BAC Information

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BAC

Clone NameB6Ng01-277B10
Chromosome9 (Build37)
Map Location 10,985,121 - 10,986,278
singlet/doubletsinglet
Overlap genenone
Upstream geneCntn5, LOC665154, LOC100039970, LOC665178
Downstream geneLOC100039989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277B10.bB6Ng01-277B10.g
ACCGA077700GA077701
length9231,165
definitionB6Ng01-277B10.b B6Ng01-277B10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccatatgtctgagaaacacctgaaaaaaat
gttcaacatccttaatcatcagtgaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagataaaaaactcaggtgacat
cagaggctggtgaggatgtggagaaagaggaacagtccttgattgctggt
gggattgcaagctggtacaaccactctggaaattcgtctggcagttcctc
agaaaattggacatagtactaccagaggatccagcaatatctctcctggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaagagaggaatggatacaaaaattgtggtacatttacacaat
ggagtactactcagctgtttttattttgatgctaactctgcttcatcaag
aggggttgcccctccatccctcatgagtagtggattatgtactcagctga
ttttatatgacctttcttcccattttaccttgtcaaataaaggctaaagc
cagtgcttaggtagtaggagagaaatgtaggactggaagttttagagagg
taaagaggaagaaggaggagacaaggagatgaaggagacagaggaagagg
aggtagaaagaagatagagcagatccacatggcctggagaagccacaggt
aacaagggatctcatagctggggaatagggtagtgtagtggtatatctgc
ccaatcaaggtgtatagcttagaaatactataattaggttgggtgttctt
tgcataaggcttattggggctggagatttactgaaacgggagtcttgggt
tgatatccttgaacaagttattt

gaattccatacttaaagttattgccttgctttttttctctttcaccaaca
taagcctgcttagtataactaatcagtccaagtgttggcttttagaaatc
atccactgaagtcatgtaatgaatatattgttcagttcattttgtctgct
gagataaatacaaagtttaatttaaaaacaatcttactaagcttgcctgc
atttctggcaggcagatattggtactggaaggttctgaagctgcacaaat
gagaaacaacacaggagttatgactcgcctgttacagtgtaaaggggaga
aatcacaaacctttcatttgaatgtttattgtcatatattgagattattt
tctcatgataaaatccaaagggaaaggacatcacattacaattctttctt
tgcacaaatgcaattgtgagcttcagatagaaaaatatgtgggcctctta
ttgtcagaagaaattagttcaaataggataattggtatctctatttaagc
agaattttaattagctaataaacattggcatatcctctcctgtactgaat
gttttgagactctattcttactctacaatcagaggattattattagtttt
tatcataagcatggagtctttctttctttctttctttctttctttctttc
tttctttttaagaaagtcattcgtgtagatgagtctatcttcatattgac
tttgtaaccaggagtaatcatgaacttctgatcctcccacttctaccttc
tgagtattgggaatagcctgtgtgccaccacaccctgttttatactatag
ttggttatttaaccagggttacatttttactatgcaagtattcaattaac
taaagtatcatgagtctgtatattaagtacttgggtttcaaataaaaata
tattatgagagatgaattcttttgaacttattctacaagtctagcatcac
tctgattttaaaaaaagaaaaaacaacaacaaaaaaccaaaggcaaaaaa
taaacaggatacactacctcaaaaaaggctgtaatcgaatatcctggaat
actaaataaaaatattcctcaaccaaatacctggaaatattaggttagga
ggtaacacttctcctgggtttactggtggcagggagttaaccattaatat
ggaattatttgaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_10985121_10986278
seq2: B6Ng01-277B10.g_63_1227

seq1  GAATTCCATACTTAAAGTTATTGCCTTGCTTTTTTTCTCTTTCACCAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATACTTAAAGTTATTGCCTTGCTTTTTTTCTCTTTCACCAACA  50

seq1  TAAGCCTGCTTAGTATAACTAATCAGTCCAAGTGTTGGCTTTTAGAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCTGCTTAGTATAACTAATCAGTCCAAGTGTTGGCTTTTAGAAATC  100

seq1  ATCCACTGAAGTCATGTAATGAATATATTGTTCAGTTCATTTTGTCTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTGAAGTCATGTAATGAATATATTGTTCAGTTCATTTTGTCTGCT  150

seq1  GAGATAAATACAAAGTTTAATTTAAAAACAATCTTACTAAGCTTGCCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAAATACAAAGTTTAATTTAAAAACAATCTTACTAAGCTTGCCTGC  200

