BAC Information

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BAC

Clone NameB6Ng01-271E19
Chromosome9 (Build37)
Map Location 93,059,919 - 93,061,063
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC331000, Plscr1, Plscr2, 1700057G04Rik, LOC666850, Plscr4, Plod2, LOC100039921, LOC100039931, LOC100039944, LOC667009, LOC100040114
Downstream geneLOC674371, LOC384967
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271E19.bB6Ng01-271E19.g
ACCGA073423GA073424
length1,1951,142
definitionB6Ng01-271E19.b B6Ng01-271E19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattaatccc
ctatctgatttaggataggtaaagatcctttccaaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacaagataacaaccagttgtgctagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctaacctaggttttttgttattccagaca
aatatgcaaattgctccttccaatttgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccaagatattttatattat
ttgtgactattgagaaggtgttctttccctaatttctttctcagctgttt
attcttgtatagaaaaaaggccattgactgtttgagttattttaatatcc
agctaccttcacgaagctgttttatcaggtttagagtccctggtagaatt
ttaaggttcacttatatatacatcatattcatctggcaaaaggaattgac
tccttgccatgatcctgatctccaatgtgtgtgtgccaattcatc

gaattcagtttgtatggaggtacaagttgttctttgaacatgaacgtaaa
tctaactatgattctatttacctgccacacaagtggtcagtttctcagac
atatataatataacatttcttctgaataattatttttgtttgtttgtttg
tttgtttgtttttccagatagggtttctctgtatatagctttggctgtcc
tggaactcactttgtagaccaggctggcctcgaactcagaaattcacctg
cttctgcctcccgagtgctgggattaaaggtgtgcgccatcatgcctggt
ggtctgaataattattggaggaaaccatgttcttttaccactagtaatga
aacagtaattggtaaaagaacagaaagcagttagaagaactcaaaaacct
gtgctattcctccttgctaaaataatgaaacagactttaatatagtatta
tgactgactagaacatttcaatatatggaaaaatataatcaatactttaa
atatttttatttttaaaacataagatctaaatggaagatctaaattttga
tactaaattgaaatattatcagccttttattatatgagggtttaagtaga
aatcagagatgtttgaaaataacccattattaatgtgttggatataaaaa
taatttcctgtttgaaagcagaaatacttgttaaagcaattaaagagttt
ttctacaaaaatgcatttacaaactgcacacacatattttatgagatgag
taatctttctttacaaatgaagaacataaaatatatctactgatttttgg
taaaaacaagctctaaataatattttatctgaccatgctttttctccttt
gtgctttaaaagctctctcgattgttacattcaatttaagatcttagttg
cagtttacaaagaggaaatgtttttcgaaattaataagtattttacattt
gtatattaagaattgatggggttaaaaaatacttggtattttgagaactt
atcctacaagtcaactgatgatgtcatcaggaaatcagtgttcccaactc
acaaaagattaccacattcttgagctaacacattctttcacaggaagaag
gccatggaagattcacagaccctcacttagcatctagtcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_93059919_93061063
seq2: B6Ng01-271E19.g_66_1207

seq1  GAATTCAGTTTGTATGGAGGTACAAGTTGTTCTTTGAACATGAACGTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTGTATGGAGGTACAAGTTGTTCTTTGAACATGAACGTAAA  50

seq1  TCTAACTATGATTCTATTTACCTGCCACACAAGTGGTCAGTTTCTCAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACTATGATTCTATTTACCTGCCACACAAGTGGTCAGTTTCTCAGAC  100

seq1  ATATATAATATAACATTTCTTCTGAATAATTATTTTTGTTTGTTTGTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAATATAACATTTCTTCTGAATAATTATTTTTGTTTGTTTGTTTG  150

seq1  TTTGTTTGTTTTTCCAGATAGGGTTTCTCTGTATATAGCTTTGGCTGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTTTCCAGATAGGGTTTCTCTGTATATAGCTTTGGCTGTCC  200

seq1  TGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATTCACCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATTCACCTG  250

seq1  CTTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCATCATGCCTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTGCGCCATCATGCCTGGT  300

