BAC Information

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BAC

Clone NameB6Ng01-270M21
Chromosome9 (Build37)
Map Location 73,564,768 - 73,565,755
singlet/doubletsinglet
Overlap geneUnc13c
Upstream geneNedd4, Prtg, LOC100040694, Pygo1, Dyx1c1, EG546143, Ccpg1, LOC100041896, Pigb, Rab27a, 2410004A20Rik, BC003885, EG436081
Downstream geneWdr72, Nr1h2-ps, LOC100040764
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270M21.bB6Ng01-270M21.g
ACCGA073051GA073052
length941993
definitionB6Ng01-270M21.b B6Ng01-270M21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgatttgc
attcttctacaagataacaaccagttgtgccggcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgctttcggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagttttatcatac
agatctttcacttccttagttagagtcacgcccagatattt
gaattccatgagtcatctgggaagcagttagcttccaggaaaggatgctg
ctcctaagaaaatgtcatgtatggattcagttcagtttgtcttagtcgat
aagttttgttcctatagcttgactcttttataacttagcctagccttatt
gttgaagtggaagattgaaagtgaggactggcaggtgggcttttgaaagc
atgtggaactaaccatgttcaataaactcaagaaagcattatggtcaggc
aggaacaaagtgccctcgatagacagaaagaccatagcagcaggaaagct
ttctctcttgccttcaggcagtaagaccctctcattttaaaagattattt
tatatttatcatgtgcaggtatgagtgtgtgtgtgtgtgtgtgtgtgtgt
tttcctcataagagtaataccttaagaaagtatcagatcctctggggcta
gagctactgatatctgtgagccacccacattggtgctgggaactgtctat
tccttgcaatagaagcaaacaccccttgaccactcctctagctctctctg
ttttttctttgataaagactttttattgaaggttagatttttccttcaaa
aaaaaaaagcggtccccaaacaaaaaagaaaacaacccccccaaacaaaa
acaaacaaacaaacaaatgaaaacctatgtttgcaatgccaagctctatc
tgttatctgatgagttctgttttgctgaatggataccctagattcttatt
ccctcactatgcacaaggagattaaaaccaagcttcctatttgagaagga
gccaagacatcatttcttttctttcttttcatattttttttttttttttg
ggttctctacaagacagggtttctcttgtgcagccctggcttgtcctgga
actacacttctgtagaactaggctggacttcaaactcaagaaatctgcct
gcctttgcctccaatcaatttctatatacctctgatttacatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_73564768_73565755
seq2: B6Ng01-270M21.g_64_1056

seq1  GAATTCCATGAGTCATCTGGGAAGCAGTTAGCTTCCAGGAAAGGATGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGAGTCATCTGGGAAGCAGTTAGCTTCCAGGAAAGGATGCTG  50

seq1  CTCCTAAGAAAATGTCATGTATGGATTCAGTTCAGTTTGTCTTAGTCGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAAGAAAATGTCATGTATGGATTCAGTTCAGTTTGTCTTAGTCGAT  100

seq1  AAGTTTTGTTCCTATAGCTTGACTCTTTTATAACTTAGCCTAGCCTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTGTTCCTATAGCTTGACTCTTTTATAACTTAGCCTAGCCTTATT  150

seq1  GTTGAAGTGGAAGATTGAAAGTGAGGACTGGCAGGTGGGCTTTTGAAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAGTGGAAGATTGAAAGTGAGGACTGGCAGGTGGGCTTTTGAAAGC  200

seq1  ATGTGGAACTAACCATGTTCAATAAACTCAAGAAAGCATTATGGTCAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAACTAACCATGTTCAATAAACTCAAGAAAGCATTATGGTCAGGC  250

seq1  AGGAACAAAGTGCCCTCGATAGACAGAAAGACCATAGCAGCAGGAAAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAAAGTGCCCTCGATAGACAGAAAGACCATAGCAGCAGGAAAGCT  300

seq1  TTCTCTCTTGCCTTCAGGCAGTAAGACCCTCTCATTTTAAAAGATTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTTGCCTTCAGGCAGTAAGACCCTCTCATTTTAAAAGATTATTT  350

seq1  TATATTTATCATGTGCAGGTATGAGTGTGTGTGTGTGTGTGTGTGTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTATCATGTGCAGGTATGAGTGTGTGTGTGTGTGTGTGTGTGTGT  400

seq1  TTTCCTCATAAGAGTAATACCTTAAGAAAGTATCAGATCCTCTGGGGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCATAAGAGTAATACCTTAAGAAAGTATCAGATCCTCTGGGGCTA  450

seq1  GAGCTACTGATATCTGTGAGCCACCCACATTGGTGCTGGGAACTGTCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTACTGATATCTGTGAGCCACCCACATTGGTGCTGGGAACTGTCTAT  500

seq1  TCCTTGCAATAGAAGCAAACACCCCTTGACCACTCCTCTAGCTCTCTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGCAATAGAAGCAAACACCCCTTGACCACTCCTCTAGCTCTCTCTG  550

seq1  TTTTTTCTTTGATAAAGACTTTTTATTGAAGGTTAGATTTTTCCTTCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTTGATAAAGACTTTTTATTGAAGGTTAGATTTTTCCTTCAAA  600

seq1  AAAAAAAAGCGGTCCCCAAACAAAAAAGAAAACAACCCCCCCAAACAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAGCGGTCCCCAAACAAAAAAGAAAACAACCCCCCCAAACAAAA  650

seq1  ACAAACAAACAAACAAATGAAAACCTATG-TTGCAATGCCAAGCTCTATC  699
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ACAAACAAACAAACAAATGAAAACCTATGTTTGCAATGCCAAGCTCTATC  700

seq1  TGTTATCTGATGAGTTCTGTTTTGCTGAATGGATACCCTAGATTCTTATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATCTGATGAGTTCTGTTTTGCTGAATGGATACCCTAGATTCTTATT  750

seq1  CCCTCACTATGCACAAGGAGATTAAAACCAAGCTTCCTATTTGAGAAGGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCACTATGCACAAGGAGATTAAAACCAAGCTTCCTATTTGAGAAGGA  800

seq1  GCCAAGACATCATTTCTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTT  849
      ||||||||||||||||||||        ||||||||  | ||||||||||
seq2  GCCAAGACATCATTTCTTTT-------CTTTCTTTTCATATTTTTTTTTT  843

seq1  TTTTTTGGTTTCT-TTCAAGACAGGGTTTCTC-TGTGCAGCCCTGGC-TG  896
      |||||||| |||| | |||||||||||||||| |||||||||||||| ||
seq2  TTTTTTGGGTTCTCTACAAGACAGGGTTTCTCTTGTGCAGCCCTGGCTTG  893

seq1  TCCTGGAACT-CAC-TCTGTAG-ACCAGGCTGG-CCTCAAACTC-AGAAA  941
      |||||||||| ||| ||||||| || ||||||| | |||||||| |||||
seq2  TCCTGGAACTACACTTCTGTAGAACTAGGCTGGACTTCAAACTCAAGAAA  943

seq1  TCTGCCTGCCTTGGCCTCCCATC-ATTTCTATAT-CCT-TGATTTACATC  988
      |||||||||||| |||||| ||| |||||||||| ||| |||||||||||
seq2  TCTGCCTGCCTTTGCCTCCAATCAATTTCTATATACCTCTGATTTACATC  993