BAC Information

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BAC

Clone NameB6Ng01-282P13
Chromosome9 (Build37)
Map Location 38,323,771 - 38,401,843
singlet/doubletdoublet
Overlap geneOlfr908, Olfr909, Olfr910, Olfr912, Olfr913
Upstream geneBC024479, Esam1, Vsig2, Nrgn, Spa17, Siae, Tbrg1, Panx3, LOC666881, EG627798, Olfr160, Olfr151, Olfr874, Olfr875, Olfr876, Olfr877, Olfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907
Downstream geneOlfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933, Olfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1, Olfr950-ps1, Olfr951, Olfr952, Olfr953-ps1, Olfr954, Olfr955, Olfr956-ps1, Olfr44, Olfr957, Olfr958, Olfr959, AW551984
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282P13.bB6Ng01-282P13.g
ACCGA082048GA082049
length1,1631,166
definitionB6Ng01-282P13.b B6Ng01-282P13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,400,680 - 38,401,843)(38,323,771 - 38,324,942)
sequence
gaattcaattaccatagaagcattttcaaaagtcattcttctctcagaga
atctgtggagacaaagaaaatgaatgaaaatggtcagtttcttgtttgtc
aataaacaaatagcttcaaattctttgaaccagcctttcatgatactatg
gtacagatcaacattgtcttcctctagtagcatcacagaggttaattata
gtaaaaagcgtcaccaatataccacagctttaaccagtgacctaatattg
ctaatattatattatttaatacttgaaaattcaaaggcaaagggcaaatt
ggatgtataggaactaattgcccttcttttttctcatcctttattactac
cgtctattcttcattcagggaaaaattttagcaatctactggtgaccttt
ctctagactggtcttcagcatacagtatttccaatatcaagcaaaagaaa
ccaactcctcaattggatatacctacatacatacatacatagatacatac
atcaattggatatatatatccatatatatatatatatatacatagctagt
tcacaaaatttcataaatctaaagaaattggcctctcttatcgaaattca
taaatctagaatatttttctgttgatttctcttgaaccttagacttgctc
ataacattacagattttggggctctttttcacaataaagccactatgaaa
actaaaatccaaagaaaacattagaagaaatactaaatcatctatgtgaa
gtcaaatagcaattataatcacctagagggaagaataatgttggatgctg
gagctactggaaatgaaaatggcccaagaggaagaaaattcaatcttgcg
aagtaaaaagagtttggaaatctaatgttcaacctgttaacttcaataaa
tggtgaattagtaacagaatccacctgaaattaccttattgcaggtatat
ttacacaaaaacccaagtatagagaaaaggcatatgtgaatgagcctcaa
tacttgggtcatttcaaaaaggatatgtggtcaaaacaaatatatacaca
taacctctatacaataattattttctcagtaatgtattcaagaaaatgta
agcttttatatgaatagattttagaacttaaccctatttagagagagaaa
gtcttatccggtc
gaattctcaccttcacacccccatgtactttttccttttaaacttgtctt
tcattgacctttgttattcatctgtaattacacccaaaatgctgatgaac
ttcttagtaaggaagaactttatctcctatgtaggatgtatgacccagct
ctatttatttgttttttttgctgttagtgaatgttgtgttctgtcatcaa
tggcctatgatcgttatgtggccatatgcaatccactcttgtataacatt
gctatgtctcccaaggtttgttcctatcttatgcttggttcatacataat
gggattttctggtgccatgattcacactggatggatgcttagactgacct
tctgtgacaggagcattatcaaccactatttctgtgatctactcccttat
tgcagctctcctgtaccaacacctatgccaatgagattgagattattatt
gtaggtggaattgatatcattgttcccagtattatcatttttacttctta
tggcttcgttctctctaacatcttccaaatgagatctactgagggcagat
ccaaagccttcagcacctgcagttcccacatagttgctgtttctttattc
tttggttcaggcgcattcatgtatcttcaaccctcttcacctgagtctat
ggatcagggaaaaaggtcttcggttttttataccatattggtgcctatga
tgaatcccttaatctatagtttgaggaacaaagatgtgaaaattgccctg
aaaaaaacatttagcacgcagagtgtttgataagaaattaatgtttatca
ctatacttatgctaattagaatttctgtggatttaatcaaattctgtgga
cttaatttttttttatctattttttttaaatcgtataattcataggatat
tggtatatctttggtcttccatatgtttttgttataaatattccttagtt
tgacaatattggcataatcttcttttatcattttaacttagagtaaaagc
aagtagtaaacatattttcccttttaattaaatgtcattatggattgtat
ctagaaaataacaatgatctggccatagtttacaaagttaacccagtatt
gttcaagtatcttgtgtggatttgtcagtatgagcatgacaatttgcctt
taatttttctggggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_38400680_38401843
seq2: B6Ng01-282P13.b_47_1209 (reverse)

