BAC Information

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BAC

Clone NameB6Ng01-284E23
Chromosome9 (Build37)
Map Location 38,664,080 - 38,781,850
singlet/doubletdoublet
Overlap geneOlfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1
Upstream geneOlfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26
Downstream geneOlfr933, Olfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1, Olfr950-ps1, Olfr951, Olfr952, Olfr953-ps1, Olfr954, Olfr955, Olfr956-ps1, Olfr44, Olfr957, Olfr958, Olfr959, AW551984, Olfr148, Olfr960, Olfr961, GA_x5J8B7W60AJ-4787-4010, Olfr963, Olfr964-ps1, Olfr149, Olfr965, Olfr966-ps1, Olfr150, Olfr967, Olfr968, Olfr969, Olfr970, Olfr971, Olfr972, Olfr973, LOC100043015, Olfr974, Olfr975, Olfr976, Olfr977-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284E23.bB6Ng01-284E23.g
ACCGA083044GA083045
length1,100848
definitionB6Ng01-284E23.b B6Ng01-284E23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,780,759 - 38,781,850)(38,664,080 - 38,664,925)
sequence
gaattctttaaaaacccttgaaggtatttctaatttagacatgtaggtta
ggacaatatgagagtagatttggaactagagtcaaggctatgtgataata
cattctctggttttatgtaagaggtgttgatatttcattgacatttgtca
cctaactaaccacaaacttaagaggaagagatattgccaatgagaactat
tttagatttcaaaggatgatccagatttcaaagcttctagatgatataca
agaggagggacttgtggtctcattgaagtgaaaaactgaagcatggagct
cattcacaacaggattaaacaagagagtaatctcagcaaagagtacatta
tttcagaattttatataatttctagaaaattgggtttgagaaaaccatag
aaaagggaaaatagatatttctggcttcaaaagattttatcaaaaggaat
attatatatttggaaaaacatgaaagaatgttcttccaaagcactcttta
aagaaaagaagcccatgtgtgtacctatatttcttaagacaaagaacaca
atccacaaataaatggtactaatgaattcaaatgagtgttttaaaaatag
tctcatagtcattgagagtttgcatgagtgtatggaaatcaactagtact
cccgatgtaaatgaagctgtaaaacttccttcctaacctcaggattttat
atgtattttgcaagaaaaataaattaaaagttgaaatttttgatagtctc
agaagcaatgagggtttcatttcagaggctgtctttattgtcgaaaagtt
tgacactttggacaagtcatttagtgagttttaatgtgaatcaagaatga
gaacacaactttgtaagaattactttgactaaccaaattatgacactaat
caataggtaataaacattaaaaacttgaatattgtcatataatacagaga
tatgaaaatatacaagcttagaataagaagtatagatttgtgcatttcct
tttcatccccaccacttcatctttgcagatgaaaaaatatattaacattg
gaagaaataatatgcctttttatacatttgcctaactttctgaaattttg

gaattctactgcccttcctccctatcttctttctcttactttccctcctt
ccccctcatctgcaatgctttttgatccttaaaggggataggagtacaaa
tgattatcttaggtttcaggccttatctatcacttattctcagtatccta
ggtagccataggtggttatttaccactgctcagtgtaaatggaaacgttt
ctccttttgtgtcgagaatagcttttgcctaagggtttaaacataaatat
ttagaaggcagtttgaatttgtatctatttgggtaactgttagttgtaat
tttcatcatagagctgatctatatactagtgatggaatctgtgatttgga
gagcaactgtctttaactgttcaccacaatgcccaggaaactaaaacgca
tatttctaattgcaaggacacagatgcttatggcaataactgggggatat
gaacatgtatagacaatgtgaaaagagattaatagggaaaagaggattag
acaagcaaaggaaagagaagagagaggctggagttaaaaagaatcaaatt
gcaaaatgcatgacacacatgtgtgaaactgttaaaatataaatttttat
tttttcaaaagaaaactcgcaatgttttgcaagaagtactgggagtgctc
actaatattgaatgtgtattagcatgaaagtggattgtcaatgcattcat
taaggtgtcagagcacaagacaaatgcacaagaaaatcaagagaaacaca
gaaaataacagttgaagaaatgattggcagcttctgttttgatcataaaa
tgagaaagagctataagaatatgttctggctgggtggtggggggaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_38780759_38781850
seq2: B6Ng01-284E23.b_44_1143 (reverse)

