BAC Information

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BAC

Clone NameB6Ng01-273K08
Chromosome9 (Build37)
Map Location 13,442,593 - 13,443,777
singlet/doubletsinglet
Overlap geneMaml2
Upstream geneLOC100039680, LOC665285, LOC100039729, LOC100039758
Downstream geneMtmr2, Cep57, 2810485I05Rik, LOC665329, Sesn3, Endod1, LOC665351, EG547035, Jmjd2d, 0610040D20Rik, Amotl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273K08.bB6Ng01-273K08.g
ACCGA075167GA075168
length1,1791,166
definitionB6Ng01-273K08.b B6Ng01-273K08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacatgcttcccactctcttctcacttgggaaccccaatgttgt
gtgtaattgctcctagcagcagcctggctgccctggaggacatgagtttg
aaaggctccccagtcagagggagaagcacttcgccagacaccattgcaag
ctgccctaagactctaactggtcaagcaccaagatctacaactccaaggt
ctagagaggtcaacactcttgcattctcatagcgccataccacttcccat
aaggtttttcattacgtaggtctcacccagtcaagagtgggcctgaaaac
actcccaagtgtcagtgtctatgctggcaaagccagccccctggtcttcc
tgctgagccaccctgtgtagacttgatactataactttgcataaagaatc
gtattgcctccaaggagacctcttaatgacttaattgcatctggctctac
tattctgaatatatggctgaataattgaatataaactagcaatataactc
aagcttctacccaccctctccattcagggtcctctgaaccctcaggtaaa
tgcctaaaaggaagcttgtcccaacaggtaaattcaagtcttaacaacac
aagtagtgcagaagtaactaacagcagactaatcagtgaagacaaaggta
agaaataaagtcagggaccatcatcaagccccctgaagttaaaaagatga
agtccatctcaccctttgcactgatcttacactgtgtgtacctgcagttg
tgaaataaacctacaatctgaattaatcagctattactggcctaagcaat
gtgacttttttttctaggcagggtcagacctttgtcttgatgctccattc
aacctcctaagtgacatgactttatatggtgtattatacacttacatctc
ctaaagaggacatatggtttctctgaaattttctcttcttatttaattaa
agaatagaaatacctcaaacaaatatcttcctttaagagacttttaaaaa
taaagtttaataaaccctattaaaagaaacttgcaataaaaaatacagca
cacaccaaaatagccagatccaaagtcttatacagctatgaacagaagta
gaattggtattccaacataactgtgcagctcttatacaagtccatgttga
tatattttatggcaccttattccaccatt
gaattcactcctagtcactcccattctcggggtgtaatagtggggtgata
ggcaagcaacgaaccaggagctgtcacgccatatcaggtgctgaaacgtc
atgctgcgggttataaaagcagcgccattttcccggttcgggatcttcct
gagaagcaagcaataaagcttttgccgcggaagattctggtttgttgcgt
ctttcttgccggtcgagcgggacgcaataagtggcgccgaagaacccggg
aactgtcatcacaccggcgcaaggaagatccctcgttcgcggggcagaat
cagaaccgtgggacaaaaggctctacaaggtacgtacaatcttgaaattt
ctccagagttagaagcccttttgattgtttgcacggcgattatgaggatt
gtcagcaaatagtagaagcagggcagaaagttctggacgaaattcaagaa
agtctatcagaggtagagcggggagagagagtaaaagtagagaggaaaca
aagtgcactgaagaatttaggcctttccatgggccttgagcccgaggaaa
agagatataaaggaaagaatgccttgggagagattagaaaaagggatgga
aagggagagaagaagggagatcgagctggagaggcacataaggaaaggag
cctctacccgccactggatgaatttaagcagctaactcttagtagttcag
aaccagatgaaggagttagcgcctctgaagaaacagactcggaggaggaa
gcagttcgttataagggagaaaggtaccagcaagataaaatgtaagctac
tcagtccagaaaaaggcaaaaagccgttggcgaaagccagcttgctgctc
ggcctctggactgtcggcttcagggtcctagtgcacctccgctttatgtg
cagaggtactggtcaatttttacctactcctcatgtacgggtaaaccctt
gtggcgtcaggccattacagtctggccaatggatgtcactcatatttcct
ctttgggagaaatcaatatttacaatgtttctatgacacctgctctggtg
taatgttgccacactttaacaagtgaaaaggcttcatgttatacagcact
ggctaggagtgtgatgctgagccagccccagtcctgagaccggataatgg
ggtcagccaattatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_13442593_13443777
seq2: B6Ng01-273K08.b_43_1221

seq1  GAATTCCACATGCTTCCCACTCTCTTCTCACTTGGGAACCCCAATGTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATGCTTCCCACTCTCTTCTCACTTGGGAACCCCAATGTTGT  50

seq1  GTGTAATTGCTCCTAGCAGCAGCCTGGCTGCCCTGGAGGACATGAGTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATTGCTCCTAGCAGCAGCCTGGCTGCCCTGGAGGACATGAGTTTG  100

seq1  AAAGGCTCCCCAGTCAGAGGGAGAAGCACTTCGCCAGACACCATTGCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTCCCCAGTCAGAGGGAGAAGCACTTCGCCAGACACCATTGCAAG  150

