BAC Information

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BAC

Clone NameB6Ng01-264H23
Chromosome9 (Build37)
Map Location 121,322,126 - 121,475,268
singlet/doubletdoublet
Overlap geneTrak1, Cck
Upstream geneMyrip, Eif1b, LOC638068, Entpd3, Rpl14, 5830454E08Rik, LOC100040010, Ctnnb1, Ulk4
Downstream geneLyzl4, Vipr1, LOC100040063, Sec22c, Deb1, Nktr, Kbtbd5, Hhatl, Ccdc13, Higd1a, Ccbp2, Cyp8b1, C730027P07Rik, C85492, LOC100040121, Snrk, Tmem16k, Abhd5, LOC100040193, LOC100040204
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264H23.bB6Ng01-264H23.g
ACCGA068386GA068387
length1,085794
definitionB6Ng01-264H23.b B6Ng01-264H23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,322,126 - 121,323,166)(121,474,475 - 121,475,268)
sequence
gaattcatacagttgaatccttcttaacagtctgctttacgggaaccttt
atcaccgtcgttccccagctgatgagttctgaattcggcagttgaatcct
tctcaacagtctgtgttacgggaacctttataaacgtgatccgcagttct
ggttctgaaatgaagtatccctcctgcgccagtccggagttttttctcgt
cccgggttttcggcaccaattgttattcgatgcgttctcacgaccggcca
ggaagaacacaacaaccagaatcttctacggcaaagctttattgcttaca
tcttatggggccagagtgtaagaagcaagagagagagaaaacgaaacccc
tttcctctttaaagagaacaacaattgcctaggacgcatcactccctgat
tggctgcagcccatggccgagctgacgttcacgggaaaaacagagtacaa
gtagtcgtaaatacccttggcacatgcgcagattatttgtttaccaactt
agaacacaggatgtcagcgccatcttgtgacggcgaatgtgggggcggct
tcccacagaatgcatccacgcgtacccagatttcacagtctaaactctga
gctaagcagtgttattcactttcattgggtaaagttttgttagtagcttc
ttctttttttttttttttttaatttttgacagattctcttgtagtccagg
ctggccttaaatttgctttgtagtcaaggaagaccttgaacctggtcctc
ctgcctccacctacagagggctaagactacagtgccaatgtcataagtga
ggtcaccaggaaatgaccctccatgatgggccaacggtgctctgtgacaa
ccagagagcatggcagccagactgaatcagacccaagctgaaggaggatg
agtccgtcagccactacaaggagggccagaggacagcacctctctgtgga
gaggggaaaggcagatggagcaagtcttagcgtctggaccctgatgaaaa
tacacaggatttgatctttcacgcgcttttctgtaaccagcctatgtcag
agaactcgcagagccttgctagtctgggcggtgca
gaattcacatggcaggggttgtgtgctcattctttgaatgggattttttt
tcttgatttcttttcagataattcacctcatttaaaaggaaagagtttat
cttttcagctccactgggatatcagccatgggcttgttacctggagcctt
tatggggtgaaggacatttcagagattttctttaaattatttttatttta
ttttacatgttagggtgttttggttgcatgcatgtagtgcttgaggaagc
cagaagagggcgtcagatctcctggaactagagttacagactattgtgag
atgccatatgggtgctgggagtcaagcctaagtgttcgggagcggacagt
gatcttaatctcggagccattaatttatgcgggactttgctgaatacctt
tagtctctgctagattcccctgtggtcttggccctttggttaacactaat
tttacctcttaaactcttggtcgtgggatgagaaacacttgatcagggaa
aaggtctgtttactgtacagtgctgctgggtttgccttgctgggatttag
ttgttgatttttgcatctgggtcaatcagggttatcatcctacaattttg
ttttatgtttttatagcatccttccctggctttgatatcaaagccatttc
cctgataacagatattttcagattcttttgcaggggaattttaagacttt
ggaaaatgtatttgatcagacccagcaacacaagcactgagttctgggcc
tttcccttctctctctctctctctctctctctctctctctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_121322126_121323166
seq2: B6Ng01-264H23.b_102_1128

seq1  CGTTCCCCAGCTGATGAGTTCTGAATTCGGCAGTTGAATCCTTCTCAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCCCCAGCTGATGAGTTCTGAATTCGGCAGTTGAATCCTTCTCAACA  50

