BAC Information

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BAC

Clone NameB6Ng01-274K10
Chromosome9 (Build37)
Map Location 58,645,725 - 58,646,811
singlet/doubletsinglet
Overlap genenone
Upstream geneArid3b, LOC665235, LOC677423, LOC100039509, Ubl7, Sema7a, Cyp11a1, 4930535E21Rik, Stra6, Islr, Islr2, LOC665268, Pml, Stoml1, Loxl1, Tbc1d21, 6030419C18Rik, Cd276, Nptn, 2410076I21Rik
Downstream geneHcn4, Neo1, LOC100040186, EG665330, Adpgk, Bbs4, Arih1, LOC621119, 4930425N13Rik, Hexa, Brunol6, Parp6, Pkm2, 4933407I18Rik, Gramd2, Senp8, Myo9a, EG665385
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274K10.bB6Ng01-274K10.g
ACCGA075898GA075899
length1,2111,087
definitionB6Ng01-274K10.b B6Ng01-274K10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tctgtttagatctgtactccattttttaattgaattatttggtttgttca
tgtctaatttcttgagttctttatatatatattctggaaattagcatggt
catctcattagatgttgaaaagcctttgacaaaatctaacactcttatat
gataaaaaccttggagagattagggatacaagagacacacttaaacataa
taaaggcactatatagcaagccaatagtcatcattaaattaaatggaaag
aaactcaaagcaatttcactaaaatcatgaataagacaggctgtttactc
tttccatagctattcaatatagtacttgaaatactagctagagtaataag
acaattgaaggaggatcaaggggatacaaattggaaaggaagaagggctg
aagatggctcattggttaagagcactgagctcaatttccagcatccatat
ggtggcttacatccatctataatgggatcccatgtcctctgctggtatgt
ctgaggacagtgacatgcactcacatacataaataaaatcttttttaaaa
aattaggaagaagtcaaagtatcactatttgcagatgatatgatattata
cataagaaaccccaaaaattctaccagggaatttctacagctgataaaca
ccttcagcaaagtggctggatacaagattaactaaaagaatttagtagcc
tttctatatacaaaagataaatggtcaagagaaaaaaaattaagcaatac
ccttcacaatagccacaaataatgtaaaatatcttgatttgactttaacc
aagaaaatgaaagacctgtatgaaaataatttcaagtctttgaagaaaga
aaattgaagaagacatcagaaggtggaaagatttcccatgctcatggatt
gggtagggattaacatagtgaaaatggcccattttaccaagagtaatcta
cagacttaataacaatccccatcaaaattccacacaatttttttaaaaaa
agattttatttttattttcatgtatgtgagttaccactgttagttgttcg
tcaggacacacagagaaggccatttggcatgcccgtttacggatggtgga
gaactcaccgatgtgtttgctgggatgaactctcagggcctctggaaaga
cagtcagttctcttaacgattgagcatctctttcagtctctcctacataa
aatctgtttca
gaattccagccagcaggaacccctaacacaaaacctgttgggccccattc
attcaccctgcaacaggaaccagtcctcagctgcatctccagaaggtcag
cagagcagtttgcagagtcgcagggcccaggtctctcatagatcctcact
gaggtcagagacacctctagaaagcagccaggccccagaagggctgtcca
ggagctctgcagtctggttagcagccattgtcttccttctgagtaggaag
tgctttgtagaaaggaggatcatgagtttgaggccagtctcaaaagcaaa
caaaaaagatatgtttttccacaggtccctggtcattgtctccccatcct
ttcctcctttcttccctccctaatcttctctgttcactctgaggatccct
gcctagtgttggcctcctggggaaggtgcagtagttttcagagggattct
ctgaaattaaggaggaacagggttgtccctggctctgacactggcacgtt
tagtagcactaactcccaccctacctctttggctttagtttggggtaccg
ggagtcagcctagaaaattggcatctgaccctgctctgcagctctgggac
cagctgcttcaagcctgcgaggtctacactgtgtcaccttcaagcacctg
gaacccttccagttggctccactgcctcacctctctggaacatgcagaac
atctcttccacatgaagcagtgctagaggaagggccgatagactccgtct
cttgtcaccaagagacaaaaccccgttcatacggaaccctagtacagaac
aggacagggagggtagacatagggggactagtctgttgtttgtgggcaga
taggcatctaatactgcagacatctcccagccagaagagaggtacatcgc
agaatgctggacctcaggagcacttgcagaggggggacatttggtctata
aaactactcttgtgtttcagacagtggattacaaatcctgccagatttat
agaagggggaggggccaaagcagtcagacattgtggagctcagcttgccc
tctgctcagtgtcagccacttcttttgagtgttgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_58645725_58646811
seq2: B6Ng01-274K10.g_70_1156 (reverse)

seq1  CAACAACTACAAAAAGAAGTGGCTGACCACCTGAGCAGAGGGGCAAGCCT  50
      |||||||    ||||||||||||||||   ||||||||| ||||||| ||
seq2  CAACAACACTCAAAAGAAGTGGCTGAC--ACTGAGCAGA-GGGCAAG-CT  46