seq1  CAAAA-TTCAG-AAGTTA-GCAAATGTAT-AAAAGGCATAT--ATTCTT-  43
      ||||| ||||| |||||| |||||||||| |||||||||||   ||||| 
seq2  CAAAATTTCAGAAAGTTAGGCAAATGTATAAAAAGGCATATTATTTCTTC  50

seq1  CAATGTTAATATA--TTTTCATCTGCAAAGATGAAGTGGTTGGGATGAAA  91
      |||||||||||||  ||||||||||||||||||||||||| |||||||||
seq2  CAATGTTAATATATTTTTTCATCTGCAAAGATGAAGTGGTGGGGATGAAA  100

seq1  AGGAAATGCACAAATCTATACTTCTTATTCTAAGCTTGTATATTTTCATA  141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATGCACAAATCTATACTTCTTATTCTAAGCTTGTATATTTTCATA  150

seq1  TCTCTGTATTATATGACAATATTCAAGTTTTTAAATGTTTATTACCTATT  191
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCTCTGTATTATATGACAATATTCAAGTTTTT-AATGTTTATTACCTATT  199

seq1  GATTAGTGTCATAATTTGGTTAGTCAAAGTAATTCTTACAAAGTTGTGTT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGTGTCATAATTTGGTTAGTCAAAGTAATTCTTACAAAGTTGTGTT  249

seq1  CTCATTCTTGATTCACATTAAAACTCACTAAATGACTTGTCCAAAGTGTC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCTTGATTCACATTAAAACTCACTAAATGACTTGTCCAAAGTGTC  299

seq1  AAACTTTTCGACAATAAAGACAGCCTCTGAAATGAAACCCTCATTGCTTC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTTCGACAATAAAGACAGCCTCTGAAATGAAACCCTCATTGCTTC  349

seq1  TGAGACTATCAAAAATTTCAACTTTTAATTTATTTTTCTTGCAAAATACA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTATCAAAAATTTCAACTTTTAATTTATTTTTCTTGCAAAATACA  399

seq1  TATAAAATCCTGAGGTTAGGAAGGAAGTTTTACAGCTTCATTTACATCGG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATCCTGAGGTTAGGAAGGAAGTTTTACAGCTTCATTTACATCGG  449

seq1  GAGTACTAGTTGATTTCCATACACTCATGCAAACTCTCAATGACTATGAG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACTAGTTGATTTCCATACACTCATGCAAACTCTCAATGACTATGAG  499

seq1  ACTATTTTTAAAACACTCATTTGAATTCATTAGTACCATTTATTTGTGGA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTTTAAAACACTCATTTGAATTCATTAGTACCATTTATTTGTGGA  549

seq1  TTGTGTTCTTTGTCTTAAGAAATATAGGTACACACATGGGCTTCTTTTCT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTCTTTGTCTTAAGAAATATAGGTACACACATGGGCTTCTTTTCT  599

seq1  TTAAAGAGTGCTTTGGAAGAACATTCTTTCATGTTTTTCCAAATATATAA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAGTGCTTTGGAAGAACATTCTTTCATGTTTTTCCAAATATATAA  649

seq1  TATTCCTTTTGATAAAATCTTTTGAAGCCAGAAATATCTATTTTCCCTTT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTTTTGATAAAATCTTTTGAAGCCAGAAATATCTATTTTCCCTTT  699

seq1  TCTATGGTTTTCTCAAACCCAATTTTCTAGAAATTATATAAAATTCTGAA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGGTTTTCTCAAACCCAATTTTCTAGAAATTATATAAAATTCTGAA  749

seq1  ATAATGTACTCTTTGCTGAGATTACTCTCTTGTTTAATCCTGTTGTGAAT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTACTCTTTGCTGAGATTACTCTCTTGTTTAATCCTGTTGTGAAT  799

seq1  GAGCTCCATGCTTCAGTTTTTCACTTCAATGAGACCACAAGTCCCTCCTC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCATGCTTCAGTTTTTCACTTCAATGAGACCACAAGTCCCTCCTC  849

seq1  TTGTATATCATCTAGAAGCTTTGAAATCTGGATCATCCTTTGAAATCTAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATATCATCTAGAAGCTTTGAAATCTGGATCATCCTTTGAAATCTAA  899

seq1  AATAGTTCTCATTGGCAATATCTCTTCCTCTTAAGTTTGTGGTTAGTTAG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTCTCATTGGCAATATCTCTTCCTCTTAAGTTTGTGGTTAGTTAG  949

seq1  GTGACAAATGTCAATGAAATATCAACACCTCTTACATAAAACCAGAGAAT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAAATGTCAATGAAATATCAACACCTCTTACATAAAACCAGAGAAT  999