seq1  GTCTGTGTTACGGGAACCTTTATAAACGTGATCCGCAGTTCTGGTTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGTTACGGGAACCTTTATAAACGTGATCCGCAGTTCTGGTTCTGA  100

seq1  AATGAAGTATCCCTCCTGCGCCAGTCCGGAGTTTTTTCTCGTCCCGGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGTATCCCTCCTGCGCCAGTCCGGAGTTTTTTCTCGTCCCGGGTT  150

seq1  TTCGGCACCAATTGTTATTCGATGCGTTCTCACGACCGGCCAGGAAGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGCACCAATTGTTATTCGATGCGTTCTCACGACCGGCCAGGAAGAAC  200

seq1  ACAACAACCAGAATCTTCTACGGCAAAGCTTTATTGCTTACATCTTATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACCAGAATCTTCTACGGCAAAGCTTTATTGCTTACATCTTATGG  250

seq1  GGCCAGAGTGTAAGAAGCAAGAGAGAGAGAAAACGAAACCCCTTTCCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGAGTGTAAGAAGCAAGAGAGAGAGAAAACGAAACCCCTTTCCTCT  300

seq1  TTAAAGAGAACAACAATTGCCTAGGACGCATCACTCCCTGATTGGCTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAGAACAACAATTGCCTAGGACGCATCACTCCCTGATTGGCTGCA  350

seq1  GCCCATGGCCGAGCTGACGTTCACGGGAAAAACAGAGTACAAGTAGTCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATGGCCGAGCTGACGTTCACGGGAAAAACAGAGTACAAGTAGTCGT  400

seq1  AAATACCCTTGGCACATGCGCAGATTATTTGTTTACCAACTTAGAACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCCTTGGCACATGCGCAGATTATTTGTTTACCAACTTAGAACACA  450

seq1  GGATGTCAGCGCCATCTTGTGACGGCGAATGTGGGGGCGGCTTCCCACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTCAGCGCCATCTTGTGACGGCGAATGTGGGGGCGGCTTCCCACAG  500

seq1  AATGCATCCACGCGTACCCAGATTTCACAGTCTAAACTCTGAGCTAAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATCCACGCGTACCCAGATTTCACAGTCTAAACTCTGAGCTAAGCA  550

seq1  GTGTTATTCACTTTCATTGGGTAAAGTTTTGTTAGTAGCTTCTTCTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTATTCACTTTCATTGGGTAAAGTTTTGTTAGTAGCTTCTTCTTTTT  600

seq1  TTTTTTTTTTTTAATTTTTGACAGATTCTCTTGTAGTCCAGGCTGGCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTAATTTTTGACAGATTCTCTTGTAGTCCAGGCTGGCCTT  650

seq1  AAATTTGCTTTGTAGTCAAGGAAGACCTTGAACCTGGTCCTCCTGCCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGCTTTGTAGTCAAGGAAGACCTTGAACCTGGTCCTCCTGCCTCC  700

seq1  ACCTACAGAGGGCTAAGACTACAGTGCCAATGTCATAAGTGAGGTCACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACAGAGGGCTAAGACTACAGTGCCAATGTCATAAGTGAGGTCACCA  750

seq1  GGAAATGACCCTCCATGATGGGCCAACGGTGCTCTGTGAC-ACCAGAGAG  799
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GGAAATGACCCTCCATGATGGGCCAACGGTGCTCTGTGACAACCAGAGAG  800

seq1  CATGGCAGCCAGACTGAATCAGACCCAAGCTGAAGGAGGATGAGTCCCGT  849
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CATGGCAGCCAGACTGAATCAGACCCAAGCTGAAGGAGGATGAGT-CCGT  849

seq1  CAGCCACTACAAGGAGGGCCAGAGGACAGCACCTCTCTGTGGAGA-GGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAGCCACTACAAGGAGGGCCAGAGGACAGCACCTCTCTGTGGAGAGGGGA  899

seq1  AAGGCAGATGGAGCAAGTCTTAGCGTCTGGGACCCTGGATGAAAATACAC  948
      |||||||||||||||||||||||||||| ||||||| |||||||||||||
seq2  AAGGCAGATGGAGCAAGTCTTAGCGTCT-GGACCCT-GATGAAAATACAC  947

