BAC Information

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BAC

Clone NameB6Ng01-277L08
Chromosome9 (Build37)
Map Location 38,634,819 - 38,635,978
singlet/doubletsinglet
Overlap geneOlfr923
Upstream geneOlfr877, Olfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922
Downstream geneOlfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933, Olfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1, Olfr950-ps1, Olfr951, Olfr952, Olfr953-ps1, Olfr954, Olfr955, Olfr956-ps1, Olfr44, Olfr957, Olfr958, Olfr959, AW551984, Olfr148, Olfr960, Olfr961, GA_x5J8B7W60AJ-4787-4010, Olfr963, Olfr964-ps1, Olfr149, Olfr965, Olfr966-ps1, Olfr150, Olfr967, Olfr968, Olfr969, Olfr970
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277L08.bB6Ng01-277L08.g
ACCGA078151GA078152
length1,155563
definitionB6Ng01-277L08.b B6Ng01-277L08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttatgaattctgagtatgagtgtccctgtcgcaagatttgct
gggatagtgtagcatagaaaatgtcttgggaaaattattccccacttcat
aagatgaacccccagtatcttaagcttacctagatgagagatctactcaa
tgggtttctcagtaatttaccatgggcaaggtacattgtgtttatgataa
cacaatttttagccacttctgaaatgtgcacagttgcctcttttaaaaac
atgggaattgtacctgcaaagccactaatatctgaaatagaaaaacaggc
aacctgagataatcacacactgcaaggaatttcttcaaactagatgatct
gcaaaccatataaggatcttttagggaacaacagagttcagagcatggat
gggaaatttcttaggtaagttcaatattgtgttaattatttcttttttta
cctgtgtagatgaagatctacagaagaatgacacatggaaattactccct
ggtgacagaatttatcctggagggcttaactaatcggccagaactccaaa
tgcctctgttttttctgtttctaggaatctatgtggttactatagtggca
aatctgggcttaattacactgatttcattgaatacacaccttcacacacc
catgtattatttcctctttaacctgtcatttgtagatatttgttactctt
ctgtctttacccccaaaatgctaattaattttgtagtagagaagaacacc
atctcctatacaggctgcttgactcaactctacttcttctgctttttcgt
cattacagaatgttatctactgactgcaatggcatatgaccgttatgttg
ctatttgcaagccactgctatataatgttatattatccccccggatctgt
gctgtgttcgtgtttggggcatatgtgatgggatgctggggatccctggg
ccatacacttgcatggcaagactgaccttctgtgatgccaaccttgtcaa
tcattatctgtgtgacatcctcccttgtgctcagcttcctgcacagcact
tacaacaatgaggtgtggtctttgttctgatgcatgaacatgtgggtgtt
ctaccagtaccactttttatctctattggtttcatcattgctaactctta
cgcat
tttgtttagctctgtaaaatatagggttatttgattctctggagtctaac
ttcttgagttctttggatatgttggatattatccttctatcagatgtagg
attggtaaagatccttttccaatctgttggttgttttgccctattgacag
tatcctttatcttatagaagctgtgcgattttatgaggttccatttgttg
attcttgatcttagagcataaactattggtgttctgttcaggaaattttc
ccctgtgcccatgtgttagaggcttttccccactttttctgctaatagtt
tcagtgtatctgtttttatgtggaggtccttaatccacttgtacttgagc
tttgtacaaggagataggaaaggatcaatttgtattcttctacacccagg
agctcccagggactaaacctccacatatggagggaccgttggctccagcc
acatgtgtagcaaaggatggccttgttgagcaccactgtgaagaggcctt
atgtcctgtgatggttcaatgtcccagtttaggggtatttgagtgagggg
aggtaggagtagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_38634819_38635978
seq2: B6Ng01-277L08.b_47_1201

seq1  GAATTCTTTTATGAATTCTGAGTATGAGTGTCCCTGTCGCAAGATTTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTATGAATTCTGAGTATGAGTGTCCCTGTCGCAAGATTTGCT  50

seq1  GGGATAGTGTAGCATAGAAAATGTCTTGGGAAAATTATTCCCCACTTCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAGTGTAGCATAGAAAATGTCTTGGGAAAATTATTCCCCACTTCAT  100

seq1  AAGATGAACCCCCAGTATCTTAAGCTTACCTAGATGAGAGATCTACTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAACCCCCAGTATCTTAAGCTTACCTAGATGAGAGATCTACTCAA  150

seq1  TGGGTTTCTCAGTAATTTACCATGGGCAAGGTACATTGTGTTTATGATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTCTCAGTAATTTACCATGGGCAAGGTACATTGTGTTTATGATAA  200

