BAC Information

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BAC

Clone NameB6Ng01-284N16
Chromosome9 (Build37)
Map Location 86,461,245 - 86,462,376
singlet/doubletsinglet
Overlap genePgm3
Upstream geneIbtk, 4933431K14Rik, EG434426, 9330154J02Rik, Tpbg, 2610018I03Rik
Downstream geneRwdd2, Mod1, Prss35, Snap91, C030002E08Rik, Cyb5r4, LOC666777, LOC244958, LOC100039510, 4922501C03Rik, LOC671706
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284N16.bB6Ng01-284N16.g
ACCGA083453GA083454
length1,126801
definitionB6Ng01-284N16.b B6Ng01-284N16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactggaaataatattttatagtccatgtgttcctcacgttcagc
accttctgcctttacgaaagcttacttttttgttttgttttgtgacattg
gattaaatgtataccctgaaacaatagttttctcttttatgcaagctctg
gcttcgtctacgtcttcttcaaaggatatgttcttattcttctcctggta
gctgggactttgtttttacccagtgtcttgttactagaaggttttgcaga
caccactctctccttaggtccataggcagcagaaatgctaagtgatttat
gtccttgagttattttaccagtagttatacaatgctttgcttgcttgtca
ggtagatgagtaatctgttctgactttatagaatgaaaaccaggttctat
gcactcaggagttttaagacccccatatgcctacactgtgtgcattcagt
attgattgttattattatctaagatgcatgctgctatagtcaaactaggt
gcaagttatatcctttatatcttttaaaatattcttattattgcttattt
atgtgtgtgtctgtgtgtctgtgtggatgtggatttgctagacaaggtca
ggtgtttcatcagatgtctttgagcttgcgttacaagcagttgtgctgcc
catgtgggtgctggggattgaactcagatcctctgtaagagccttctcct
caagccctattgtatacccccacccctttcttgtttttctttccagcact
gggtattaaagtcagggcctcgtgtatgctaggaaaacacacttctactc
agctatagtcctggccccctttttaattctgatacattttcacaaattac
ccaagctggccttgaactctgtattgaaagtaggtcacgaacctagtgat
cctcgtgcgtcagcttcaattagaggtctgcatcattgtacctgactggc
tctctgtagtctgtaaatttgaaagccaagatttttctaagaaatcaccc
atatatgcaaaggcaccatgcgaatgtatatttacctgtggttttgtttg
gtttgtttgttgttgttttggtcagagtgctagcttcagaatacaatgaa
cctgtaattatttggaaattctcagc
gaattctttgtttagctctgtgccccattttttaatggggttatttgatt
tttctggagtccatcttcatgagttctttatatatattggatattagtcc
cctatccgatttgggataggtaaagatcctttcccaatctgttggtggcc
tttttgtcttattgacagtgtcttttcccttacagaagcttagcaatttt
atgaggcccagaaacttagaatacccaagatacaatttgcaaaacacacg
aaactcaagaagaacgaagaccagagtgtggacacttcgccccttcttag
aattgggaacaaaacactgacggaaggagttacagagacaaagtttggag
ctgagacgaaaggatggaccatccagagactgccacaccgggggatccac
cccataatcagccaccaaacgcagacactattgaatacaccagcaagatt
ttgctgaaaggaccctgatatagctgtctcctgtgaggctatgtcagtgc
ctggcaaacacagaagtggatgctcacagtcagctattggatggaataca
gggcccccaatggaggagctagagaaagtacccaaggagctaaagggctc
tgcaaccctataggtggaacaacaatatgaactaacctgtacccccagag
ctcgtatctctggctgcattatgtagcagaagacggcctagtcagccatc
attgggaagagaggccccttggtcttgcaaactttatatgccccagtaca
ggggaatgccagggccaagaagtaggattgggtgggtaggggagcagggt
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_86461245_86462376
seq2: B6Ng01-284N16.b_50_1175 (reverse)

seq1  GCTGAGAATTTCAAAATAATAACAGGTTCATGGTA-TCTGAAAGCTAGCA  49
      |||||||||||| ||||||| |||||||||| ||| |||| |||||||| 
seq2  GCTGAGAATTTCCAAATAATTACAGGTTCATTGTATTCTG-AAGCTAGC-  48

seq1  ACTCTGACAAAAACAAACAAACAAACAAA-CAAACAAAAACCCACAGGTA  98
      |||||||| |||||||   |||||||||| |||||||||  |||||||||
seq2  ACTCTGACCAAAACAA--CAACAAACAAACCAAACAAAA--CCACAGGTA  94

