BAC Information

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BAC

Clone NameB6Ng01-285K21
Chromosome13 (Build37)9 (Build37)
Map Location 71,008,336 - 71,008,42625,591,905 - 25,593,029
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG620143, LOC100042291, 4930520P13Rik, EG633042, BC018507, EG620473, Adamts16
Downstream gene8030423J24Rik, LOC627230, LOC100042360
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285K21.bB6Ng01-285K21.g
ACCGA084067GA084068
length951,127
definitionB6Ng01-285K21.b B6Ng01-285K21.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(71,008,336 - 71,008,426)(25,591,905 - 25,593,029)
sequence
tacaagtctgataaagttagatttagacctttttttttttttctactctt
tcatgattccttaaattgttacaaagaggaagaggaggaggagga

gaattctattagaattggatgaatcatctcccttctacctttggataatc
ctttattgcactgatagtagggacattttagaagtgaaaaagaaagagaa
aaaggagctacaggcaatgacgaaaagaactagaaaaagtatgtagaaga
agagaagcaaaaaagaagataaatagagaaagatgatagaatgaagtaga
ctgggttagagttggagccactgcatcaaatttatgtatagactaataat
tttttttcagtttatgactatggtgcatggcactatggtactaaaatcaa
ggttccaacaggacttggttctggtgaggatatatttctggttttgaact
gttgacttttactttgtatccttatatggcaagcatcagatatgagagtg
tattgcttcccagtttctgtgaccaaatgcctaacaagaagcaacttata
ggagacaaggtttatttctgcttaagggtggaggcaatacagcccatcat
gctggtgacttcccgatggctggagagtgaggcagttgctcacattacat
ctgtagtcaagaaggagagagaggagaactcgggcttaattcgctatctc
agttttattcagtttgtgacctcagtttgtggaatgattctgcccatatg
cagagtttatcatccttcttagttaaaactttctggaaatgcactcacaa
acacatggtcctaaatcccatcaactcagttactaagatccaccaggcca
gagaggatttcaacacaggatttttttttcctattttttctttttattgg
aattttctttatttacaattcatatgttatcccccctcctgggtttccct
tcctccctcccagaaacaccctatcacatcctccctccccctgattctat
gagggtgttcctccacccacccacccactcccacctccctactcttgatt
cccctatactggggcatctatcgaagccctgatagggccaagcacctcac
ctcccaatgatgcatgacaaggacatcttttgttaacatatgcagctgga
gccatgtgtacctcctttgtgatgcctttagtcctgggagtcctagcctg
gggaggacaggaatcgggttgtgttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_71008336_71008426
seq2: B6Ng01-285K21.b_77_144

seq1  CCTTTTTTTTTTTTTCTTATTGTGCTGAGATGTAACATATACCTAGTAGC  50
      |||||||||||||||||  |    ||   |||      || |||      
seq2  CCTTTTTTTTTTTTTCTACT----CTTTCATG------ATTCCT-----T  35

seq1  AAAATGAAAAAGAAGAAGAAAGAGGAAGAGGAGGAGGAGGA  91
      ||| ||          | |||||||||||||||||||||||
seq2  AAATTG--------TTACAAAGAGGAAGAGGAGGAGGAGGA  68


seq1: chr9_25591905_25593029
seq2: B6Ng01-285K21.g_70_1196

seq1  GAATTCTATTAGAATTGGATGAATCATCTCCCTTCTACCTTTGGATAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTAGAATTGGATGAATCATCTCCCTTCTACCTTTGGATAATC  50

seq1  CTTTATTGCACTGATAGTAGGGACATTTTAGAAGTGAAAAAGAAAGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTGCACTGATAGTAGGGACATTTTAGAAGTGAAAAAGAAAGAGAA  100

seq1  AAAGGAGCTACAGGCAATGACGAAAAGAACTAGAAAAAGTATGTAGAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGCTACAGGCAATGACGAAAAGAACTAGAAAAAGTATGTAGAAGA  150

seq1  AGAGAAGCAAAAAAGAAGATAAATAGAGAAAGATGATAGAATGAAGTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGCAAAAAAGAAGATAAATAGAGAAAGATGATAGAATGAAGTAGA  200

seq1  CTGGGTTAGAGTTGGAGCCACTGCATCAAATTTATGTATAGACTAATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTAGAGTTGGAGCCACTGCATCAAATTTATGTATAGACTAATAAT  250

