BAC Information

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BAC

Clone NameB6Ng01-281G12
Chromosome9 (Build37)
Map Location 12,963,881 - 12,964,901
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC622505, LOC100039680, LOC665285
Downstream geneLOC100039729, LOC100039758, Maml2, Mtmr2, Cep57, 2810485I05Rik, LOC665329
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-281G12.bB6Ng01-281G12.g
ACCGA080893GA080894
length1,0971,036
definitionB6Ng01-281G12.b B6Ng01-281G12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtaggcttcttgtatgttcataggtatctctgtctttagattt
gggaagttttcttcaataattttgttgaagatgtttgctgatcctttgag
ttgaaaatcttcattctcatccactcctattatccgtaggtttggtctct
cattgtgtcctggatttcctggatattttgagttaggatctttttgcatt
ttccattttctttgattgttgtgatgatgttctctatggaatcttctgca
cctgagattctctcttccatctcttgtattctgttgctgatgctcaaatc
tatggttccagatttctttcctaggatttctatctccagtgttgcctcac
tttgagttttctttattgtgtctacttccctttttaggtctagtatggtt
ttgttcatttccatcacctgtttgtatgttttttcctctttttctgtaag
gacttctacctgtttgattgtgttttcctgtttttctctatggacttgta
actctttagcagtgttctcctgtatttctttaagtgatttattaaaatcc
ttcttgatgtcctctaccatcatcatgagatatgcttttaaatctaagtc
taggttttcaggtgtgttggggtgtcctggactggatgaagtgggagtgc
tggtttctgatgatggtgagtggtcttggttcctgttagtaagattccta
cgtttacctttcgccatctggtaatctctggagttagtagttatagttga
ctctgtttagagatttgtttcttctggtgattctgctaccgtctatcagc
agacctgggagacagattctctcctctgagtttcagtgctcaaagtactc
tctgctggcaagctcttcttacagggaaaggtgcgcagatatcttgtttt
ttggaccttctcctggccgaagaagaatgcccaaaacaatgcctttctca
gaagctgtgtgctttggcaggttcccagaagctgtcagcttctgtggtgc
agactctcacctgttgcagactaaattcctaagttccagggagttcccgg
gaatccaggatgcgaccgcttgctttcttgaaggctgaggcgctcct
gaattcaggtgcagggatttgccagcaggacatgcaggtggttggatgtg
aactggagtaaagagataaagaacatgccatgtgacaggacacagggata
gaataagtgtaatttagattgagctagctgagagcctgcccagctaaaag
tctaagctataataaatattaatgaacctctgtgtcattatgtatacact
gctgggtactagaaagtactgctatagttaagagcacttgatgctttacc
agaggactggagttccatatgcccatatcaggtggctcacaactgtctat
aacttcagttccagtgaatataatctattctgacatctgcattcatggca
gaaactcatgcaagcacaaaactttaaaaaagactcagctaggaatatta
aggctgattttgctggtttctttatttttaaaatacagcattacctgctt
gctatatcatatgggcaattcctatgggaccattttttttttacactaga
gctaaatgccactgcaaaaagagagtttgtgatgcggacagataagatat
aatttgctaaacacatgaaactcaagaagaatgaagactgaagtgtggac
attatgcccctccttagatttgggaacaaaacacccatggaaggagttac
agagacaaagtttggagctgagatgaaaggatggaccatgtagagactgc
catatccagggatccaccccataatcagcatccaaacgctgacaccattg
catacactagcaagattttattgaaaggacccagatgtagctgtctcttg
tgagactatgccggggcctagcaaacacagaagtggatgctcacagtcag
ctaatgggatggatcatagggctcccaatggaggagctagagaaagtagc
caaggagctaaagggatctgcaaccctataggtggaacaacattatgaac
taaccagtaccccggagctcttgactctagctgcatatatatcaaaagat
ggcctagtcggcatcactgcaaagagaggcccattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_12963881_12964901
seq2: B6Ng01-281G12.g_82_1102 (reverse)

