MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-264B18
Chromosome	9 (Build37)
Map Location	103,035,647 - 103,188,792
singlet/doublet	doublet
Overlap gene	Rab6b, Srprb, Trf, 1300017J02Rik
Upstream gene	Ephb1, Ky, LOC664843, Cep63, Anapc13, Amotl2, EG434510, Ryk, Slco2a1
Downstream gene	Topbp1, Cdv3, Bfsp2, Tmem108, 4932413F04Rik, EG384978, Nphp3, Ube1dc1, Acad11, Ccrl1, Hmgb1-rs16
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ephb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270190 MGI:1096337
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ky (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16716 MGI:96709
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC664843 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664843
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Cep63 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:28135 MGI:2158560
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Anapc13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69010 MGI:1916260
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Amotl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56332 MGI:1929286
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG434510 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434510 MGI:3645308
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ryk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20187 MGI:101766
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Slco2a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:24059 MGI:1346021
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab6b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:270192 MGI:107283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Srprb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20818 MGI:102964
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22041 MGI:98821
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1300017J02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71775 MGI:1919025
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Topbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235559 MGI:1920018
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdv3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:321022 MGI:2448759
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Bfsp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107993 MGI:1333828
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem108 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81907 MGI:1932411
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4932413F04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319215 MGI:2441690
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs

name	EG384978 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384978 MGI:3645790
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Nphp3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74025 MGI:1921275
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ube1dc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66663 MGI:1913913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acad11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:102632 MGI:2143169
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ccrl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:252837 MGI:2181676
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hmgb1-rs16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15296 MGI:104765
definition	gene_synonym : Hmg1-rs16 note : high mobility group box 1, related sequence 16 pseudo : _no_value

name	Ephb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254273 GeneID:270190 MGI:1096337
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Eph receptor B1 transcript_id : NM_173447.2

name	Ky (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114145524 GeneID:16716 MGI:96709
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kyphoscoliosis peptidase transcript_id : NM_024291.3

name	Cep63 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487470 GeneID:28135 MGI:2158560
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centrosomal protein 63 transcript_id : NM_001081122.1

name	Anapc13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350699 GeneID:69010 MGI:1916260
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : anaphase promoting complex subunit 13 transcript_id : NM_181394.2

name	Amotl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119120837 GeneID:56332 MGI:1929286
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : angiomotin like 2 transcript_id : NM_019764.2

name	EG434510 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386580 GeneID:434510 MGI:3645308
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG434510 transcript_id : NM_001034892.2

name	Ryk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110681699 GeneID:20187 MGI:101766
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : receptor-like tyrosine kinase transcript_id : NM_013649.3

name	Ryk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110681701 GeneID:20187 MGI:101766
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : receptor-like tyrosine kinase transcript_id : NM_001042607.1

name	Slco2a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802538 GeneID:24059 MGI:1346021
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier organic anion transporter family, member 2a1 transcript_id : NM_033314.3

name	Rab6b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129903 GeneID:270192 MGI:107283
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB6B, member RAS oncogene family transcript_id : NM_173781.4

name	Srprb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375873 GeneID:20818 MGI:102964
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal recognition particle receptor, B subunit transcript_id : NM_009275.4

name	Trf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129942 GeneID:22041 MGI:98821
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transferrin transcript_id : NM_133977.2

name	1300017J02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801564 GeneID:71775 MGI:1919025
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1300017J02 gene transcript_id : NM_027918.2

name	Topbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130322 GeneID:235559 MGI:1920018
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : topoisomerase (DNA) II beta binding protein transcript_id : NM_176979.5

name	Cdv3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:28461293 GeneID:321022 MGI:2448759
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carnitine deficiency-associated gene expressed in ventricle 3 transcript_id : NM_175833.1

name	Cdv3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342196 GeneID:321022 MGI:2448759
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carnitine deficiency-associated gene expressed in ventricle 3 transcript_id : NM_175565.2