seq1  ATTTCTGGCAGGCAGATATTGGTACTGGAAGGTTCTGAAGCTGCACAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGGCAGGCAGATATTGGTACTGGAAGGTTCTGAAGCTGCACAAAT  250

seq1  GAGAAACAACACAGGAGTTATGACTCGCCTGTTACAGTGTAAAGGGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACAACACAGGAGTTATGACTCGCCTGTTACAGTGTAAAGGGGAGA  300

seq1  AATCACAAACCTTTCATTTGAATGTTTATTGTCATATATTGAGATTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAAACCTTTCATTTGAATGTTTATTGTCATATATTGAGATTATTT  350

seq1  TCTCATGATAAAATCCAAAGGGAAAGGACATCACATTACAATTCTTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGATAAAATCCAAAGGGAAAGGACATCACATTACAATTCTTTCTT  400

seq1  TGCACAAATGCAATTGTGAGCTTCAGATAGAAAAATATGTGGGCCTCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAAATGCAATTGTGAGCTTCAGATAGAAAAATATGTGGGCCTCTTA  450

seq1  TTGTCAGAAGAAATTAGTTCAAATAGGATAATTGGTATCTCTATTTAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGAAGAAATTAGTTCAAATAGGATAATTGGTATCTCTATTTAAGC  500

seq1  AGAATTTTAATTAGCTAATAAACATTGGCATATCCTCTCCTGTACTGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTTAATTAGCTAATAAACATTGGCATATCCTCTCCTGTACTGAAT  550

seq1  GTTTTGAGACTCTATTCTTACTCTACAATCAGAGGATTATTATTAGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAGACTCTATTCTTACTCTACAATCAGAGGATTATTATTAGTTTT  600

seq1  TATCATAAGCATGGAGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATAAGCATGGAGTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  650

seq1  TTTCTTTTTAAGAAAGTCATTCGTGTAGATGAGTCTATCTTCATATTGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTAAGAAAGTCATTCGTGTAGATGAGTCTATCTTCATATTGAC  700

seq1  TTTGTAACCAGGAGTAATCATGAACTTCTGATCCTCCCACTTCTACCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAACCAGGAGTAATCATGAACTTCTGATCCTCCCACTTCTACCTTC  750

seq1  TGAGTATTGGGAATAGCCTGTGTGCCACCACACCCTGTTTTATACTATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATTGGGAATAGCCTGTGTGCCACCACACCCTGTTTTATACTATAG  800

seq1  TTGGTTATTTAACCAGGGTTACATTTTTACTATGCAAGTATTCAATTAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTATTTAACCAGGGTTACATTTTTACTATGCAAGTATTCAATTAAC  850

seq1  TAAAGTATCATGAGTCTGTATATTAAGTACTTGGTTTTCAAATAAAAATA  900
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TAAAGTATCATGAGTCTGTATATTAAGTACTTGGGTTTCAAATAAAAATA  900

seq1  TATTATGAGAGATGAATTCTTTTGAACTTATTCTACAAGTCTAGCATCAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATGAGAGATGAATTCTTTTGAACTTATTCTACAAGTCTAGCATCAC  950

seq1  TCTGATTTTAAAAAAAAGAAAAAACAAACAAACAAAAAACCAAAAGCAAA  1000
      ||||||||| |||||||||||||||||   |||||||||||||| |||||
seq2  TCTGATTTT-AAAAAAAGAAAAAACAA--CAACAAAAAACCAAAGGCAAA  997

seq1  AAATAAAACAGATAACACTACCTCAAAAAAAGCTGTAATCGAATTATCTT  1050
      |||| ||||||   |||||||||||||||| |||||||||||| |||| |
seq2  AAAT-AAACAGGATACACTACCTCAAAAAAGGCTGTAATCGAA-TATCCT  1045

seq1  GATTAACTAAAT-AAAATATT-CTCAACAAAATAC--TGAAATA-TAGGT  1095
      |    ||||||| |||||||| |||||| ||||||   |||||| |||||
seq2  GGAATACTAAATAAAAATATTCCTCAACCAAATACCTGGAAATATTAGGT  1095

seq1  AAG--AGTAACACCTTCTCCTTGGTGTACT-GTGGCA-GGAGTTAAACAT  1141
       ||   |||||| |||||||| ||| |||| |||||| |||||||| |||
seq2  TAGGAGGTAACA-CTTCTCCTGGGTTTACTGGTGGCAGGGAGTTAACCAT  1144

seq1  T-ATAT-GAAT--ATTGAAAA  1158
      | |||| ||||   |||||||
seq2  TAATATGGAATTATTTGAAAA  1165


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