seq1  CAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTTGATATA  50
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CAATGGGCCTCTCTTTGCAGTGAT-GCCGACTAGGCCATCTTTTGATATA  49

seq1  TATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTG  99

seq1  TTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCTA  149

seq1  GCTCCTCCATTGGGAGCCCTATGATCCAT-CCATTAGCTGACTGTGAGCA  199
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GCTCCTCCATTGGGAGCCCTATGATCCATCCCATTAGCTGACTGTGAGCA  199

seq1  TCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTA  249

seq1  CATCTGGGTCCTTTCAATAAAATCTTGCTAGTGTATGCAATGGTGTCAGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGGGTCCTTTCAATAAAATCTTGCTAGTGTATGCAATGGTGTCAGC  299

seq1  GTTTGGATGCTGATTATGGGGTGGATCCCTGGATATGGCAGTCTCTACAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGATGCTGATTATGGGGTGGATCCCTGGATATGGCAGTCTCTACAT  349

seq1  GGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCATCCTTTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCA  399

seq1  TGGGTGTTTTGTTCCCAAATCTAAGGAGGGGCATAATGTCCACACTTCAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTTTTGTTCCCAAATCTAAGGAGGGGCATAATGTCCACACTTCAG  449

seq1  TCTTCATTCTTCTTGAGTTTCATGTGTTTAGCAAATTATATCTTATCTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATTCTTCTTGAGTTTCATGTGTTTAGCAAATTATATCTTATCTGT  499

seq1  CCGCATCACAAACTCTCTTTTTGCAGTGGCATTTAGCTCTAGTGTAAAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCATCACAAACTCTCTTTTTGCAGTGGCATTTAGCTCTAGTGTAAAAA  549

seq1  AAAAATGGTCCCATAGGAATTGCCCATATGATATAGCAAGCAGGTAATGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGGTCCCATAGGAATTGCCCATATGATATAGCAAGCAGGTAATGC  599

seq1  TGTATTTTAAAAATAAAGAAACCAGCAAAATCAGCCTTAATATTCCTAGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTTAAAAATAAAGAAACCAGCAAAATCAGCCTTAATATTCCTAGC  649

seq1  TGAGTCTTTTTTAAAGTTTTGTGCTTGCATGAGTTTCTGCCATGAATGCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTTTTTTAAAGTTTTGTGCTTGCATGAGTTTCTGCCATGAATGCA  699

seq1  GATGTCAGAATAGATTATATTCACTGGAACTGAAGTTATAGACAGTTGTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCAGAATAGATTATATTCACTGGAACTGAAGTTATAGACAGTTGTG  749

seq1  AGCCACCTGATATGGGCATATGGAACTCCAGTCCTCTGGTAAAGCATCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCTGATATGGGCATATGGAACTCCAGTCCTCTGGTAAAGCATCAA  799

seq1  GTGCTCTTAACTATAGCAGTACTTTCTAGTACCCAGCAGTGTATACATAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCTTAACTATAGCAGTACTTTCTAGTACCCAGCAGTGTATACATAA  849

seq1  TGACACAGAGGTTCATTAATATTTATTATAGCTTAGACTTTTAGCTGGGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACAGAGGTTCATTAATATTTATTATAGCTTAGACTTTTAGCTGGGC  899

seq1  AGGCTCTCAGCTAGCTCAATCTAAATTACACTTATTCTATCCCTGTGTCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTCAGCTAGCTCAATCTAAATTACACTTATTCTATCCCTGTGTCC  949

seq1  TGTCACATGGCATGTTCTTTATCTCTTTACTCCAGTTCACATCCAACCAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACATGGCATGTTCTTTATCTCTTTACTCCAGTTCACATCCAACCAC  999

seq1  CTGCATGTCCTGCTGGCAAATC  1021
      ||||||||||||||||||||||
seq2  CTGCATGTCCTGCTGGCAAATC  1021