seq1  GACC-GATAAGA-TTTCTCTCT-TAAATAGGG-TAAGTTCTAAAATCTAT  46
      |||| ||||||| ||||||||| ||||||||| |||||||||||||||||
seq2  GACCGGATAAGACTTTCTCTCTCTAAATAGGGTTAAGTTCTAAAATCTAT  50

seq1  TCATATTAAAAGCTTACATTTTCTTGAATACATTTACTGAG-AAATAATT  95
      ||||| |||||||||||||||||||||||||| |||||||| ||||||||
seq2  TCATA-TAAAAGCTTACATTTTCTTGAATACA-TTACTGAGAAAATAATT  98

seq1  ATTGTATAGAAGGGTTTATGTTGTATATTATTTGTTTTGACCACATATCC  145
      ||||||||||   | ||||| |||||| ||||||||||||||||||||||
seq2  ATTGTATAGA---GGTTATG-TGTATA-TATTTGTTTTGACCACATATCC  143

seq1  TTTTTGAAATGA-CCAAGTATTGAGGCTCATTCACATATGCCTTTTCTCT  194
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAAATGACCCAAGTATTGAGGCTCATTCACATATGCCTTTTCTCT  193

seq1  ATACTTGGGTTTTTGTGTAAATATACCTGCAATAAGGTAATTTCAGGTGG  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTGGGTTTTTGTGTAAATATACCTGCAATAAGGTAATTTCAGGTGG  243

seq1  ATTCTGTTACTAATTCACCATTTATTGAAGTTAACAGGTTGAACATTAGA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTTACTAATTCACCATTTATTGAAGTTAACAGGTTGAACATTAGA  293

seq1  TTTCCAAACTCTTTTTACTTCGCAAGATTGAATTTTCTTCCTCTTGGGCC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAACTCTTTTTACTTCGCAAGATTGAATTTTCTTCCTCTTGGGCC  343

seq1  ATTTTCATTTCCAGTAGCTCCAGCATCCAACATTATTCTTCCCTCTAGGT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCATTTCCAGTAGCTCCAGCATCCAACATTATTCTTCCCTCTAGGT  393

seq1  GATTATAATTGCTATTTGACTTCACATAGATGATTTAGTATTTCTTCTAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATAATTGCTATTTGACTTCACATAGATGATTTAGTATTTCTTCTAA  443

seq1  TGTTTTCTTTGGATTTTAGTTTTCATAGTGGCTTTATTGTGAAAAAGAGC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCTTTGGATTTTAGTTTTCATAGTGGCTTTATTGTGAAAAAGAGC  493

seq1  CCCAAAATCTGTAATGTTATGAGCAAGTCTAAGGTTCAAGAGAAATCAAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAATCTGTAATGTTATGAGCAAGTCTAAGGTTCAAGAGAAATCAAC  543

seq1  AGAAAAATATTCTAGATTTATGAATTTCGATAAGAGAGGCCAATTTCTTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATATTCTAGATTTATGAATTTCGATAAGAGAGGCCAATTTCTTT  593

seq1  AGATTTATGAAATTTTGTGAACTAGCTATGTATATATATATATATATATG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTATGAAATTTTGTGAACTAGCTATGTATATATATATATATATATG  643