seq1  AATTATAACATTCGCATGGGTGCCTTTGCATATATGGGTGATTTCTTAGA  148
      || ||| |||||||||| ||||||||||||||||||||||||||||||||
seq2  AA-TAT-ACATTCGCAT-GGTGCCTTTGCATATATGGGTGATTTCTTAGA  141

seq1  AAATTC-TGGCTTTCAAATTTACAGACTACAGAGAGCCAGTCAGGTACAA  197
      ||| || |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTTGGCTTTCAAATTTACAGACTACAGAGAGCCAGTCAGGTACAA  191

seq1  TGATGCAGACCTCTAATTGAAGCTGACGCACGAGGATCACTAGGTTCGTG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCAGACCTCTAATTGAAGCTGACGCACGAGGATCACTAGGTTCGTG  241

seq1  ACCTACTTTCAATACAGAGTTCAAGGCCAGCTTGGGTAATTTGTGAAAAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTTTCAATACAGAGTTCAAGGCCAGCTTGGGTAATTTGTGAAAAT  291

seq1  GTATCAGAATTAAAAAGGGGGCCAGGACTATAGCTGAGTAGAAGTGTGTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAGAATTAAAAAGGGGGCCAGGACTATAGCTGAGTAGAAGTGTGTT  341

seq1  TTCCTAGCATACACGAGGCCCTGACTTTAATACCCAGTGCTGGAAAGAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGCATACACGAGGCCCTGACTTTAATACCCAGTGCTGGAAAGAAA  391

seq1  AACAAGAAAGGGGTGGGGGTATACAATAGGGCTTGAGGAGAAGGCTCTTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAAAGGGGTGGGGGTATACAATAGGGCTTGAGGAGAAGGCTCTTA  441

seq1  CAGAGGATCTGAGTTCAATCCCCAGCACCCACATGGGCAGCACAACTGCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGATCTGAGTTCAATCCCCAGCACCCACATGGGCAGCACAACTGCT  491

seq1  TGTAACGCAAGCTCAAAGACATCTGATGAAACACCTGACCTTGTCTAGCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACGCAAGCTCAAAGACATCTGATGAAACACCTGACCTTGTCTAGCA  541

seq1  AATCCACATCCACACAGACACACAGACACACACATAAATAAGCAATAATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCACATCCACACAGACACACAGACACACACATAAATAAGCAATAATA  591

seq1  AGAATATTTTAAAAGATATAAAGGATATAACTTGCACCTAGTTTGACTAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATATTTTAAAAGATATAAAGGATATAACTTGCACCTAGTTTGACTAT  641

seq1  AGCAGCATGCATCTTAGATAATAATAACAATCAATACTGAATGCACACAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCATGCATCTTAGATAATAATAACAATCAATACTGAATGCACACAG  691

seq1  TGTAGGCATATGGGGGTCTTAAAACTCCTGAGTGCATAGAACCTGGTTTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGCATATGGGGGTCTTAAAACTCCTGAGTGCATAGAACCTGGTTTT  741

seq1  CATTCTATAAAGTCAGAACAGATTACTCATCTACCTGACAAGCAAGCAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTATAAAGTCAGAACAGATTACTCATCTACCTGACAAGCAAGCAAA  791

seq1  GCATTGTATAACTACTGGTAAAATAACTCAAGGACATAAATCACTTAGCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTATAACTACTGGTAAAATAACTCAAGGACATAAATCACTTAGCA  841

seq1  TTTCTGCTGCCTATGGACCTAAGGAGAGAGTGGTGTCTGCAAAACCTTCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTGCCTATGGACCTAAGGAGAGAGTGGTGTCTGCAAAACCTTCT  891

seq1  AGTAACAAGACACTGGGTAAAAACAAAGTCCCAGCTACCAGGAGAAGAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACAAGACACTGGGTAAAAACAAAGTCCCAGCTACCAGGAGAAGAAT  941

seq1  AAGAACATATCCTTTGAAGAAGACGTAGACGAAGCCAGAGCTTGCATAAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACATATCCTTTGAAGAAGACGTAGACGAAGCCAGAGCTTGCATAAA  991

seq1  AGAGAAAACTATTGTTTCAGGGTATACATTTAATCCAATGTCACAAAACA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAACTATTGTTTCAGGGTATACATTTAATCCAATGTCACAAAACA  1041

seq1  AAACAAAAAAGTAAGCTTTCGTAAAGGCAGAAGGTGCTGAACGTGAGGAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAAAGTAAGCTTTCGTAAAGGCAGAAGGTGCTGAACGTGAGGAA  1091

seq1  CACATGGACTATAAAATATTATTTCCAGTGAATTC  1132
      |||||||||||||||||||||||||||||||||||
seq2  CACATGGACTATAAAATATTATTTCCAGTGAATTC  1126