BAC Information

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BAC

Clone NameB6Ng01-278P05
Chromosome9 (Build37)
Map Location 86,654,870 - 86,655,978
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434426, 9330154J02Rik, Tpbg, 2610018I03Rik, Pgm3, Rwdd2, Mod1, Prss35
Downstream geneSnap91, C030002E08Rik, Cyb5r4, LOC666777, LOC244958, LOC100039510, 4922501C03Rik, LOC671706, Tbx18, LOC671731
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278P05.bB6Ng01-278P05.g
ACCGA079059GA079060
length1,1941,096
definitionB6Ng01-278P05.b B6Ng01-278P05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgagaaataccgaatggcagagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tctacctcacactagccagaatggttaaggtcaaaaattcaggtgacagc
agatgctggcaaggatttggagaaagaggaacactcctccattgttggtg
gaattgaaagcttgtacaaccactctggaaatcagtctgtcagttcctca
gaaaattggacatagtactaccggaggaccccgcaatacctctcctgggc
atatatacagaagatgttccaaccggtaagaaggacacatgctccactat
gttcatagcagtcttatttgtaataaccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactattcagctattaaaaagaatgaatttgtgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
agaactcacatgatatgtactcaccaataagtggatattagcccagaaac
ctagaatacccaagatacaagatacaatttgcaaaacacatgaaactcaa
gaagaatgaagaccaaagtgtggacactttgctctttcttagaattggga
acaaaacacccatggaactagttacagagacaaagtttggagctgagaca
aaaggatggaccatctagagactgccatacctggggatctatcccataat
cagcctccaaacgctgacaccattgtacacactagcaagattttgctgaa
aggacccagatatagctgtcttttttgaggctatgccggagcctagcaaa
cacagaagtagatgctcacagtcagctattggatggatcacaggccccca
atggaggagctagagaaagtacccaaagagctaaaggggtctgctaccta
tgtgaacacaatatgaactacactactctacagcttgtgtctctagctgc
atatatatcagagatgctagtcggcatcagttgaaagagaggtccatggg
tttgcaactttatattgctcagtacaggaccgccaagtccagatgaactg
gtggaacgggatgcgcaagatactactacgtactgctatcgctg
gaattctaggccagggaaggttacatagcgagattgtctcaagaacaaaa
gaaagacaagaaagaagggagcaggctgcagggttattgcatctggagag
gaatatagtattaaaagttggtgtatagagagatggcttagcgactaagg
acactggctgttcttccagaggtcctgagttcaattcccagcaaccacat
ggtggctcacaaccatctgttgtgggatctgatgccctcttctggcctgc
aggtgtacatgcagacagagcacccatacagcaaagcagatggtcactga
caggaaattctccttaaggggacacttcttggccttgctccatgcagggc
tgtactctgcaagcgtgggcactgtgttatgttatagtcacttgtagtac
aaactttccctaaagtttgtctttctcctccatctctgagggctgcagcc
atgggccccactctgttacattccctcatctccatctctgcctaagccat
catcacattattcttcttgcttaaaagatggctgtcagtacacaaagttt
atcaaacttctgatctctcagaagaaacactttgagtcactggccccata
gcaaccattagctgtattcacatttgcccttagtgacattagatactaca
agctctaggaaggggtctctaggatatgagtttgcattttgcactggatg
ctacctgtgcctggctgaccctgctttccggctggtttacacgtacgggt
cagtgtcccatgtagctgtgttaatgtgggacaagtacctacctacagtt
actgaacttcacacttctgtgcctgtgctttaatgtgggctctcactacc
tccatcatttccatgatagtttttattctttatcttctaccatctttaca
atggaaaaaataaaccctatagcaagaatattacagtatttaaaataatt
taatttattgggactttttataggtgttggaattcctgggcctggagttc
agcagttgtatgctgcatcagggactaggaaccacaccctgagtctctgg
tgttttactgctgagcatctttcagccacatagtattttgaagtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_86654870_86655978
seq2: B6Ng01-278P05.g_67_1162

seq1  GAATTCTAGGCCAGGGAAGGTTACATAGCGAGATTGTCTCAAGAACAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCCAGGGAAGGTTACATAGCGAGATTGTCTCAAGAACAAAA  50

seq1  GAAAGACAAGAAAGAAGGGAGCAGGCTGCAGGGTTATTGCATCTGGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACAAGAAAGAAGGGAGCAGGCTGCAGGGTTATTGCATCTGGAGAG  100

seq1  GAATATAGTATTAAAAGTTGGTGTATAGAGAGATGGCTTAGCGACTAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATAGTATTAAAAGTTGGTGTATAGAGAGATGGCTTAGCGACTAAGG  150