name	Bfsp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131084 GeneID:107993 MGI:1333828
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : beaded filament structural protein 2, phakinin transcript_id : NM_001002896.2

name	Tmem108 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381914 GeneID:81907 MGI:1932411
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 108 transcript_id : NM_178638.3

name	4932413F04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260309 GeneID:319215 MGI:2441690
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs product : RIKEN cDNA 4932413F04 gene transcript_id : XM_001004814.2

name	Nphp3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50878276 GeneID:74025 MGI:1921275
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nephronophthisis 3 (adolescent) transcript_id : NM_028721.2

name	Ube1dc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803582 GeneID:66663 MGI:1913913
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-activating enzyme E1-domain containing 1 transcript_id : NM_025692.2

name	Acad11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803267 GeneID:102632 MGI:2143169
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-Coenzyme A dehydrogenase family, member 11 transcript_id : NM_175324.3

name	Ccrl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21746186 GeneID:252837 MGI:2181676
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-C motif) receptor-like 1 transcript_id : NM_145700.1

name	Ephb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254274 GeneID:270190 MGI:1096337
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence TAS]; GO:0045121 - lipid raft [Evidence IDA]; GO:0016020 - membrane [Evidence IDA] GO_function : GO:0008046 - axon guidance receptor activity [Evidence IDA]; GO:0005005 - transmembrane-ephrin receptor activity [Evidence TAS] GO_process : GO:0007411 - axon guidance [Evidence IDA] codon_start : 1 exception : mismatches in translation note : ELK homolog product : Eph receptor B1 protein_id : NP_775623.2

name	Ky (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114145525 CCDS:CCDS23445.1 GeneID:16716 MGI:96709
definition	GO_process : GO:0007517 - muscle development [Evidence IMP]; GO:0007528 - neuromuscular junction development [Evidence IMP] codon_start : 1 product : kyphoscoliosis protein_id : NP_077253.3

name	Cep63 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487471 GeneID:28135 MGI:2158560
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : centrosome protein Cep63 product : centrosomal protein 63 protein_id : NP_001074591.1

name	Anapc13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31088920 GeneID:69010 MGI:1916260
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : anaphase promoting complex subunit 13 protein_id : NP_852059.1

name	Amotl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119120838 GeneID:56332 MGI:1929286
definition	GO_component : GO:0005923 - tight junction [Evidence IDA] GO_function : GO:0042802 - identical protein binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : angiomotin-like protein 2; Leman coiled-coil protein product : angiomotin like 2 protein_id : NP_062738.2

name	EG434510 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702248 GeneID:434510 MGI:3645308
definition	codon_start : 1 product : hypothetical protein LOC434510 protein_id : NP_001030064.1

name	Ryk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110681700 GeneID:20187 MGI:101766
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IDA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0042813 - Wnt receptor activity [Evidence IPI]; GO:0017147 - Wnt-protein binding [Evidence IPI] GO_process : GO:0007409 - axonogenesis [Evidence IGI]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0048705 - skeletal morphogenesis [Evidence IMP] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; growth factor receptor product : receptor-like tyrosine kinase isoform 1 protein_id : NP_038677.3

name	Ryk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110681702 GeneID:20187 MGI:101766
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IDA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0042813 - Wnt receptor activity [Evidence IPI]; GO:0017147 - Wnt-protein binding [Evidence IPI] GO_process : GO:0007409 - axonogenesis [Evidence IGI]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0048705 - skeletal morphogenesis [Evidence IMP] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; growth factor receptor product : receptor-like tyrosine kinase isoform 2 protein_id : NP_001036072.1

name	Slco2a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625831 CCDS:CCDS23448.1 GeneID:24059 MGI:1346021
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0015132 - prostaglandin transporter activity [Evidence IDA] GO_process : GO:0015732 - prostaglandin transport [Evidence IDA] codon_start : 1 note : solute carrier family 21 (prostaglandin transporter), member 2 product : solute carrier organic anion transporter family, member 2a1 protein_id : NP_201571.2