seq1  GATATATATATCCAATTGATGTATGTATCTATGTATGTATGTATGTAGGT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATATATCCAATTGATGTATGTATCTATGTATGTATGTATGTAGGT  693

seq1  ATATCCAATTGAGGAGTTGGTTTCTTTTGCTTGATATTGGAAATACTGTA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCAATTGAGGAGTTGGTTTCTTTTGCTTGATATTGGAAATACTGTA  743

seq1  TGCTGAAGACCAGTCTAGAGAAAGGTCACCAGTAGATTGCTAAAATTTTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAGACCAGTCTAGAGAAAGGTCACCAGTAGATTGCTAAAATTTTT  793

seq1  CCCTGAATGAAGAATAGACGGTAGTAATAAAGGATGAGAAAAAAGAAGGG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAATGAAGAATAGACGGTAGTAATAAAGGATGAGAAAAAAGAAGGG  843

seq1  CAATTAGTTCCTATACATCCAATTTGCCCTTTGCCTTTGAATTTTCAAGT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAGTTCCTATACATCCAATTTGCCCTTTGCCTTTGAATTTTCAAGT  893

seq1  ATTAAATAATATAATATTAGCAATATTAGGTCACTGGTTAAAGCTGTGGT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATAATATAATATTAGCAATATTAGGTCACTGGTTAAAGCTGTGGT  943

seq1  ATATTGGTGACGCTTTTTACTATAATTAACCTCTGTGATGCTACTAGAGG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGGTGACGCTTTTTACTATAATTAACCTCTGTGATGCTACTAGAGG  993

seq1  AAGACAATGTTGATCTGTACCATAGTATCATGAAAGGCTGGTTCAAAGAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAATGTTGATCTGTACCATAGTATCATGAAAGGCTGGTTCAAAGAA  1043

seq1  TTTGAAGCTATTTGTTTATTGACAAACAAGAAACTGACCATTTTCATTCA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGCTATTTGTTTATTGACAAACAAGAAACTGACCATTTTCATTCA  1093

seq1  TTTTCTTTGTCTCCACAGATTCTCTGAGAGAAGAATGACTTTTGAAAATG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTGTCTCCACAGATTCTCTGAGAGAAGAATGACTTTTGAAAATG  1143

seq1  CTTCTATGGTAATTGAATTC  1164
      ||||||||||||||||||||
seq2  CTTCTATGGTAATTGAATTC  1163

seq1: chr9_38323771_38324942
seq2: B6Ng01-282P13.g_67_1232

seq1  GAATTCTCACCTTCACACCCCCATGTACTTTTTCCTTTTAAACTTGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTTCACACCCCCATGTACTTTTTCCTTTTAAACTTGTCTT  50

seq1  TCATTGACCTTTGTTATTCATCTGTAATTACACCCAAAATGCTGATGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGACCTTTGTTATTCATCTGTAATTACACCCAAAATGCTGATGAAC  100

seq1  TTCTTAGTAAGGAAGAACTTTATCTCCTATGTAGGATGTATGACCCAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGTAAGGAAGAACTTTATCTCCTATGTAGGATGTATGACCCAGCT  150

seq1  CTATTTATTTGTTTTTTTTGCTGTTAGTGAATGTTGTGTTCTGTCATCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTATTTGTTTTTTTTGCTGTTAGTGAATGTTGTGTTCTGTCATCAA  200

seq1  TGGCCTATGATCGTTATGTGGCCATATGCAATCCACTCTTGTATAACATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTATGATCGTTATGTGGCCATATGCAATCCACTCTTGTATAACATT  250

seq1  GCTATGTCTCCCAAGGTTTGTTCCTATCTTATGCTTGGTTCATACATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGTCTCCCAAGGTTTGTTCCTATCTTATGCTTGGTTCATACATAAT  300

seq1  GGGATTTTCTGGTGCCATGATTCACACTGGATGGATGCTTAGACTGACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTTTCTGGTGCCATGATTCACACTGGATGGATGCTTAGACTGACCT  350