seq1  GAGCTCCACAATGTCTGACTGCTTTGGCCCCTCCCCC-TCTAT-AATCTG  98
      ||||||||||||||||||||||||||||||||||||| ||||| ||||||
seq2  GAGCTCCACAATGTCTGACTGCTTTGGCCCCTCCCCCTTCTATAAATCTG  96

seq1  GCAGGATTTGTTAATCCACTGTCTG-AACAC-AGAGTAGTTTTATAGACC  146
      |||||||||| |||||||||||||| ||||| ||||||||||||||||||
seq2  GCAGGATTTG-TAATCCACTGTCTGAAACACAAGAGTAGTTTTATAGACC  145

seq1  AAATGT-CCCCCTCTGCAAGTGCTCCTGAGGTCCAGCATTCTGCGATGTA  195
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCCCCCCTCTGCAAGTGCTCCTGAGGTCCAGCATTCTGCGATGTA  195

seq1  CCTCTCTTCTGGCTGGGAGATGTCTGCAGTATTAGATGCCTATCTGCCCA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTTCTGGCTGGGAGATGTCTGCAGTATTAGATGCCTATCTGCCCA  245

seq1  CAAACAACAGACTAGTCCCCCTATGTCTACCCTCCCTGTCCTGTTCTGTA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAACAGACTAGTCCCCCTATGTCTACCCTCCCTGTCCTGTTCTGTA  295

seq1  CTAGGGTTCCGTATGAACGGGGTTTTGTCTCTTGGTGACAAGAGACGGAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGTTCCGTATGAACGGGGTTTTGTCTCTTGGTGACAAGAGACGGAG  345

seq1  TCTATCGGCCCTTCCTCTAGCACTGCTTCATGTGGAAGAGATGTTCTGCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCGGCCCTTCCTCTAGCACTGCTTCATGTGGAAGAGATGTTCTGCA  395

seq1  TGTTCCAGAGAGGTGAGGCAGTGGAGCCAACTGGAAGGGTTCCAGGTGCT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCAGAGAGGTGAGGCAGTGGAGCCAACTGGAAGGGTTCCAGGTGCT  445

seq1  TGAAGGTGACACAGTGTAGACCTCGCAGGCTTGAAGCAGCTGGTCCCAGA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTGACACAGTGTAGACCTCGCAGGCTTGAAGCAGCTGGTCCCAGA  495

seq1  GCTGCAGAGCAGGGTCAGATGCCAATTTTCTAGGCTGACTCCCGGTACCC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGAGCAGGGTCAGATGCCAATTTTCTAGGCTGACTCCCGGTACCC  545

seq1  CAAACTAAAGCCAAAGAGGTAGGGTGGGAGTTAGTGCTACTAAACGTGCC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTAAAGCCAAAGAGGTAGGGTGGGAGTTAGTGCTACTAAACGTGCC  595

seq1  AGTGTCAGAGCCAGGGACAACCCTGTTCCTCCTTAATTTCAGAGAATCCC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCAGAGCCAGGGACAACCCTGTTCCTCCTTAATTTCAGAGAATCCC  645

seq1  TCTGAAAACTACTGCACCTTCCCCAGGAGGCCAACACTAGGCAGGGATCC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAACTACTGCACCTTCCCCAGGAGGCCAACACTAGGCAGGGATCC  695

seq1  TCAGAGTGAACAGAGAAGATTAGGGAGGGAAGAAAGGAGGAAAGGATGGG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTGAACAGAGAAGATTAGGGAGGGAAGAAAGGAGGAAAGGATGGG  745

seq1  GAGACAATGACCAGGGACCTGTGGAAAAACATATCTTTTTTGTTTGCTTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAATGACCAGGGACCTGTGGAAAAACATATCTTTTTTGTTTGCTTT  795

seq1  TGAGACTGGCCTCAAACTCATGATCCTCCTTTCTACAAAGCACTTCCTAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTGGCCTCAAACTCATGATCCTCCTTTCTACAAAGCACTTCCTAC  845

seq1  TCAGAAGGAAGACAATGGCTGCTAACCAGACTGCAGAGCTCCTGGACAGC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGGAAGACAATGGCTGCTAACCAGACTGCAGAGCTCCTGGACAGC  895

seq1  CCTTCTGGGGCCTGGCTGCTTTCTAGAGGTGTCTCTGACCTCAGTGAGGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGGGGCCTGGCTGCTTTCTAGAGGTGTCTCTGACCTCAGTGAGGA  945

seq1  TCTATGAGAGACCTGGGCCCTGCGACTCTGCAAACTGCTCTGCTGACCTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGAGAGACCTGGGCCCTGCGACTCTGCAAACTGCTCTGCTGACCTT  995

seq1  CTGGAGATGCAGCTGAGGACTGGTTCCTGTTGCAGGGTGAATGAATGGGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGATGCAGCTGAGGACTGGTTCCTGTTGCAGGGTGAATGAATGGGG  1045

seq1  CCCAACAGGTTTTGTGTTAGGGGTTCCTGCTGGCTGGAATTC  1087
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACAGGTTTTGTGTTAGGGGTTCCTGCTGGCTGGAATTC  1087