seq1  GTATTATCACATAGCCTTGACTCTAGTTCCAAATCTACTCTCATATTGTC  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTATCACATAGCCTTGACTCTAGTTCCAAATCTACTCTCATATTGTC  1049

seq1  CTAACCTACATGTCTAAATTAGAAATACCTTCAAGGGTTTTTAAAGAATT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCTACATGTCTAAATTAGAAATACCTTCAAGGGTTTTTAAAGAATT  1099

seq1  C  1092
      |
seq2  C  1100

seq1: chr9_38664080_38664925
seq2: B6Ng01-284E23.g_66_913

seq1  GAATTCTACTGCCCTTCCTCCCTATCTTCTTTCTCTTACTTTCCCTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTGCCCTTCCTCCCTATCTTCTTTCTCTTACTTTCCCTCCTT  50

seq1  CCCCCTCATCTGCAATGCTTTTTGATCCTTAAAGGGGATAGGAGTACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCATCTGCAATGCTTTTTGATCCTTAAAGGGGATAGGAGTACAAA  100

seq1  TGATTATCTTAGGTTTCAGGCCTTATCTATCACTTATTCTCAGTATCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATCTTAGGTTTCAGGCCTTATCTATCACTTATTCTCAGTATCCTA  150

seq1  GGTAGCCATAGGTGGTTATTTACCACTGCTCAGTGTAAATGGAAACGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCCATAGGTGGTTATTTACCACTGCTCAGTGTAAATGGAAACGTTT  200

seq1  CTCCTTTTGTGTCGAGAATAGCTTTTGCCTAAGGGTTTAAACATAAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTTGTGTCGAGAATAGCTTTTGCCTAAGGGTTTAAACATAAATAT  250

seq1  TTAGAAGGCAGTTTGAATTTGTATCTATTTGGGTAACTGTTAGTTGTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGGCAGTTTGAATTTGTATCTATTTGGGTAACTGTTAGTTGTAAT  300

seq1  TTTCATCATAGAGCTGATCTATATACTAGTGATGGAATCTGTGATTTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCATAGAGCTGATCTATATACTAGTGATGGAATCTGTGATTTGGA  350

seq1  GAGCAACTGTCTTTAACTGTTCACCACAATGCCCAGGAAACTAAAACGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAACTGTCTTTAACTGTTCACCACAATGCCCAGGAAACTAAAACGCA  400

seq1  TATTTCTAATTGCAAGGACACAGATGCTTATGGCAATAACTGGGGGATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTAATTGCAAGGACACAGATGCTTATGGCAATAACTGGGGGATAT  450

seq1  GAACATGTATAGACAATGTGAAAAGAGATTAATAGGGAAAAGAGGATTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGTATAGACAATGTGAAAAGAGATTAATAGGGAAAAGAGGATTAG  500

seq1  ACAAGCAAAGGAAAGAGAAGAGAGAGGCTGGAGTTAAAAAGAATCAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCAAAGGAAAGAGAAGAGAGAGGCTGGAGTTAAAAAGAATCAAATT  550

seq1  GCAAAATGCATGACACACATGTGTGAAACTGTTAAAATATAAATTTTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAATGCATGACACACATGTGTGAAACTGTTAAAATATAAATTTTTAT  600

seq1  TTTTTCAAAAGAAAACTCGCAATGTTTTGCAAGAAGTACTGGGAGTGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAAAAGAAAACTCGCAATGTTTTGCAAGAAGTACTGGGAGTGCTC  650

seq1  ACTAATATTGAATGTGTATTAGCATGAAAGTGGATTGTCAATGCATTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATATTGAATGTGTATTAGCATGAAAGTGGATTGTCAATGCATTCAT  700

seq1  TAAGGTGTCAGAGCACAAGACAAATGCACAAGAAAATCAAGAGAAACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTGTCAGAGCACAAGACAAATGCACAAGAAAATCAAGAGAAACACA  750

seq1  GAAAATAACAGTTGAAGAAATGATTGGCAGCTTCTGTTTTGATCATAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAACAGTTGAAGAAATGATTGGCAGCTTCTGTTTTGATCATAAAA  800

seq1  TGAGAAAGAGCTATAAGAATATGTTCTGGCTGGGTG--TGGGGGAAGA  846
      ||||||||||||||||||||||||||||||||||||   |||||||||
seq2  TGAGAAAGAGCTATAAGAATATGTTCTGGCTGGGTGGTGGGGGGAAGA  848