seq1  GGTCTGAATAATTATTGGAGGAAACCATGTTCTTTTACCACTAGTAATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGAATAATTATTGGAGGAAACCATGTTCTTTTACCACTAGTAATGA  350

seq1  AACAGTAATTGGTAAAAGAACAGAAAGCAGTTAGAAGAACTCAAAAACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTAATTGGTAAAAGAACAGAAAGCAGTTAGAAGAACTCAAAAACCT  400

seq1  GTGCTATTCCTCCTTGCTAAAATAATGAAACAGACTTTAATATAGTATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTATTCCTCCTTGCTAAAATAATGAAACAGACTTTAATATAGTATTA  450

seq1  TGACTGACTAGAACATTTCAATATATGGAAAAATATAATCAATACTTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGACTAGAACATTTCAATATATGGAAAAATATAATCAATACTTTAA  500

seq1  ATATTTTTATTTTTAAAACATAAGATCTAAATGGAAGATCTAAATTTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTATTTTTAAAACATAAGATCTAAATGGAAGATCTAAATTTTGA  550

seq1  TACTAAATTGAAATATTATCAGCCTTTTATTATATGAGGGTTTAAGTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAATTGAAATATTATCAGCCTTTTATTATATGAGGGTTTAAGTAGA  600

seq1  AATCAGAGATGTTTGAAAATAACCCATTATTAATGTGTTGGATATAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGAGATGTTTGAAAATAACCCATTATTAATGTGTTGGATATAAAAA  650

seq1  TAATTTCCTGTTTGAAAGCAGAAATACTTGTTAAAGCAATTAAAGAGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCCTGTTTGAAAGCAGAAATACTTGTTAAAGCAATTAAAGAGTTT  700

seq1  TTCTACAAAAATGCATTTACAAACTGCACACACATATTTTATGAGATGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAAAAATGCATTTACAAACTGCACACACATATTTTATGAGATGAG  750

seq1  TAATCTTTCTTTACAAATGAAGAACATAAAATATATCTACTGATTTTTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTTTCTTTACAAATGAAGAACATAAAATATATCTACTGATTTTTGG  800

seq1  TAAAAACAAGCTCTAAATAATATTTTATCTGACCATGCTTTTTCTCCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACAAGCTCTAAATAATATTTTATCTGACCATGCTTTTTCTCCTTT  850

seq1  GTGCTTTAAAAGCTCTCTCGATTGTTACATTCAATTTAAGATCTTAGTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTTAAAAGCTCTCTCGATTGTTACATTCAATTTAAGATCTTAGTTG  900

seq1  CAGTTTACAAAGAGGAAATGTTTTTCGAAATTAATAAGTATTTTAACATT  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CAGTTTACAAAGAGGAAATGTTTTTCGAAATTAATAAGTATTTT-ACATT  949

seq1  TGTATATTAAGAAATTGATGGGGTTAAAAAAATACTTGGTATTTTTGAGA  1000
      ||||||||||| ||||||||||||| ||||||||||||||| ||||||||
seq2  TGTATATTAAG-AATTGATGGGGTT-AAAAAATACTTGGTA-TTTTGAGA  996

seq1  AC-TATCCTACAAGTCAAACTGATGATGTCATCAGGAAATCAGTG-TCCC  1048
      || ||||||||||||| |||||||||||||||||||||||||||| ||||
seq2  ACTTATCCTACAAGTC-AACTGATGATGTCATCAGGAAATCAGTGTTCCC  1045

seq1  AACTCACAAAAGATTACCACAT--CTGAGCTTAACAACATCCTTTCACA-  1095
      ||||||||||||||||||||||   ||||| |||| |||| |||||||| 
seq2  AACTCACAAAAGATTACCACATTCTTGAGC-TAAC-ACATTCTTTCACAG  1093

seq1  GAAGGAGGGCAATGAAGATCACCAGACCCTCATCTTAGCATCTAGTCACT  1145
      |||| ||| ||  ||||||   |||||||||| |||||||||||||||||
seq2  GAAGAAGGCCATGGAAGATTCACAGACCCTCA-CTTAGCATCTAGTCACT  1142


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