name	Rab6b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424655 CCDS:CCDS23449.1 GeneID:270192 MGI:107283
definition	GO_function : GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : RAB6B, member RAS oncogene family protein_id : NP_776142.1

name	Srprb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678137 CCDS:CCDS23450.1 GeneID:20818 MGI:102964
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005786 - signal recognition particle (sensu Eukaryota) [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : signal recognition particle receptor, B subunit protein_id : NP_033301.1

name	Trf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20330802 CCDS:CCDS23451.1 GeneID:22041 MGI:98821
definition	GO_component : GO:0030139 - endocytic vesicle [Evidence IDA] [Evidence ISS]; GO:0005768 - endosome [Evidence IDA] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : hypotransferrinemia with hemochromatosis product : transferrin protein_id : NP_598738.1

name	1300017J02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313642 CCDS:CCDS23452.1 GeneID:71775 MGI:1919025
definition	codon_start : 1 product : hypothetical protein LOC71775 protein_id : NP_082194.1

name	Topbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559817 CCDS:CCDS23453.1 GeneID:235559 MGI:1920018
definition	GO_component : GO:0000794 - condensed nuclear chromosome [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0007131 - meiotic recombination [Evidence ISS]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 product : topoisomerase (DNA) II beta binding protein protein_id : NP_795953.2

name	Cdv3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28461294 CCDS:CCDS23454.1 GeneID:321022 MGI:2448759
definition	codon_start : 1 note : isoform CDV3B is encoded by transcript variant CDV3B product : carnitine deficiency-associated gene expressed in ventricle 3 isoform CDV3B protein_id : NP_787027.1

name	Cdv3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28202071 GeneID:321022 MGI:2448759
definition	codon_start : 1 note : isoform CDV3A is encoded by transcript variant CDV3A product : carnitine deficiency-associated gene expressed in ventricle 3 isoform CDV3A protein_id : NP_780774.1

name	Bfsp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50872159 GeneID:107993 MGI:1333828
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005882 - intermediate filament [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005212 - structural constituent of eye lens [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IMP]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 product : beaded filament structural protein 2, phakinin protein_id : NP_001002896.1

name	Tmem108 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30519983 CCDS:CCDS23455.1 GeneID:81907 MGI:1932411
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : hypothetical protein LOC81907 protein_id : NP_848753.1

name	4932413F04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94386548 GeneID:319215 MGI:2441690
definition	codon_start : 1 product : hypothetical protein LOC319215 protein_id : XP_001004814.1

name	Nphp3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50878277 GeneID:74025 MGI:1921275
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0006629 - lipid metabolism [Evidence IMP] codon_start : 1 exception : unclassified translation discrepancy note : polycystic kidney disease product : nephrocystin 3 protein_id : NP_082997.2

name	Ube1dc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313374 CCDS:CCDS23457.1 GeneID:66663 MGI:1913913
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation product : ubiquitin-activating enzyme E1-domain containing 1 protein_id : NP_079968.1

name	Acad11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:74271799 CCDS:CCDS23458.1 GeneID:102632 MGI:2143169
definition	GO_function : GO:0003995 - acyl-CoA dehydrogenase activity [Evidence IEA]; GO:0050660 - FAD binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : acyl-Coenzyme A dehydrogenase family, member 11 protein_id : NP_780533.2

name	Ccrl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21746187 CCDS:CCDS23459.1 GeneID:252837 MGI:2181676
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016493 - C-C chemokine receptor activity [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : chemokine receptor CCX-CKR; chemokine receptor CCR11; chemokine (C-C) receptor-like 1 product : chemokine (C-C motif) receptor-like 1 protein_id : NP_663746.1

name	LOC664843 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664843
definition	number : 1 pseudo : _no_value

name	LOC664843 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664843
definition	number : 2 pseudo : _no_value

name	EG384978 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384978
definition	number : 1 pseudo : _no_value

name	EG384978 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384978
definition	number : 2 pseudo : _no_value

