BAC Information

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BAC

Clone NameB6Ng01-268F15
Chromosome9 (Build37)
Map Location 90,174,337 - 90,175,432
singlet/doubletsinglet
Overlap genenone
Upstream geneAF529169, Tmed3, B230218L05Rik, Rasgrf1, Ctsh, Morf4l1, LOC621414, Adamts7, Tbc1d2b
Downstream geneLOC100039777, LOC100039925, EG434428, LOC621576
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268F15.bB6Ng01-268F15.g
ACCGA071231GA071232
length1,2231,094
definitionB6Ng01-268F15.b B6Ng01-268F15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatgacaatgcaatataccaaaacttatggaatacaatgaaagc
aaagggaaaattgatgatggcccacaacagtttgtaaaaataaggaaagg
aaaaaaaactcaaacattagataagaagaaatcaggataaaactaatgga
atgaggaaaaaacaaaaaatcattaaatattttgttttcaaaaagataaa
agaatttggcaaacctttagatgatttaactaacaggaagaagaatacca
aaattaataaaataagagacagacagacactaaaacaaacacaaaaaaat
ccagaaaattataaaggcattctttaagaacctttattctattaagttgg
aaaacttaaacaaaatgggtgagtttctagatacccatcacccaccaaag
ctaatccaagataagaagaatgatttaaacaaacctataaaaatatagga
aagtgaaacagtaatttaaaaaaaaatctgactaaagtaagaccaggtcc
agatggattaataacagaattcaactcgatatttcaagaggagactaaaa
caatgtttttggaactattctacaaaataaaaatagaaggaacagttaca
aactttttctacaaggccactatcactgtaacaccaaaaccagataacac
aacaaataagatatctacagacctacattcctggtgaagatagatgcaaa
atctctcaacaaaatatttggaaattaaatataggcatgcatcaaaagat
aatttgataggacaaaatgtgcttatcctagagatataaggatggcttca
gaaatgcaaatatatacaagtagcaagttatataaacataattaaacaca
tacatacacacacactcacaaactgaccatctcaataaatgcagaagggc
ctttgataaaatcctacattctttcatgataaaatccatgtgggaaatac
acctcataataaagattacatatggcaaactcatagtatatatcacccta
aatggaaaaaaaattgaagctatcccatcaaatcaggaacaagatgggat
tatccaataactctacttctattcaggagcagtgctcaaagtgctagccg
aaatacagacaggaaaaggaaataaagtccacacaaatagggaaaagaag
tccaaggtattctgtgaaattgatgcttctaataggacttaggtcttctc
tcttcctctctcatcgtctcccg
gaattcactgttgtggaactgccccacatagaaggtgacagtgtgaagat
attcaaatgacatggccacattgtacattaaaatatgtgaagggattgga
gagatcccttactgctcttgcagtgagttcacttctcagcactggaatgg
ctgttcataagcacccatctgtaactctagttacaggggatctgatgctc
tcttctggcctccttgtgaaccaggcatgcacatagtacacagacacgca
tgcaaacactcatacatagaaactcacatcaaatgcaaataaatatttag
ttttttaaatgtgagagataaagagatggctcagttctgagagcacaaag
acttgaatttggacctccagaatacatgtaaaagtcaggtgtgatgacat
acatatatgtaacctcagctctgggtgaggggggtggtgtcagagactgg
aagaagctcagagcttaatggtcatccagcagagccaaaacaatgacctt
caaattcagtgagagactctgcctcaaaaaaaaaaaaaaaagatggtcag
tgataaagaaaaaagatgacaaatgtggacctgtagcctcgacaggcaca
aagaagggcaaggaaactgtcacatacatatgtttgttcacacatgcacc
cccacacaactgtggttcttttaattgtttgttttaaattttttgatggg
gttatttttatgattttgcttttggaatgacttgccttttttggtattca
tagaattggcaatttacaaggattttcttcctccacatttgaggatttct
atgaggcaagacaatctgctctttcaaaccattttcacgtgtgagcatgc
tcttatgactaatgaatgaagcatatgcaaccgtttccctgtcttgacat
tgactgacatacttactctgtgattctgtagttttctcttttgggatttt
agagacagagcttctttttgttttgtttccaaggttcagaccttttatag
aggtctcaaaaaaaaaaagctatggtaattgataacacagaaattccaac
accggcctcaggaaatttcaaaggagaatacataactcagtaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_90174337_90175432
seq2: B6Ng01-268F15.g_68_1161

seq1  GAATTCACTGTTGTGGAACTGCCCCACATAGAAGGTGACAGTGTGAAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTTGTGGAACTGCCCCACATAGAAGGTGACAGTGTGAAGAT  50

seq1  ATTCAAATGACATGGCCACATTGTACATTAAAATATGTGAAGGGATTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATGACATGGCCACATTGTACATTAAAATATGTGAAGGGATTGGA  100