seq1  ACACTGGCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGGCTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAT  200

seq1  GGTGGCTCACAACCATCTGTTGTGGGATCTGATGCCCTCTTCTGGCCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTCACAACCATCTGTTGTGGGATCTGATGCCCTCTTCTGGCCTGC  250

seq1  AGGTGTACATGCAGACAGAGCACCCATACAGCAAAGCAGATGGTCACTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTACATGCAGACAGAGCACCCATACAGCAAAGCAGATGGTCACTGA  300

seq1  CAGGAAATTCTCCTTAAGGGGACACTTCTTGGCCTTGCTCCATGCAGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAATTCTCCTTAAGGGGACACTTCTTGGCCTTGCTCCATGCAGGGC  350

seq1  TGTACTCTGCAAGCGTGGGCACTGTGTTATGTTATAGTCACTTGTAGTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTCTGCAAGCGTGGGCACTGTGTTATGTTATAGTCACTTGTAGTAC  400

seq1  AAACTTTCCCTAAAGTTTGTCTTTCTCCTCCATCTCTGAGGGCTGCAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTCCCTAAAGTTTGTCTTTCTCCTCCATCTCTGAGGGCTGCAGCC  450

seq1  ATGGGCCCCACTCTGTTACATTCCCTCATCTCCATCTCTGCCTAAGCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCCCCACTCTGTTACATTCCCTCATCTCCATCTCTGCCTAAGCCAT  500

seq1  CATCACATTATTCTTCTTGCTTAAAAGATGGCTGTCAGTACACAAAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACATTATTCTTCTTGCTTAAAAGATGGCTGTCAGTACACAAAGTTT  550

seq1  ATCAAACTTCTGATCTCTCAGAAGAAACACTTTGAGTCACTGGCCCCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAACTTCTGATCTCTCAGAAGAAACACTTTGAGTCACTGGCCCCATA  600

seq1  GCAACCATTAGCTGTATTCACATTTGCCCTTAGTGACATTAGATACTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCATTAGCTGTATTCACATTTGCCCTTAGTGACATTAGATACTACA  650

seq1  AGCTCTAGGAAGGGGTCTCTAGGATATGAGTTTGCATTTTGCACTGGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTAGGAAGGGGTCTCTAGGATATGAGTTTGCATTTTGCACTGGATG  700

seq1  CTACCTGTGCCTGGCTGACCCTGCTTTCCGGCTGGTTTACACGTACGGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTGTGCCTGGCTGACCCTGCTTTCCGGCTGGTTTACACGTACGGGT  750

seq1  CAGTGTCCCATGTAGCTGTGTTAATGTGGGACAAGTACCTACCTACAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCCCATGTAGCTGTGTTAATGTGGGACAAGTACCTACCTACAGTT  800

seq1  ACTGAACTTCACACTTCTGTGCCTGTGCTTTAATGTGGGCTCTCACTACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACTTCACACTTCTGTGCCTGTGCTTTAATGTGGGCTCTCACTACC  850

seq1  TCCATCATTTCCATGATAGTTTTTATTCTTTATCTTCTACCATCTTTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCATTTCCATGATAGTTTTTATTCTTTATCTTCTACCATCTTTACA  900

seq1  ATGGAAAAAATAAACCCTATAGCAAGAATAATTACAGTAATTAAAAATAA  950
      ||||||||||||||||||||||||||||| |||||||| ||| |||||||
seq2  ATGGAAAAAATAAACCCTATAGCAAGAAT-ATTACAGT-ATTTAAAATAA  948

seq1  TTTAAATTTATT-GGACTTTTTATAGGTGTTGAAATCCCTGGGCCTGGAG  999
      ||| |||||||| ||||||||||||||||||| ||| |||||||||||||
seq2  TTT-AATTTATTGGGACTTTTTATAGGTGTTGGAATTCCTGGGCCTGGAG  997

seq1  TTCCAAGCAGTTGTATGCTGCCATCAGGGAACTAGGAACCACACCCTGGA  1049
      |||  ||||||||||||||| |||||||| ||||||||||||||||| ||
seq2  TTC--AGCAGTTGTATGCTG-CATCAGGG-ACTAGGAACCACACCCT-GA  1042

seq1  GTCCTCT-GTGTTTAACTGCTGAGCCATCTTTTCAGCCCACATAGTAATT  1098
      || |||| |||||| ||||||||| |||| |||||| ||||||||||   
seq2  GT-CTCTGGTGTTTTACTGCTGAG-CATC-TTTCAG-CCACATAGTA---  1085

seq1  TTTAAAAGTAG  1109
      |||  ||||||
seq2  TTTTGAAGTAG  1096