seq1  TTTTTTTCAGTTTATGACTATGGTGCATGGCACTATGGTACTAAAATCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCAGTTTATGACTATGGTGCATGGCACTATGGTACTAAAATCAA  300

seq1  GGTTCCAACAGGACTTGGTTCTGGTGAGGATATATTTCTGGTTTTGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCAACAGGACTTGGTTCTGGTGAGGATATATTTCTGGTTTTGAACT  350

seq1  GTTGACTTTTACTTTGTATCCTTATATGGCAAGCATCAGATATGAGAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACTTTTACTTTGTATCCTTATATGGCAAGCATCAGATATGAGAGTG  400

seq1  TATTGCTTCCCAGTTTCTGTGACCAAATGCCTAACAAGAAGCAACTTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTTCCCAGTTTCTGTGACCAAATGCCTAACAAGAAGCAACTTATA  450

seq1  GGAGACAAGGTTTATTTCTGCTTAAGGGTGGAGGCAATACAGCCCATCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACAAGGTTTATTTCTGCTTAAGGGTGGAGGCAATACAGCCCATCAT  500

seq1  GCTGGTGACTTCCCGATGGCTGGAGAGTGAGGCAGTTGCTCACATTACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGACTTCCCGATGGCTGGAGAGTGAGGCAGTTGCTCACATTACAT  550

seq1  CTGTAGTCAAGAAGGAGAGAGAGGAGAACTCGGGCTTAATTCGCTATCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTCAAGAAGGAGAGAGAGGAGAACTCGGGCTTAATTCGCTATCTC  600

seq1  AGTTTTATTCAGTTTGTGACCTCAGTTTGTGGAATGATTCTGCCCATATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTATTCAGTTTGTGACCTCAGTTTGTGGAATGATTCTGCCCATATG  650

seq1  CAGAGTTTATCATCCTTCTTAGTTAAAACTTTCTGGAAATGCACTCACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTTATCATCCTTCTTAGTTAAAACTTTCTGGAAATGCACTCACAA  700

seq1  ACACATGGTCCTAAATCCCATCAACTCAGTTACTAAGATCCACCAGGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGGTCCTAAATCCCATCAACTCAGTTACTAAGATCCACCAGGCCA  750

seq1  GAGAGGATTTCAACACAGGA-TTTTTTTTCCTATTTTTTCTTTTTATTGG  799
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAGAGGATTTCAACACAGGATTTTTTTTTCCTATTTTTTCTTTTTATTGG  800

seq1  AATTTTCTTTATTTACAATTCATATGTTATCCCCCCTCCT-GGTTTCCCT  848
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AATTTTCTTTATTTACAATTCATATGTTATCCCCCCTCCTGGGTTTCCCT  850

seq1  TCCTCCCTCCCAGAAACACCCTATCACATCCTCCCTCCCCCTGATTCTAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCTCCCAGAAACACCCTATCACATCCTCCCTCCCCCTGATTCTAT  900

seq1  GAGGGTGTTCCTCCACCCACCCACCCACTCCCACCTCCCTACTCTTGATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTGTTCCTCCACCCACCCACCCACTCCCACCTCCCTACTCTTGATT  950

seq1  CCCCTATACTGGGGCATCTATCG-AGCCTTGATAGGGCCAAGCACCTCAC  997
      ||||||||||||||||||||||| |||| |||||||||||||||||||||
seq2  CCCCTATACTGGGGCATCTATCGAAGCCCTGATAGGGCCAAGCACCTCAC  1000

seq1  CTCCCATTGATGCATGACAAGGACATCTTTTGTT-ACATATGCAGCTGGA  1046
      |||||| ||||||||||||||||||||||||||| |||||||||||||||
seq2  CTCCCAATGATGCATGACAAGGACATCTTTTGTTAACATATGCAGCTGGA  1050

seq1  GCCATGTGTA-CTCCTTTGTTGATG-CTTTAGTCCCTGGGAGTTCTAG-C  1093
      |||||||||| |||||||| ||||| ||||||| ||||||||| |||| |
seq2  GCCATGTGTACCTCCTTTG-TGATGCCTTTAGT-CCTGGGAGTCCTAGCC  1098

seq1  TGGGGAGGGACAGGGATCGGGTTGGTTGTTAT  1125
      |||||| ||||||| |||||||||  ||||||
seq2  TGGGGA-GGACAGGAATCGGGTTG--TGTTAT  1127


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