seq1  GAGATCCCTTACTGCTCTTGCAGTGAGTTCACTTCTCAGCACTGGAATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCCCTTACTGCTCTTGCAGTGAGTTCACTTCTCAGCACTGGAATGG  150

seq1  CTGTTCATAAGCACCCATCTGTAACTCTAGTTACAGGGGATCTGATGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCATAAGCACCCATCTGTAACTCTAGTTACAGGGGATCTGATGCTC  200

seq1  TCTTCTGGCCTCCTTGTGAACCAGGCATGCACATAGTACACAGACACGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGGCCTCCTTGTGAACCAGGCATGCACATAGTACACAGACACGCA  250

seq1  TGCAAACACTCATACATAGAAACTCACATCAAATGCAAATAAATATTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACACTCATACATAGAAACTCACATCAAATGCAAATAAATATTTAG  300

seq1  TTTTTTAAATGTGAGAGATAAAGAGATGGCTCAGTTCTGAGAGCACAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAATGTGAGAGATAAAGAGATGGCTCAGTTCTGAGAGCACAAAG  350

seq1  ACTTGAATTTGGACCTCCAGAATACATGTAAAAGTCAGGTGTGATGACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAATTTGGACCTCCAGAATACATGTAAAAGTCAGGTGTGATGACAT  400

seq1  ACATATATGTAACCTCAGCTCTGGGTGAGGGGGGTGGTGTCAGAGACTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATGTAACCTCAGCTCTGGGTGAGGGGGGTGGTGTCAGAGACTGG  450

seq1  AAGAAGCTCAGAGCTTAATGGTCATCCAGCAGAGCCAAAACAATGACCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCTCAGAGCTTAATGGTCATCCAGCAGAGCCAAAACAATGACCTT  500

seq1  CAAATTCAGTGAGAGACTCTGCCTCAAAAAAAAAAAAAAAAGATGGTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCAGTGAGAGACTCTGCCTCAAAAAAAAAAAAAAAAGATGGTCAG  550

seq1  TGATAAAGAAAAAAGATGACAAATGTGGACCTGTAGCCTCGACAGGCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAAGAAAAAAGATGACAAATGTGGACCTGTAGCCTCGACAGGCACA  600

seq1  AAGAAGGGCAAGGAAACTGTCACATACATATGTTTGTTCACACATGCACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGGCAAGGAAACTGTCACATACATATGTTTGTTCACACATGCACC  650

seq1  CCCACACAACTGTGGTTCTTTTAATTGTTTGTTTTAAATTTTTTGATGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACAACTGTGGTTCTTTTAATTGTTTGTTTTAAATTTTTTGATGGG  700

seq1  GTTATTTTTATGATTTTGCTTTTGGAATGACTTGCCTTTTTTGGTATTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTTTATGATTTTGCTTTTGGAATGACTTGCCTTTTTTGGTATTCA  750

seq1  TAGAATTGGCAATTTACAAGGATTTTCTTCCTCCACATTTGAGGATTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTGGCAATTTACAAGGATTTTCTTCCTCCACATTTGAGGATTTCT  800

seq1  ATGAGGCAAGACAATCTGCTC-TTCAAACCA-TTTCACGTGTGAGCATGC  848
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  ATGAGGCAAGACAATCTGCTCTTTCAAACCATTTTCACGTGTGAGCATGC  850

seq1  TCTTATGACTAATGAATGAAGCATATGCAACCG-TTCCCTGTCTTGACAT  897
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCTTATGACTAATGAATGAAGCATATGCAACCGTTTCCCTGTCTTGACAT  900

seq1  TGACTGACATACTTACTCTGTGATTCTGTAGTTTTCTCTTTTTGGATTTT  947
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGACTGACATACTTACTCTGTGATTCTGTAGTTTTCTCTTTTGGGATTTT  950

seq1  AGAGACAGAGC-TCTTTTTGTTTTGTTTTCCAAGGTTTCAGACC-TTTAT  995
      ||||||||||| ||||||||||||| ||||||||| |||||||| |||||
seq2  AGAGACAGAGCTTCTTTTTGTTTTG-TTTCCAAGG-TTCAGACCTTTTAT  998

seq1  AGAGGTTCTCAAAAAAAAAAAAAAAGCAAT-GTAAATGATAACAACCAAG  1044
      ||||| ||||    ||||||||||||| || |||| ||||||||    ||
seq2  AGAGG-TCTC----AAAAAAAAAAAGCTATGGTAATTGATAACA---CAG  1040

seq1  AAATTTCAAACAACCAGCTCAAGAAATTTCAAAGGAG-ATAATTA--TCA  1091
      ||| ||| |||| |   |||| ||||||||||||||| |||  ||  |||
seq2  AAA-TTCCAACACCGGCCTCAGGAAATTTCAAAGGAGAATACATAACTCA  1089

seq1  GTAAG  1096
      |||||
seq2  GTAAG  1094