BAC Information

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BAC

Clone NameB6Ng01-281D15
Chromosome9 (Build37)
Map Location 33,821,171 - 33,822,333
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042343
Downstream geneKirrel3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-281D15.bB6Ng01-281D15.g
ACCGA080758GA080759
length1,1651,152
definitionB6Ng01-281D15.b B6Ng01-281D15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattactgttctggtttgtttacacatactaggaacagacagtac
tctgaattatttggacatacttctttttctataaactactttcaagctat
gctttaagtcaataggtcagtttcaaaaggtacaatttccttcctttcct
ttcctttcctttgcttaggcagtaatatgtaaggcttgtccctttaggga
aaaatatgttgtcagaagcgaggtgctgtagataacagtttaactgagtc
aaatctagttccatttgggctcacttacaaagatgttatagctttgtata
tttcccttctgcctggttgccaatcaacagtgtcttagtccccatcctcc
atttctgatcagaaaaaaaaaaatgactgaagtttaagtgaaagttttaa
aataaaactcccttctcaggtagtgagattgagtattgcttcatttcatt
ttgtatgtataaagaagggctcacctactagggttaatgtggtaaaaagt
gtgaacaagaaagtaagggtaatgcctctcttgagacttctaacataaat
cccaaccagactcagcaggtggacacaagaggcaagaggaaggaactgca
aatagagaactctgaaaattgcaccatgtcacactgtctaaaggggacct
ccaagaacagcagttatgagccattcaattactttttagtagaagtgata
aagaaatactaaaagttcagctgctttaaagaccaaatacatttaaagag
actctagaagcaaactggaagtttgataagttgatgggagatgagcatgt
tattgggcagatgatgggaactgagaaggaatgagtgcagcggggtgagt
gctgaccctgcgacaggagccactgcagaagtcagaggtaggatggcctc
atctacagagaggagagccactttctctcctggctcctacagtttcaatc
ctagctctgtgcatatgattctctaattttaattggaaatactttaatcg
caccactttacctctaacctgaaaatatatcaattcaaaagtgacttctg
tcaagtctgactttacctagcacacttgtttgcgactgttcacaactctt
tccatgggtgactaggaccttcagagaactattggtaaatagcctagatg
tctaattctagaaaa
gaattccagatatctctaagacttttaacatgaaggggtattgaattttg
tcaaaggatttttcaacatccaatgagattaatatgggatttttttcttt
gaatttgtttctataacggattatactgatggatttttgtatattgaacc
attcctggtatttctttaatgaagcctacttgatcatggtgaatgagagt
ttgatgtgttcttagatttggtttgcaaacattttattgaatattattgt
gtcaatgttcgtaagtgaaatttgtctgaaattctctttattggatcttt
gtgtggtttttgtatcagagtaattgtggcttcataaactggatgaaatt
gtgtttcttctgtttctgttttgtagaatagtttaaggagtattgctatt
ggctcttctttgaacgtttgataaaattctgcactaaaactgtctggttc
tgggctgttttgggatggaaggttttaaatgactgcctctatttccttag
ttgttattggagtgtttctacagtttatctgatattgatttaactttggt
atgtggtatttgtctagaaaatcaactatttcatgtggattttccagttt
tgtccagtataggcttttgtagtaagatttgatgattctgttggaatttc
ctcagtttctcttgtttatctttcccttttcatttctgattttgttaatt
taaatactgtccctatcctgtttagttatggtggctaagggtttactatc
tcattgattttctcaaataactagctctttgttttgttgattctttttat
tattctctttgtttctaattggttgatttaggacttgagtttgactattt
cctgccttgttctcctcttgggtaatgtttgcttctttttagttctagag
cttccagttgtgctaagttgccagttatagggtctccccaatttctttaa
tgaaggtaccttattgctatgaattttccttctaacactgctttcactgt
tgtcccacagggtttggaatatgctatgccttccatttttcaatggaatt
ctagagaagttctttagtttcttttatttatttctttcactggactcagt
taataattgagtagagaacgtctgcccagtctccacgtgagtaaaactgg
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_33821171_33822333
seq2: B6Ng01-281D15.b_44_1208

seq1  GAATTCATTACTGTTCTGGTTTGTTTACACATACTAGGAACAGACAGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTACTGTTCTGGTTTGTTTACACATACTAGGAACAGACAGTAC  50

seq1  TCTGAATTATTTGGACATACTTCTTTTTCTATAAACTACTTTCAAGCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATTATTTGGACATACTTCTTTTTCTATAAACTACTTTCAAGCTAT  100

seq1  GCTTTAAGTCAATAGGTCAGTTTCAAAAGGTACAATTTCCTTCCTTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAAGTCAATAGGTCAGTTTCAAAAGGTACAATTTCCTTCCTTTCCT  150

seq1  TTCCTTTCCTTTGCTTAGGCAGTAATATGTAAGGCTTGTCCCTTTAGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCCTTTGCTTAGGCAGTAATATGTAAGGCTTGTCCCTTTAGGGA  200

