BAC Information

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BAC

Clone NameB6Ng01-264M06
Chromosome9 (Build37)
Map Location 3,770,261 - 3,771,068
singlet/doubletsinglet
Overlap geneGucy1a2
Upstream gene4930433N12Rik, LOC664797, Olfr369-ps1, Alkbh8, Cwf19l2, LOC384911
Downstream geneLOC100039236, LOC384912, LOC100039253, Aasdhppt, Kbtbd3, LOC664860, 8430410K20Rik, Gria4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264M06.bB6Ng01-264M06.g
ACCGA068586GA068587
length1,228843
definitionB6Ng01-264M06.b B6Ng01-264M06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcgtgggcccactgtcacacttctctggctgtgaaatga
tttccttggtcagaagcaatactgtatggaacaccatgacaatatataag
gcattctgtgagtccatggatggtggttttagcagaagcattacatgcag
gaaaggcaaatccataaccagaataagtatctactccagtacgaacaaaa
tgctctcctttccacggaggaagtggttcaatgtagtcaacctgccacca
ggttgctggctggtcacctagaggaatgatgcaatatctggggctcagtg
ttggtttctgctgttggcagatctggaattcagcagcagctgtagctagg
tcagccttggtgagtggaagtccatgttgctgagcccaagcataacctcc
atctcgaccaccatggccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagagaggctgactgtccacagaatgggtcattttatcc
acttgattattgaactcctcctcagctgaagtcaccttttggtgagcatt
tacattggacacaaatatcttcacatccttggcccatttggagagatcta
tccacataattattccccagatgtctttctcgccaattttccaattgtga
tctttccaagtccctgaccatccaagccaatccattggctacagcccatg
agtcagtgaataatcatacatctggccgtttcttcttacaaacaaactgt
aatactatgtgtactgctcgaagttgtgcccactgtgaagatttcccttc
acctgtgtctttcagggttgttccggaaaggggttgtaatgctgcagctg
tccactctgcctgcataacatgcagagtcatcagtaaaccaggtcctagt
cttctcctcttcagtcagccaatcatagggaaaaccctaatgaggttata
ggtgcatgcttgacagcagatggcattgtaacaggagtagaaaccacagg
catttgagcaaccttctacatgtaacttgcttgtgccttcaggaccctgt
tctggcctgaatcattgtatatatacccactttccatttggataatgttg
cattgtcctactttattgacttggtaagggtctgataggtaccagatcat
gtcacacaatgtaccttgagtctgtctagagttcctattctgccaaacca
tctctagaccatttagagaagagcacta
gaattccagggccaggaaacgggagttggtgggttggggagcaggacgga
aggagggtataggggacttttggtatagcatttgaaatgtaaatgaagaa
aatatctaataaaaaatgaaataaaaaagattttatttttttcaaagatg
agttttgagacacacattcacatcaatacataaacacagaattcagaagt
agagataaataaatgtccatagtaaaacatttctcatagaaagttatcat
gtgtttttcatagaaatttcatagaaaactgcatgtgtttgtttgtttgt
ctgtgtatttattatgtgtgtgttttatcatgtgagtgccatggtacaca
ttggaagtcagagaacaaattgaggaattgattttttcttttgtttttgt
tttaatttatttgttacactccacattccattccccacccccatccaccc
ttctacagctccacatcccacaccctgtgtctccacatggatgtctccac
ccctcattctacctgacctctatactccgttggtcctccagtctcttgag
gctttagtgcatcatctctgaatgaacacagaccaggaagtcctctactg
tatgtgtgttggagacctcatatcaactagtgtatgctctctatttggtg
gtccaatgtttgagagatctttgggggtccagattcattgagatggctgg
tccacctaaaggattgcctttctcatcagcttcttttcagccttccccaa
ttcaacaactggggtcagctttcttctgtctattggttgggtaaaaatat
ctgcatctgactcttttagatgcttgtcgagtctttagaaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_3770261_3771068
seq2: B6Ng01-264M06.g_68_878

seq1  GAATTCCAGGGCCAGGAAACGGGAGTTGGTGGGTTGGGGAGCAGGACGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGCCAGGAAACGGGAGTTGGTGGGTTGGGGAGCAGGACGGA  50

seq1  AGGAGGGTATAGGGGACTTTTGGTATAGCATTTGAAATGTAAATGAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGTATAGGGGACTTTTGGTATAGCATTTGAAATGTAAATGAAGAA  100

seq1  AATATCTAATAAAAAATGAAATAAAAAAGATTTTATTTTTTTCAAAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTAATAAAAAATGAAATAAAAAAGATTTTATTTTTTTCAAAGATG  150

seq1  AGTTTTGAGACACACATTCACATCAATACATAAACACAGAATTCAGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGAGACACACATTCACATCAATACATAAACACAGAATTCAGAAGT  200

seq1  AGAGATAAATAAATGTCCATAGTAAAACATTTCTCATAGAAAGTTATCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATAAATAAATGTCCATAGTAAAACATTTCTCATAGAAAGTTATCAT  250

seq1  GTGTTTTTCATAGAAATTTCATAGAAAACTGCATGTGTTTGTTTGTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTTCATAGAAATTTCATAGAAAACTGCATGTGTTTGTTTGTTTGT  300

seq1  CTGTGTATTTATTATGTGTGTGTTTTATCATGTGAGTGCCATGGTACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTATTTATTATGTGTGTGTTTTATCATGTGAGTGCCATGGTACACA  350

seq1  TTGGAAGTCAGAGAACAAATTGAGGAATTGATTTTTTCTTTTGTTTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGTCAGAGAACAAATTGAGGAATTGATTTTTTCTTTTGTTTTTGT  400

seq1  TTTAATTTATTTGTTACACTCCACATTCCATTCCCCACCCCCATCCACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTATTTGTTACACTCCACATTCCATTCCCCACCCCCATCCACCC  450

seq1  TTCTACAGCTCCACATCCCACACCCTGTGTCTCCACATGGATGTCTCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAGCTCCACATCCCACACCCTGTGTCTCCACATGGATGTCTCCAC  500

seq1  CCCTCATTCTACCTGACCTCTATACTCCGTTGGTCCTCCAGTCTCTTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCATTCTACCTGACCTCTATACTCCGTTGGTCCTCCAGTCTCTTGAG  550

seq1  GCTTTAGTGCATCATCTCTGAATGAACACAGACCAGGAAGTCCTCTACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAGTGCATCATCTCTGAATGAACACAGACCAGGAAGTCCTCTACTG  600

seq1  TATGTGTGTTGGAGACCTCATATCAACTAGTGTATGCTCTCTATTTGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTGTTGGAGACCTCATATCAACTAGTGTATGCTCTCTATTTGGTG  650

seq1  GTCCAATGTTTGAGAGATC-TTGGGGGTCCAGATTCATTGAGATGGCTGG  699
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTCCAATGTTTGAGAGATCTTTGGGGGTCCAGATTCATTGAGATGGCTGG  700

seq1  TCCACCTAAAGGATTGCCTTTCTCATCAGCTTC-TTTCAGCCTTCCCCAA  748
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCCACCTAAAGGATTGCCTTTCTCATCAGCTTCTTTTCAGCCTTCCCCAA  750

seq1  TTCAACAACTGGGGTCAGC-TTCTTCTGTCTATTGGTTGGGTAAAAATAT  797
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTCAACAACTGGGGTCAGCTTTCTTCTGTCTATTGGTTGGGTAAAAATAT  800

seq1  CTGCATCTGAC  808
      |||||||||||
seq2  CTGCATCTGAC  811