seq1  CACAATTTTTAGCCACTTCTGAAATGTGCACAGTTGCCTCTTTTAAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATTTTTAGCCACTTCTGAAATGTGCACAGTTGCCTCTTTTAAAAAC  250

seq1  ATGGGAATTGTACCTGCAAAGCCACTAATATCTGAAATAGAAAAACAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAATTGTACCTGCAAAGCCACTAATATCTGAAATAGAAAAACAGGC  300

seq1  AACCTGAGATAATCACACACTGCAAGGAATTTCTTCAAACTAGATGATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGAGATAATCACACACTGCAAGGAATTTCTTCAAACTAGATGATCT  350

seq1  GCAAACCATATAAGGATCTTTTAGGGAACAACAGAGTTCAGAGCATGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACCATATAAGGATCTTTTAGGGAACAACAGAGTTCAGAGCATGGAT  400

seq1  GGGAAATTTCTTAGGTAAGTTCAATATTGTGTTAATTATTTCTTTTTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATTTCTTAGGTAAGTTCAATATTGTGTTAATTATTTCTTTTTTTA  450

seq1  CCTGTGTAGATGAAGATCTACAGAAGAATGACACATGGAAATTACTCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTAGATGAAGATCTACAGAAGAATGACACATGGAAATTACTCCCT  500

seq1  GGTGACAGAATTTATCCTGGAGGGCTTAACTAATCGGCCAGAACTCCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACAGAATTTATCCTGGAGGGCTTAACTAATCGGCCAGAACTCCAAA  550

seq1  TGCCTCTGTTTTTTCTGTTTCTAGGAATCTATGTGGTTACTATAGTGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGTTTTTTCTGTTTCTAGGAATCTATGTGGTTACTATAGTGGCA  600

seq1  AATCTGGGCTTAATTACACTGATTTCATTGAATACACACCTTCACACACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGGGCTTAATTACACTGATTTCATTGAATACACACCTTCACACACC  650

seq1  CATGTATTATTTCCTCTTTAACCTGTCATTTGTAGATATTTGTTACTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATTATTTCCTCTTTAACCTGTCATTTGTAGATATTTGTTACTCTT  700

seq1  CTGTCTTTACCCCCAAAATGCTAATTAATTTTGTAGTAGAGAAGAACACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTTACCCCCAAAATGCTAATTAATTTTGTAGTAGAGAAGAACACC  750

seq1  ATCTCCTATACAGGCTGCTTGACTCAACTCTACTTCTTCTGCTTTTTCGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTATACAGGCTGCTTGACTCAACTCTACTTCTTCTGCTTTTTCGT  800

seq1  CATTACAGAATGTTATCTACTGACTGCAATGGCATATGACCGTTATGTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACAGAATGTTATCTACTGACTGCAATGGCATATGACCGTTATGTTG  850

seq1  CTATTTGCAAGCCACTGCTATATAATGTTATATTATCCCCCCGGATCTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGCAAGCCACTGCTATATAATGTTATATTATCCCCCCGGATCTGT  900

seq1  GCTGTGTTCGTGTTTGGGGCATATGTGATGGGATGCTGGGGATCCCTGGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GCTGTGTTCGTGTTTGGGGCATATGTGATGGGATGCTGGGGATCCCTGGG  950

seq1  CCATACACTTTGCATGGCAAGACTGACCTTCTGTGATGCCAACCTTGTCA  1000
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCATACAC-TTGCATGGCAAGACTGACCTTCTGTGATGCCAACCTTGTCA  999

seq1  ATCATTATCTGTGTGACATCCTCCC-TGTGCTCCAGCTTTCCTGCACCAG  1049
      ||||||||||||||||||||||||| |||||| |||| |||||||| |||
seq2  ATCATTATCTGTGTGACATCCTCCCTTGTGCT-CAGC-TTCCTGCA-CAG  1046

seq1  CACTTACAACAATGAGGTTGTGGTCTTTGTTCTGGTTGGCATGAACATTG  1099
      ||||||||||||||||| |||||||||||||||| |  ||||||||||  
seq2  CACTTACAACAATGAGG-TGTGGTCTTTGTTCTGAT--GCATGAACATGT  1093

seq1  TGGTG-TCTACCAGTACCAC-TTTTATCTCCTATGGTTTCATCATTGCTA  1147
       |||| |||||||||||||| |||||||||   |||||||||||||||||
seq2  GGGTGTTCTACCAGTACCACTTTTTATCTCTATTGGTTTCATCATTGCTA  1143

seq1  ACATCTTACGCAT  1160
      || ||||||||||
seq2  AC-TCTTACGCAT  1155