seq1  AAAATATGTTGTCAGAAGCGAGGTGCTGTAGATAACAGTTTAACTGAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATGTTGTCAGAAGCGAGGTGCTGTAGATAACAGTTTAACTGAGTC  250

seq1  AAATCTAGTTCCATTTGGGCTCACTTACAAAGATGTTATAGCTTTGTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTAGTTCCATTTGGGCTCACTTACAAAGATGTTATAGCTTTGTATA  300

seq1  TTTCCCTTCTGCCTGGTTGCCAATCAACAGTGTCTTAGTCCCCATCCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTCTGCCTGGTTGCCAATCAACAGTGTCTTAGTCCCCATCCTCC  350

seq1  ATTTCTGATCAGAAAAAAAAAAATGACTGAAGTTTAAGTGAAAGTTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGATCAGAAAAAAAAAAATGACTGAAGTTTAAGTGAAAGTTTTAA  400

seq1  AATAAAACTCCCTTCTCAGGTAGTGAGATTGAGTATTGCTTCATTTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACTCCCTTCTCAGGTAGTGAGATTGAGTATTGCTTCATTTCATT  450

seq1  TTGTATGTATAAAGAAGGGCTCACCTACTAGGGTTAATGTGGTAAAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATGTATAAAGAAGGGCTCACCTACTAGGGTTAATGTGGTAAAAAGT  500

seq1  GTGAACAAGAAAGTAAGGGTAATGCCTCTCTTGAGACTTCTAACATAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACAAGAAAGTAAGGGTAATGCCTCTCTTGAGACTTCTAACATAAAT  550

seq1  CCCAACCAGACTCAGCAGGTGGACACAAGAGGCAAGAGGAAGGAACTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACCAGACTCAGCAGGTGGACACAAGAGGCAAGAGGAAGGAACTGCA  600

seq1  AATAGAGAACTCTGAAAATTGCACCATGTCACACTGTCTAAAGGGGACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGAACTCTGAAAATTGCACCATGTCACACTGTCTAAAGGGGACCT  650

seq1  CCAAGAACAGCAGTTATGAGCCATTCAATTACTTTTTAGTAGAAGTGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAACAGCAGTTATGAGCCATTCAATTACTTTTTAGTAGAAGTGATA  700

seq1  AAGAAATACTAAAAGTTCAGCTGCTTTAAAGACCAAATACATTTAAAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATACTAAAAGTTCAGCTGCTTTAAAGACCAAATACATTTAAAGAG  750

seq1  ACTCTAGAAGCAAACTGGAAGTTTGATAAGTTGATGGGAGATGAGCATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAGAAGCAAACTGGAAGTTTGATAAGTTGATGGGAGATGAGCATGT  800

seq1  TATTGGGCAGATGATGGGAACTGAGAAGGAATGAGTGCAGCGGGGTGAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGGCAGATGATGGGAACTGAGAAGGAATGAGTGCAGCGGGGTGAGT  850

seq1  GCTGACCCTGCGACAGGAGCCACTGCAGAAGTCAGAGGTAGGATGGCCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACCCTGCGACAGGAGCCACTGCAGAAGTCAGAGGTAGGATGGCCTC  900

seq1  ATCTACAGAGAGGAGAGCCACTTTCTCTCCTGGCTCCTACAGTTTCAATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACAGAGAGGAGAGCCACTTTCTCTCCTGGCTCCTACAGTTTCAATC  950

seq1  CTAGCTCTGTGCATATGATTCTCTAATTTTAATTGGAATTACTTTAATCG  1000
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTAGCTCTGTGCATATGATTCTCTAATTTTAATTGGAAATACTTTAATCG  1000

seq1  CACCACTTTACCTCTAAACCTTGAAAATATATCAAATTCAAAAAGTGAC-  1049
      |||||||||||||||||  | |||||||||||| ||||| ||||||||| 
seq2  CACCACTTTACCTCTAA--CCTGAAAATATATC-AATTC-AAAAGTGACT  1046

seq1  TCTGTCAAAGTCCTGACTTAACCTAGCACACTTGTTTGCGACTGTTCAC-  1098
      |||||| |||| ||||||| ||||||||||||||||||||||||||||| 
seq2  TCTGTC-AAGT-CTGACTTTACCTAGCACACTTGTTTGCGACTGTTCACA  1094

seq1  ACTC-TTCCAT--GTGACTAGAACC-TCAGAGAACTA-TGGT-AATAGGC  1142
      |||| ||||||  |||||||| ||| ||||||||||| |||| ||||| |
seq2  ACTCTTTCCATGGGTGACTAGGACCTTCAGAGAACTATTGGTAAATAGCC  1144

seq1  TAGATGTCCTATTCTAGAAAA  1163
      ||||||||  |||||||||||
seq2  TAGATGTCTAATTCTAGAAAA  1165