947
      |||||||||||||||||||||| |||||||||||||| ||||||||||||
seq2  CAGCAATAACATCGGGTACAACTTACCTCTATAATAAGGATGTAAAATAC  950

seq1  CAGAGTCATATGATAGTTCTA-TTTTTAATTTTTGAGAAAT-CTCTAAAC  995
      ||||||||||||||||||||| ||||||||||| ||||||| ||||||||
seq2  CAGAGTCATATGATAGTTCTATTTTTTAATTTTGGAGAAATCCTCTAAAC  1000

seq1  TT-ATTTTTACAAT-GGCTATATTAA-CTTGCATCCCCATAAACA----T  1038
      || ||||||||||| |||| |||||| ||||||||||||||||||    |
seq2  TTAATTTTTACAATGGGCTTTATTAACCTTGCATCCCCATAAACAATTCT  1050

seq1  TCTCTCTCTTTCTCTCCATCATCTTCAACACTTGTCAAATTAAACTGGGG  1088
      |||| |||||||||||||||||| ||||| |||| | ||| ||   ||||
seq2  TCTC-CTCTTTCTCTCCATCATC-TCAACCCTTGGCGAATCAACTGGGGG  1098

seq1  TGAAATCATATTTCAAAGTAGTTT  1112
      |||||||  ||||| |||||||||
seq2  TGAAATCTAATTTC-AAGTAGTTT  1121

seq1: chr9_89768991_89769840
seq2: B6Ng01-263P01.g_65_919 (reverse)

seq1  GAGTGTCTGGGCCTTCCAT-ATGACTCA-CACTGAGTACA-GGCAAAGAT  47
      ||||||||||||||||||| |||||||| ||||||||||| |||||||||
seq2  GAGTGTCTGGGCCTTCCATAATGACTCACCACTGAGTACAGGGCAAAGAT  50

seq1  CCTCAGAGTTAAGT-CCCTTGGGAAAAACAAGAGATCACACATTCAT-CC  95
      |||||||||||||| |||| ||||||||||||||||||||||||||| ||
seq2  CCTCAGAGTTAAGTCCCCTGGGGAAAAACAAGAGATCACACATTCATCCC  100

seq1  CCCAGTTTGCTGCCCTCCCCTAAGCAGGTGTAAAGCACAACCGAATTTTC  145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTTTGCTGCCCTCCCCTAAGCAGGTGTAAAGCACAACCGAATTTTC  150

seq1  CCTGTGGCCTCTTAATCTCCCACCATAGCCCCCTGTCTATTAATACCCTT  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGGCCTCTTAATCTCCCACCATAGCCCCCTGTCTATTAATACCCTT  200

seq1  CCTTGCATGTCACTGTGTCTCCTAAGGCTGTCTTCTAAACAAGACACACT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCATGTCACTGTGTCTCCTAAGGCTGTCTTCTAAACAAGACACACT  250

seq1  CTCTCAGATGCTAAGAGGATCCCTCTCCTATGGTAGTTCAGTGACTGTGA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGATGCTAAGAGGATCCCTCTCCTATGGTAGTTCAGTGACTGTGA  300

seq1  TGATCTTTTGCCTGAGTTGTGGATGGGTGTGAGGAGCCATTGCTGAGTTC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTTTGCCTGAGTTGTGGATGGGTGTGAGGAGCCATTGCTGAGTTC  350

seq1  AGGGGCTCCCGCCCTCGCATCCCCCCAGAGGAGCCTCCACGCCTGCAAAC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCTCCCGCCCTCGCATCCCCCCAGAGGAGCCTCCACGCCTGCAAAC  400

seq1  AGGACCTTGAGTCAAATAGAATCCAAGTGTCCAGGACAAACAAGCTGCCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCTTGAGTCAAATAGAATCCAAGTGTCCAGGACAAACAAGCTGCCT  450

seq1  TTCTTAAGTGTCACCGGTAGCCATGGTGAGGGAGAGCAAACCACTTCCCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAGTGTCACCGGTAGCCATGGTGAGGGAGAGCAAACCACTTCCCC  500

seq1  CACGCTGCTTCTCAGAACTATGAGTTCTAGCTATTGGTCATGCCGGTGAC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCTGCTTCTCAGAACTATGAGTTCTAGCTATTGGTCATGCCGGTGAC  550

seq1  TCATCTCTGCAGCCCTTGCCGCCCTCCCTGTCTGTATGAGTCAGGCCTCT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCTGCAGCCCTTGCCGCCCTCCCTGTCTGTATGAGTCAGGCCTCT  600

seq1  CTAGATAAACAAATTGATAGAATGGCTCTATACAAAAAATGGAATGTATT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATAAACAAATTGATAGAATGGCTCTATACAAAAAATGGAATGTATT  650

seq1  AGAGTGCCTTACAGGTTAGTATCTGACTATTCTAACAACGGCTGTCTTCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCCTTACAGGTTAGTATCTGACTATTCTAACAACGGCTGTCTTCA  700

seq1  GATGGAAAAATCCCAAAATCCAGTAGTTTTTCGGACCTTAAGGCTGGACG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAAAAATCCCAAAATCCAGTAGTTTTTCGGACCTTAAGGCTGGACG  750

seq1  TCGCAGCTAGTTTGGGGGTTTGACAGAATCCCAAAGAAGTACACTCCAAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAGCTAGTTTGGGGGTTTGACAGAATCCCAAAGAAGTACACTCCAAT  800

seq1  ACCAGTGAAGGAAAGGTCTTGCCTATGAGTGTGAGGACAAGCAGGTAAAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGAAGGAAAGGTCTTGCCTATGAGTGTGAGGACAAGCAGGTAAAG  850

seq1  AATTC  850
      |||||
seq2  AATTC  855

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Alignment Information