seq1  CTGCCCTAAGACTCTAACTGGTCAAGCACCAAGATCTACAACTCCAAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTAAGACTCTAACTGGTCAAGCACCAAGATCTACAACTCCAAGGT  200

seq1  CTAGAGAGGTCAACACTCTTGCATTCTCATAGCGCCATACCACTTCCCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGAGGTCAACACTCTTGCATTCTCATAGCGCCATACCACTTCCCAT  250

seq1  AAGGTTTTTCATTACGTAGGTCTCACCCAGTCAAGAGTGGGCCTGAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTTTCATTACGTAGGTCTCACCCAGTCAAGAGTGGGCCTGAAAAC  300

seq1  ACTCCCAAGTGTCAGTGTCTATGCTGGCAAAGCCAGCCCCCTGGTCTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCAAGTGTCAGTGTCTATGCTGGCAAAGCCAGCCCCCTGGTCTTCC  350

seq1  TGCTGAGCCACCCTGTGTAGACTTGATACTATAACTTTGCATAAAGAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGCCACCCTGTGTAGACTTGATACTATAACTTTGCATAAAGAATC  400

seq1  GTATTGCCTCCAAGGAGACCTCTTAATGACTTAATTGCATCTGGCTCTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGCCTCCAAGGAGACCTCTTAATGACTTAATTGCATCTGGCTCTAC  450

seq1  TATTCTGAATATATGGCTGAATAATTGAATATAAACTAGCAATATAACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGAATATATGGCTGAATAATTGAATATAAACTAGCAATATAACTC  500

seq1  AAGCTTCTACCCACCCTCTCCATTCAGGGTCCTCTGAACCCTCAGGTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCTACCCACCCTCTCCATTCAGGGTCCTCTGAACCCTCAGGTAAA  550

seq1  TGCCTAAAAGGAAGCTTGTCCCAACAGGTAAATTCAAGTCTTAACAACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAAAAGGAAGCTTGTCCCAACAGGTAAATTCAAGTCTTAACAACAC  600

seq1  AAGTAGTGCAGAAGTAACTAACAGCAGACTAATCAGTGAAGACAAAGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGTGCAGAAGTAACTAACAGCAGACTAATCAGTGAAGACAAAGGTA  650

seq1  AGAAATAAAGTCAGGGACCATCATCAAGCCCCCTGAAGTTAAAAAGATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAAAGTCAGGGACCATCATCAAGCCCCCTGAAGTTAAAAAGATGA  700

seq1  AGTCCATCTCACCCTTTGCACTGATCTTACACTGTGTGTACCTGCAGTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCATCTCACCCTTTGCACTGATCTTACACTGTGTGTACCTGCAGTTG  750

seq1  TGAAATAAACCTACAATCTGAATTAATCAGCTATTACTGGCCTAAGCAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAAACCTACAATCTGAATTAATCAGCTATTACTGGCCTAAGCAAT  800

seq1  GTGAC-TTTTTTTCTAGGCAGGGTCAGACCTTTGTCTTGATGCTCCATTC  849
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTTTTTTTTCTAGGCAGGGTCAGACCTTTGTCTTGATGCTCCATTC  850

seq1  AACCTCCTAAGTGACATGACTTTATATGGTGTATTATACACTTACATCTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCCTAAGTGACATGACTTTATATGGTGTATTATACACTTACATCTC  900

seq1  CTAAAGAGGACATATGGTTTCTCTGAAATTTTCTCTTCTTATTTAATTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGAGGACATATGGTTTCTCTGAAATTTTCTCTTCTTATTTAATTAA  950

seq1  AGAATAGAAATACCTCAAACAAATATCTTCCTTAAAGAGACTTTT-AAAA  998
      ||||||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  AGAATAGAAATACCTCAAACAAATATCTTCCTTTAAGAGACTTTTAAAAA  1000

seq1  TAAAGTTTAATAAACCTTATTAAAAGAAACTTGCAAATAAAAAATAACAG  1048
      |||||||||||||||| ||||||||||||||||| |||||||||| ||||
seq2  TAAAGTTTAATAAACCCTATTAAAAGAAACTTGC-AATAAAAAAT-ACAG  1048

seq1  CACACACCAAAATTAGCCAGATCCAAAGTC-TATACAGCTTAATGAACAG  1097
      |||||||||||| ||||||||||||||||| |||||||||  ||||||||
seq2  CACACACCAAAA-TAGCCAGATCCAAAGTCTTATACAGCT--ATGAACAG  1095

seq1  AGTTAGAATTGGTATTCAAAACATAAACTGTGAAGCTTCTTATTACAAAT  1147
      |  ||||||||||||||  ||||| ||||||| ||| ||||| |||||  
seq2  AAGTAGAATTGGTATTC-CAACAT-AACTGTGCAGC-TCTTA-TACAA--  1139

seq1  TTCAGTGTTGAGTATATTTTAT-GCA-CTTA-TCCACCATT  1185
       ||  |||||| |||||||||| ||| |||| |||||||||
seq2  GTCCATGTTGA-TATATTTTATGGCACCTTATTCCACCATT  1179