BAC Information

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BAC

Clone NameB6Ng01-284F15
Chromosome9 (Build37)
Map Location 73,168,653 - 73,303,628
singlet/doubletdoublet
Overlap genenone
Upstream geneSuhw4, LOC100041760, Mns1, LOC666007, Tex9, 4930509E16Rik, Rfxdc2, Nedd4, EG639396, Prtg, LOC100040694, Pygo1, Dyx1c1, EG546143, Ccpg1, LOC100041896, Pigb, Rab27a, 2410004A20Rik, BC003885, EG436081
Downstream geneUnc13c, Wdr72, Nr1h2-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284F15.bB6Ng01-284F15.g
ACCGA083076GA083077
length858784
definitionB6Ng01-284F15.b B6Ng01-284F15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,168,653 - 73,169,183)(73,302,853 - 73,303,628)
sequence
gaattccaagatgctcaaaatagagatcttaaagtgtgtttcgatcctgt
tgagtgccaatcttccactgaaggcttagaaaggatctgggcctcacagc
ctacccagcagaaggacaactattcaactatgcttgtagcagctttattt
gtaatagcaagaaactggagacaacctaaaagtcccttgattaaagaatg
gataaacaaaatgtggtacatctacacaatggagtattacttagctgttt
aaaaaaatgacatcatgaaatttgcaggcaaatggatgaaactagaaaaa
aaatcatcctgagtgagataatccagacctggaaagacaagcgtggtatg
ttcttatttataagtagatattagctatacagtaaaggataatcatgcta
caatccacagacccagagaggctaagtaacaaggtgggctcaaggctgga
tgcatggatcttccagggaaggggaaataaaatagattttgtgggtggac
tggggcaggtgaggatgggaatgggtgggataatagcaggatcatcacca
gttaccatacaatttcccccccccgcatcaccacaagttattgaattgca
aattgtgattaaggtgtttgaattaactccaggcccttttaatttgattt
ctgatagccaatatgttgtttaatatattgcaatgttttggaggtggtag
gcaaagttaatctaaaaatctaccattggaaaatttagttcttacatttg
caagattttatcttgaatagacattcaccgtttttttgtacaacatattc
atgctcataccagattgcctggaccccttgcagaagggaatgatatttgt
agataaag
gaattcccaggaagcagtgggtgtttagaccatcaccccagtaactggtc
tagtattacattcaatgcgttctaacgcttaacacaggcaatcctttctg
agagccacaattagcaaaagtctttttctagccgctgtcaatcaggcttt
cttagtcatgggtgctaatcaacactggctttcctttaagatgaaagaaa
aataagttacctccagttgtagtttgacatattcccattttaaatacttt
actactcccatcagcttcagtaagggttgggagaaaagaaaaacaaccaa
gatttggcacgacagaactcaaatccatgaaaataaacagacaaacaaaa
actctgaatcaatttacaaactgtgtccaccaaagagaaattaacactga
agccaaaactaataatgttatttaagaaatatttattgagcatctcctaa
gtccaaggaacaaatccatattgggactatgaaagtaaataagtccctgc
cccaatgttctaatcaaatatatgagaaatttagatgctttgatgaaaga
acaaagacgttcgcacaaacaacagagagcatagcaaagaacagaacata
atgaaaagtaaaaccaaggccagagaggcccctagatgacagggtgggtg
tggcagtttgaaagaaaattggctcccataggctcacagggagtggcact
gtttagaaggtgtgctctttgtttagaataggtgtggcactgttggaggg
gagtgtgtcattggggagtgggcctttgaggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_73168653_73169183
seq2: B6Ng01-284F15.b_45_575

seq1  GAATTCCAAGATGCTCAAAATAGAGATCTTAAAGTGTGTTTCGATCCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGATGCTCAAAATAGAGATCTTAAAGTGTGTTTCGATCCTGT  50

seq1  TGAGTGCCAATCTTCCACTGAAGGCTTAGAAAGGATCTGGGCCTCACAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGCCAATCTTCCACTGAAGGCTTAGAAAGGATCTGGGCCTCACAGC  100

seq1  CTACCCAGCAGAAGGACAACTATTCAACTATGCTTGTAGCAGCTTTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCAGCAGAAGGACAACTATTCAACTATGCTTGTAGCAGCTTTATTT  150

seq1  GTAATAGCAAGAAACTGGAGACAACCTAGAAGTCCCTTGATTAAAGAATG  200
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GTAATAGCAAGAAACTGGAGACAACCTAAAAGTCCCTTGATTAAAGAATG  200

seq1  GATAAACAAAATGTGGTACATCTACACAATGGAGTATTACTTAGCTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAACAAAATGTGGTACATCTACACAATGGAGTATTACTTAGCTGTTT  250

seq1  AAAAAAATGACATCATGAAATTTGCAGGCAAATGGATGAAACTAGAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATGACATCATGAAATTTGCAGGCAAATGGATGAAACTAGAAAAA  300

seq1  AAATCATCCTGAGTGAGATAATCCAGACCTGGAAAGACAAGCGTGGTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATCCTGAGTGAGATAATCCAGACCTGGAAAGACAAGCGTGGTATG  350