seq1  TCTGTGACAGGAGCATTATCAACCACTATTTCTGTGATCTACTCCCTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGACAGGAGCATTATCAACCACTATTTCTGTGATCTACTCCCTTAT  400

seq1  TGCAGCTCTCCTGTACCAACACCTATGCCAATGAGATTGAGATTATTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTCTCCTGTACCAACACCTATGCCAATGAGATTGAGATTATTATT  450

seq1  GTAGGTGGAATTGATATCATTGTTCCCAGTATTATCATTTTTACTTCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTGGAATTGATATCATTGTTCCCAGTATTATCATTTTTACTTCTTA  500

seq1  TGGCTTCGTTCTCTCTAACATCTTCCAAATGAGATCTACTGAGGGCAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCGTTCTCTCTAACATCTTCCAAATGAGATCTACTGAGGGCAGAT  550

seq1  CCAAAGCCTTCAGCACCTGCAGTTCCCACATAGTTGCTGTTTCTTTATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCCTTCAGCACCTGCAGTTCCCACATAGTTGCTGTTTCTTTATTC  600

seq1  TTTGGTTCAGGCGCATTCATGTATCTTCAACCCTCTTCACCTGAGTCTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTCAGGCGCATTCATGTATCTTCAACCCTCTTCACCTGAGTCTAT  650

seq1  GGATCAGGGAAAAAGGTCTTCGGTTTTTTATACCATATTGGTGCCTATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAGGGAAAAAGGTCTTCGGTTTTTTATACCATATTGGTGCCTATGA  700

seq1  TGAATCCCTTAATCTATAGTTTGAGGAACAAAGATGTGAAAATTGCCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCCCTTAATCTATAGTTTGAGGAACAAAGATGTGAAAATTGCCCTG  750

seq1  AAAAAAACATTTAGCACGCAGAGTGTTTGATAAGAAATTAATGTTTATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACATTTAGCACGCAGAGTGTTTGATAAGAAATTAATGTTTATCA  800

seq1  CTATACTTATGCTAATTAGAATTTCTGTGGATTTAATCAAATTCTGTGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACTTATGCTAATTAGAATTTCTGTGGATTTAATCAAATTCTGTGGA  850

seq1  CTTAA-TTTTTTTTATCTA-TTTTTTTAAATCGTATAATTCATAGGATAT  898
      ||||| ||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTTAATTTTTTTTTATCTATTTTTTTTAAATCGTATAATTCATAGGATAT  900

seq1  TGGTATATCTTTGGTCTTCCATATGTTTTTGTTATAAATATTCCTTAGTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATATCTTTGGTCTTCCATATGTTTTTGTTATAAATATTCCTTAGTT  950

seq1  TGACAATATTGGCATAATCTTCTTTTATCATTTTAACTAAGAGTAAAAGC  998
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGACAATATTGGCATAATCTTCTTTTATCATTTTAACTTAGAGTAAAAGC  1000

seq1  AAGTAGTTAAACATATTTTCCC-TTTAATTAAATGTCATTATGGATTGTA  1047
      |||||| ||||||||||||||| |||||||||||||||||||||||||||
seq2  AAGTAG-TAAACATATTTTCCCTTTTAATTAAATGTCATTATGGATTGTA  1049

seq1  TCTTAGAAATAACCAATGATCTGGCAATAGTTTTACAAAG-TAACACAGT  1096
      || ||||||  | |||||||||||| |||| ||||||||| |||| ||||
seq2  TC-TAGAAAATAACAATGATCTGGCCATAG-TTTACAAAGTTAACCCAGT  1097

seq1  ATTGTCCAAGTATCTTGTGGGAATTTGTCAATGTAATGAAGCATGAACCA  1146
      ||||| ||||||||||||| | |||||||| |   ||| |||||||  ||
seq2  ATTGTTCAAGTATCTTGTGTGGATTTGTCAGT---ATG-AGCATGA--CA  1141

seq1  AATTGTCTTTTAATTTTTCTTGGGCA  1172
      | ||| | |||||||||||| |||||
seq2  ATTTG-CCTTTAATTTTTCTGGGGCA  1166