seq1  AGGGATTTTGGTTCCTTTTCACGCGGCTTTTCTGTAAACACAGCTATGTC  998
      | ||||||  | ||  |||||||| |||||||||||| ||   |||||| 
seq2  A-GGATTT--GATC--TTTCACGC-GCTTTTCTGTAACCA-GCCTATGT-  989

seq1  CAGAGAAATTCGCAGAGCCTCTGCTTAGTTCTGGGGCGGTGCA  1041
      ||||| || ||||||||||| ||| ||| ||| ||||||||||
seq2  CAGAG-AACTCGCAGAGCCT-TGC-TAG-TCT-GGGCGGTGCA  1027

seq1: chr9_121474475_121475268
seq2: B6Ng01-264H23.g_67_860 (reverse)

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGGAAAGGCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGGAAAGGCCCA  50

seq1  GAACTCAGTGCTTGTGTTGCTGGGTCTGATCAAATACATTTTCCAAAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGTGCTTGTGTTGCTGGGTCTGATCAAATACATTTTCCAAAGTC  100

seq1  TTAAAATTCCCCTGCAAAAGAATCTGAAAATATCTGTTATCAGGGAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTCCCCTGCAAAAGAATCTGAAAATATCTGTTATCAGGGAAATG  150

seq1  GCTTTGATATCAAAGCCAGGGAAGGATGCTATAAAAACATAAAACAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGATATCAAAGCCAGGGAAGGATGCTATAAAAACATAAAACAAAAT  200

seq1  TGTAGGATGATAACCCTGATTGACCCAGATGCAAAAATCAACAACTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGATGATAACCCTGATTGACCCAGATGCAAAAATCAACAACTAAAT  250

seq1  CCCAGCAAGGCAAACCCAGCAGCACTGTACAGTAAACAGACCTTTTCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCAAGGCAAACCCAGCAGCACTGTACAGTAAACAGACCTTTTCCCT  300

seq1  GATCAAGTGTTTCTCATCCCACGACCAAGAGTTTAAGAGGTAAAATTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAGTGTTTCTCATCCCACGACCAAGAGTTTAAGAGGTAAAATTAGT  350

seq1  GTTAACCAAAGGGCCAAGACCACAGGGGAATCTAGCAGAGACTAAAGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACCAAAGGGCCAAGACCACAGGGGAATCTAGCAGAGACTAAAGGTA  400

seq1  TTCAGCAAAGTCCCGCATAAATTAATGGCTCCGAGATTAAGATCACTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCAAAGTCCCGCATAAATTAATGGCTCCGAGATTAAGATCACTGTC  450

seq1  CGCTCCCGAACACTTAGGCTTGACTCCCAGCACCCATATGGCATCTCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCCCGAACACTTAGGCTTGACTCCCAGCACCCATATGGCATCTCACA  500

seq1  ATAGTCTGTAACTCTAGTTCCAGGAGATCTGACGCCCTCTTCTGGCTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCTGTAACTCTAGTTCCAGGAGATCTGACGCCCTCTTCTGGCTTCC  550

seq1  TCAAGCACTACATGCATGCAACCAAAACACCCTAACATGTAAAATAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCACTACATGCATGCAACCAAAACACCCTAACATGTAAAATAAAAT  600

seq1  AAAAATAATTTAAAGAAAATCTCTGAAATGTCCTTCACCCCATAAAGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAATTTAAAGAAAATCTCTGAAATGTCCTTCACCCCATAAAGGCT  650

seq1  CCAGGTAACAAGCCCATGGCTGATATCCCAGTGGAGCTGAAAAGATAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTAACAAGCCCATGGCTGATATCCCAGTGGAGCTGAAAAGATAAAC  700

seq1  TCTTTCCTTTTAAATGAGGTGAATTATCTGAAAAGAAATCAAGAAAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTTTTAAATGAGGTGAATTATCTGAAAAGAAATCAAGAAAAAAA  750

seq1  ATCCCATTCAAAGAATGAGCACACAACCCCTGCCATGTGAATTC  794
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCATTCAAAGAATGAGCACACAACCCCTGCCATGTGAATTC  794