seq1  TTCTTATTTATAAGTAGATATTAGCTATACAGTAAAGGATAATCATGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATTTATAAGTAGATATTAGCTATACAGTAAAGGATAATCATGCTA  400

seq1  CAATCCACAGACCCAGAGAGGCTAAGTAACAAGGTGGGCTCAAGGCTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCACAGACCCAGAGAGGCTAAGTAACAAGGTGGGCTCAAGGCTGGA  450

seq1  TGCATGGATCTTCCAGGGAAGGGGAAATAGAATAGATTTTGTGGGTGGAC  500
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TGCATGGATCTTCCAGGGAAGGGGAAATAAAATAGATTTTGTGGGTGGAC  500

seq1  TGGGGCAGGTGAGGATGGGAATGGGTGGGAT  531
      |||||||||||||||||||||||||||||||
seq2  TGGGGCAGGTGAGGATGGGAATGGGTGGGAT  531

seq1: chr9_73302853_73303628
seq2: B6Ng01-284F15.g_64_847 (reverse)

seq1  AAACCTCAAA-GCCCAC-CCCCAATGACACACT-CCCTCCAACAGTGCCA  47
      |||||||||| |||||| ||||||||||||||| ||||||||||||||||
seq2  AAACCTCAAAGGCCCACTCCCCAATGACACACTCCCCTCCAACAGTGCCA  50

seq1  CACCTATTCTAA--CAAGAGCACACCTTCT-AACAGTGCCACTCCCTGTG  94
      ||||||||||||   ||||||||||||||| |||||||||||||||||||
seq2  CACCTATTCTAAACAAAGAGCACACCTTCTAAACAGTGCCACTCCCTGTG  100

seq1  AGCCTATGGGAGCC-ATTTTCTTTCAAACTGCCACACCCACCCTGTCATC  143
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGCCTATGGGAGCCAATTTTCTTTCAAACTGCCACACCCACCCTGTCATC  150

seq1  TAGGGGCCTCTCTGGCCTTGGTTTTACTTTTCATTATGTTCTGTTCTTTG  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGCCTCTCTGGCCTTGGTTTTACTTTTCATTATGTTCTGTTCTTTG  200

seq1  CTATGCTCTCTGTTGTTTGTGCGAACGTCTTTGTTCTTTCATCAAAGCAT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCTCTCTGTTGTTTGTGCGAACGTCTTTGTTCTTTCATCAAAGCAT  250

seq1  CTAAATTTCTCATATATTTGATTAGAACATTGGGGCAGGGACTTATTTAC  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTTCTCATATATTTGATTAGAACATTGGGGCAGGGACTTATTTAC  300

seq1  TTTCATAGTCCCAATATGGATTTGTTCCTTGGACTTAGGAGATGCTCAAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAGTCCCAATATGGATTTGTTCCTTGGACTTAGGAGATGCTCAAT  350

seq1  AAATATTTCTTAAATAA-ATTATTAGTTTTGGCTTCAGTGTTAATTTCTC  392
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAATATTTCTTAAATAACATTATTAGTTTTGGCTTCAGTGTTAATTTCTC  400

seq1  TTTGGTGGACACAGTTTGTAAATTGATTCAGAGTTTTTGTTTGTCTGTTT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTGGACACAGTTTGTAAATTGATTCAGAGTTTTTGTTTGTCTGTTT  450

seq1  ATTTTCATGGATTTGAGTTCTGTCGTGCCAAATCTTGGTTGTTTTTCTTT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCATGGATTTGAGTTCTGTCGTGCCAAATCTTGGTTGTTTTTCTTT  500

seq1  TCTCCCAAACCTTACTGAAGCTGATGGGAGTAGTAAAGTATTTAAAATGG  542
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCAACCCTTACTGAAGCTGATGGGAGTAGTAAAGTATTTAAAATGG  550

seq1  GAATATGTCAAACTACAACTGGAGGTAACTTATTTTTCTTTCATCTTAAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGTCAAACTACAACTGGAGGTAACTTATTTTTCTTTCATCTTAAA  600

seq1  GGAAAGCCAGTGTTGATTAGCACCCATGACTAAGAAAGCCTGATTGACAG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGCCAGTGTTGATTAGCACCCATGACTAAGAAAGCCTGATTGACAG  650

seq1  CGGCTAGAAAAAGACTTTTGCTAATTGTGGCTCTCAGAAAGGATTGCCTG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTAGAAAAAGACTTTTGCTAATTGTGGCTCTCAGAAAGGATTGCCTG  700

seq1  TGTTAAGCGTTAGAACGCATTGAATGTAATACTAGACCAGTTACTGGGGT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGCGTTAGAACGCATTGAATGTAATACTAGACCAGTTACTGGGGT  750

seq1  GATGGTCTAAACACCCACTGCTTCCTGGGAATTC  776
      ||||||||||||||||||||||||||||||||||
seq2  GATGGTCTAAACACCCACTGCTTCCTGGGAATTC  784