BAC Information

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BAC

Clone NameB6Ng01-273M15
Chromosome9 (Build37)
Map Location 32,797,048 - 32,798,235
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666619, LOC666622, Grit, Kcnj5, Kcnj1, Fli1, LOC669759, LOC100041398, Ets1, LOC100041426
Downstream geneLOC100042343
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273M15.bB6Ng01-273M15.g
ACCGA075269GA075270
length1,1821,166
definitionB6Ng01-273M15.b B6Ng01-273M15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatatgcatgatgcattaagaaatgctactttcatcatttcactg
atcactgtggtttgtatgtgtcttaaagttcatatgttggagtataaatt
ccccagtgatgcagaattgagaagcagggtttagtgggagatgctttgac
catgaggagctctatgttcaccagtaaactaaagccattccgagggtatg
ggtaaattctcatggaagtgattttgcttctaaacccagttcttccaggg
agctttgcccttctgtgtttctaccacaagataacattgagcccaaaagc
tctggccagacactggtaccctcggatttctcgcctctagaatcatgaac
ctaataaccattctttacagattacaggctgtggtattattctattaagg
caacagaaagcactctgcaacagtggatctgcatacacattgaatgttct
taaattgcattaagactggttttgcataatatacagctgaatgggaaaat
ttgataatttacagttttaacccagatggtattgtatagcaaataaaaca
ccctcacaagagagaccaagtaagacagaacaaggatttaaatgtgaata
tcttatggagattttaccacaactactgggataagggattctcagtattc
attctgaatagtgcctgtaacttatttccttgtctccctggctttgaatg
acagagtcccaagctgaatcttaccactgcagggcttgtacccagcagtg
agtatgtgtatttacatccttggagcaaatgtgatgaaagcaaggtagac
tttaagaggaatttctctatgtgtaatcagatgatttctaggaaacaagt
tacagtctgaataaagagtcagtgacatctctcccatctgactggaacct
atgatgcatgtgacaacatgtctgcccacagtgaccagcacctaagatgt
atgtgctggaatattcacttgagcaatggactcttctttggggctgggcc
tccaatttgtatcttttatatcccatgttcctttgatgatgctatggatc
caggtacagggaattctacatggatattttctaatacctttttctctcta
taccctctctagctgattctgagtgatcaatgttacctgggtcttgcaaa
tgaggcatggccatatggaatggactgatgac
gaattcagaacttttcagctggggaacgagagtaccagtgagtatgtttg
gccttgaattttttctggtgttaggagcccttttgttctttttcacatgc
tatcaagtgattaagatagggctgaaaattctagaggaaattcaggacaa
tctatcagaagtaaagcggggagagagagtaggaacaaagaggaagtatg
gtacacaaaataagtatacaggcctttccaagggtcttgaacccgaggaa
aagttaaggttaggtaggaatacctggagagagattagaagaaaaagagg
aaaaagggagaagaaaaaagatcgattagcggaggtctctaggagatact
cgtcactagatgagctcggggagccagctcttagtaactctgaagcaggt
gaagaatcctcctctgaggaaacagactgggaggaagaagcagcccatta
ccagccagctaattggtcaagaaaaaagccaaaagcggctggcgaaagtc
agcgtactgttcaacctcccggcagtcggtttcaaggtccgccctatgcg
gagcccccgccctgcgtagtgcgtcagcaatgcgcagagaggcaatgcgc
agagagatgcgcagagaggcagtgcgcagagagatgcgcagagaggcagt
gcgcagagaggcagtgcgcagagaggcagtgcgcagactcattcattccc
ggagaggaacaaaagaaaatacaacaggcatttccagtctttgaaggagc
cgagggtgggcgtgtccacgctccggtagaatacgtacagattaaggaaa
ttgccgagtcggttcgtaaatacggaaccaatgctaattttaccttggtg
cagttagacaggctcgctggcatggcactaactcctgccgactggcaacg
gttgtaaaagccgctctccctagtatggcaaatatatgggaatggaagcg
ctttggcacgagctgcacaggcgcaggcccgagcaacgcagctgcttgac
tcagagcagagagattggacttttgactgttacggtcagcagcttattct
gctgatcagacaactaccaattggggagcttatggccagatttcttcacg
cctataggtctgaggccctctctcggcagggtgaacacactgggtccgag
gtttacctgaagaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_32797048_32798235
seq2: B6Ng01-273M15.b_44_1225

seq1  GAATTCATATGCATGATGCATTAAGAAATGCTACTTTCATCATTTCACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATGCATGATGCATTAAGAAATGCTACTTTCATCATTTCACTG  50

seq1  ATCACTGTGGTTTGTATGTGTCTTAAAGTTCATATGTTGGAGTATAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGTGGTTTGTATGTGTCTTAAAGTTCATATGTTGGAGTATAAATT  100

seq1  CCCCAGTGATGCAGAATTGAGAAGCAGGGTTTAGTGGGAGATGCTTTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTGATGCAGAATTGAGAAGCAGGGTTTAGTGGGAGATGCTTTGAC  150