clone name	MSMg01-488M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-175J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226L11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104A15
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-264B18.b	B6Ng01-264B18.g
ACC	GA068099	GA068100
length	163	263
definition	B6Ng01-264B18.b	B6Ng01-264B18.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(103,188,630 - 103,188,792)	(103,035,647 - 103,035,909)
sequence	accaaagacagaaggaagcagtagtagagaattagctacactgtggcaca accagtaggcagtagaaacagtttaaacagaaactttgtaagaactgggg aggggtgcatgtgtgcttgcttgagtgtgtgtgtgtgtgtgtgtgtgtgt gtgtgtgtgtgtg	tgtgttgctaagctctttctttggatcccctgatcgatcctgctctttct tgctctcacagaagggctgtaatcctcagggattgcaatggcttcaaggt caacacccagtcagggccacataggaggccagaactcccttctgttggcc tggatccccacttctccagccagcacagaggatggtaatgaagagacatc tgagtcaggacaagcttccagaacactgggcttagaggaagtggggctgt gggggtggggtgg
quality values	Open. Hide. 16 62 49 43 62 62 49 62 51 49 59 62 59 59 59 62 59 59 59 59 36 49 62 43 59 32 17 38 22 46 30 49 50 49 43 59 62 62 62 49 62 59 59 59 62 59 62 59 59 51 62 62 59 59 59 62 62 59 59 62 59 59 62 62 62 62 62 62 62 59 59 62 62 59 54 43 43 56 46 49 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 59 62 62 59 59 59 62 59 59 62 62 62 59 62 62 62 62 62 62 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 54 59 59 59 59 59 59 59 59 59 59 59 59 59 30 16 15	Open. Hide. 59 59 59 62 62 51 46 35 28 46 50 36 54 56 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 56 62 42 54 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 59 62 62 62 62 62 62 59 62 49 49 62 56 62 46 62 62 62 62 56 56 62 56 62 62 62 62 62 56 62 62 62 62 56 62 18

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_103188630_103188792
seq2: B6Ng01-264B18.b_47_209 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACACTCAAGCAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACTCAAGCAAGCA  50

seq1  CACATGCACCCCTCCCCAGTTCTTACAAAGTTTCTGTTTAAACTGTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCACCCCTCCCCAGTTCTTACAAAGTTTCTGTTTAAACTGTTTCT  100

seq1  ACTGCCTACTGGTTGTGCCACAGTGTAGCTAATTCTCTACTACTGCTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTACTGGTTGTGCCACAGTGTAGCTAATTCTCTACTACTGCTTCC  150

seq1  TTCTGTCTTTGGT  163
      |||||||||||||
seq2  TTCTGTCTTTGGT  163

seq1: chr9_103035647_103035909
seq2: B6Ng01-264B18.g_76_338

seq1  TGTGTTGCTAAGCTCTTTCTTTGGATCCCCTGATCGATCCTGCTCTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGCTAAGCTCTTTCTTTGGATCCCCTGATCGATCCTGCTCTTTCT  50

seq1  TGCTCTCACAGAAGGGCTGTAATCCTCAGGGATTGCAATGGCTTCAAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCACAGAAGGGCTGTAATCCTCAGGGATTGCAATGGCTTCAAGGT  100

seq1  CAACACCCAGTCAGGGCCACATAGGAGGCCAGAACTCCCTTCTGTTGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACCCAGTCAGGGCCACATAGGAGGCCAGAACTCCCTTCTGTTGGCC  150

seq1  TGGATCCCCACTTCTCCAGCCAGCACAGAGGATGGTAATGAAGAGACATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCCCCACTTCTCCAGCCAGCACAGAGGATGGTAATGAAGAGACATC  200

seq1  TGAGTCAGGACAAGCTTCCAGAACACTGGGCTTAGAGGAAGTGGGGCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCAGGACAAGCTTCCAGAACACTGGGCTTAGAGGAAGTGGGGCTGT  250

seq1  GGGGGTGGGGTGG  263
      |||||||||||||
seq2  GGGGGTGGGGTGG  263

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information