seq1  CATGAGGAGCTCTATGTTCACCAGTAAACTAAAGCCATTCCGAGGGTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGGAGCTCTATGTTCACCAGTAAACTAAAGCCATTCCGAGGGTATG  200

seq1  GGTAAATTCTCATGGAAGTGATTTTGCTTCTAAACCCAGTTCTTCCAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATTCTCATGGAAGTGATTTTGCTTCTAAACCCAGTTCTTCCAGGG  250

seq1  AGCTTTGCCCTTCTGTGTTTCTACCACAAGATAACATTGAGCCCAAAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGCCCTTCTGTGTTTCTACCACAAGATAACATTGAGCCCAAAAGC  300

seq1  TCTGGCCAGACACTGGTACCCTCGGATTTCTCGCCTCTAGAATCATGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCCAGACACTGGTACCCTCGGATTTCTCGCCTCTAGAATCATGAAC  350

seq1  CTAATAACCATTCTTTACAGATTACAGGCTGTGGTATTATTCTATTAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAACCATTCTTTACAGATTACAGGCTGTGGTATTATTCTATTAAGG  400

seq1  CAACAGAAAGCACTCTGCAACAGTGGATCTGCATACACATTGAATGTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAAAGCACTCTGCAACAGTGGATCTGCATACACATTGAATGTTCT  450

seq1  TAAATTGCATTAAGACTGGTTTTGCATAATATACAGCTGAATGGGAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGCATTAAGACTGGTTTTGCATAATATACAGCTGAATGGGAAAAT  500

seq1  TTGATAATTTACAGTTTTAACCCAGATGGTATTGTATAGCAAATAAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAATTTACAGTTTTAACCCAGATGGTATTGTATAGCAAATAAAACA  550

seq1  CCCTCACAAGAGAGACCAAGTAAGACAGAACAAGGATTTAAATGTGAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCACAAGAGAGACCAAGTAAGACAGAACAAGGATTTAAATGTGAATA  600

seq1  TCTTATGGAGATTTTACCACAACTACTGGGATAAGGGATTCTCAGTATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGGAGATTTTACCACAACTACTGGGATAAGGGATTCTCAGTATTC  650

seq1  ATTCTGAATAGTGCCTGTAACTTATTTCCTTGTCTCCCTGGCTTTGAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAATAGTGCCTGTAACTTATTTCCTTGTCTCCCTGGCTTTGAATG  700

seq1  ACAGAGTCCCAAGCTGAATCTTACCACTGCAGGGCTTGTACCCAGCAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTCCCAAGCTGAATCTTACCACTGCAGGGCTTGTACCCAGCAGTG  750

seq1  AGTATGTGTATTTACATCCTTGGAGCAAATGTGATGAAAGCAAGGTAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTGTATTTACATCCTTGGAGCAAATGTGATGAAAGCAAGGTAGAC  800

seq1  TTTAAGAGGAATTTCTCTATGTGTAATCAGATGATTTCTAGGAAACAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGAGGAATTTCTCTATGTGTAATCAGATGATTTCTAGGAAACAAGT  850

seq1  TACAGTCTGAATAAAGAGTCAGTGACATCTCTCCCATCTGACTGGAACCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTCTGAATAAAGAGTCAGTGACATCTCTCCCATCTGACTGGAACCT  900

seq1  ATGATGCATGTGACAACATGTCTGCCCACAGTGACCAGCACCTAAGATGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGCATGTGACAACATGTCTGCCCACAGTGACCAGCACCTAAGATGT  950

seq1  ATGTGCTGGAATATTCACTTGAGCAATGGACTCTTCTTTGGGGCT-GGCC  999
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATGTGCTGGAATATTCACTTGAGCAATGGACTCTTCTTTGGGGCTGGGCC  1000

seq1  TCCAATTTGTATCTTTTATTATCCCATGTTCCTTTGATTGATGGCTAT-G  1048
      |||||||||||||||||| |||||||||||||||||| |||| ||||| |
seq2  TCCAATTTGTATCTTTTA-TATCCCATGTTCCTTTGA-TGAT-GCTATGG  1047

seq1  ATCCAGGTACAGGGAATTCTACATGGTATA-TTTCTAATTACTTT---TC  1094
      |||||||||||||||||||||||||| ||| ||||||||  ||||   ||
seq2  ATCCAGGTACAGGGAATTCTACATGG-ATATTTTCTAATACCTTTTTCTC  1096

seq1  TCTATACCCT-TCTAAGCTGATTTCCTGAGTGGATC-ATGTTACTGGGGT  1142
      |||||||||| ||| ||||||||  |||||| |||| |||||||  ||||
seq2  TCTATACCCTCTCT-AGCTGATT--CTGAGT-GATCAATGTTACCTGGGT  1142

seq1  CTTGCAGATGGAAAGCATGGCATTATTGGAATGGAGCTTGGATGAC  1188
      |||||| |||  | |||||||  || ||||||||| ||  ||||||
seq2  CTTGCAAATG--AGGCATGGCCATA-TGGAATGGA-CT--GATGAC  1182