BAC Information

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BAC

Clone NameB6Ng01-286G22
Chromosome9 (Build37)
Map Location 89,291,854 - 89,415,285
singlet/doubletdoublet
Overlap genenone
Upstream geneSnx14, Syncrip, 2810026P18Rik, 4930422I07Rik, EG547109, LOC100039707, LOC100039721, Bcl2a1d, LOC100039674, EG666731, LOC100039741, Bcl2a1a, LOC100039689, EG666747, LOC100039714, 4930579C12Rik, Bcl2a1b, Mthfs
Downstream geneAF529169, Tmed3, B230218L05Rik, Rasgrf1, Ctsh, Morf4l1, LOC621414, Adamts7, Tbc1d2b, LOC100039777
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286G22.bB6Ng01-286G22.g
ACCGA084629GA084630
length668422
definitionB6Ng01-286G22.b B6Ng01-286G22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,291,854 - 89,292,521)(89,414,858 - 89,415,285)
sequence
gaattctccaatctcctgcacacttatcaagaactttatatccagagaca
tgcctagtcatttctgagatatcagtcatgccacagaaaagtatgatggg
acatttgtgaggtgaagggaccagacaaatgactattttattctagcctt
caagatgagattatattcttagtatgaaggaggcaaattttctttccctc
ttgcttattataggaggagaggtgcttgggactgagaattaaattgatac
aacagttcaggataataaagacattcaaatgtacttaatgagtcttacat
gccacagtgaccttcataaggaaataaagacccagaaagccagttaaaag
gtgaatacttgtattctgtattagacaaaacatagaaagttgtgatgagg
caaacaggctttgtctagggtagttcatcatgtgaagaagatgactggaa
agatatggcttggcacaacaagttttgtttgtgaaattttcctttggcta
caactttatactttccttgtggtctagagaatatttcacatagaaatgtt
atcacttgttttgaagaaaaggaagaacaaggaggaggcagggggaagaa
gtaggaggaggagaaggagaaaatgaagaagaaaaagaagagaaggagga
gggatgaagaaggagaag
tgagcatgtgaacttgtacctttaaaaaagcacaatggtttccttggggg
aaggaacaaacacatctccttacaagaatctcccacagaccattaaaaaa
gagatctctgttttaagaagtctgtctcagtcctgctgttgctatgcaca
ccacaggcaggaccttaagatgtcttctataaaagcaatggtgctctata
gcagcagggggctgtaaatgcttgtgctttcacctgagaagagggaacct
taactaaaacagtacctcaatcagattggcccagggccacctttgtaagg
aattgtctttattgatggttggtacaggggggtgtggtggtttgaatgtg
cttggtctaggatgtggcactattagggggtgtggtcttctttgggggag
tgtgtctccgaggaggtgggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_89291854_89292521
seq2: B6Ng01-286G22.b_43_710

seq1  GAATTCTCCAATCTCCTGCACACTTATCAAGAACTTTATATCCAGAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAATCTCCTGCACACTTATCAAGAACTTTATATCCAGAGACA  50

seq1  TGCCTAGTCATTTCTGAGATATCAGTCATGCCACAGAAAAGTATGATGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGTCATTTCTGAGATATCAGTCATGCCACAGAAAAGTATGATGGG  100

seq1  ACATTTGTGAGGTGAAGGGACCAGACAAATGACTATTTTATTCTAGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGTGAGGTGAAGGGACCAGACAAATGACTATTTTATTCTAGCCTT  150

seq1  CAAGATGAGATTATATTCTTAGTATGAAGGAGGCAAATTTTCTTTCCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGAGATTATATTCTTAGTATGAAGGAGGCAAATTTTCTTTCCCTC  200

seq1  TTGCTTATTATAGGAGGAGAGGTGCTTGGGACTGAGAATTAAATTGATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTATTATAGGAGGAGAGGTGCTTGGGACTGAGAATTAAATTGATAC  250

seq1  AACAGTTCAGGATAATAAAGACATTCAAATGTACTTAATGAGTCTTACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTCAGGATAATAAAGACATTCAAATGTACTTAATGAGTCTTACAT  300

seq1  GCCACAGTGACCTTCATAAGGAAATAAAGACCCAGAAAGCCAGTTAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAGTGACCTTCATAAGGAAATAAAGACCCAGAAAGCCAGTTAAAAG  350

seq1  GTGAATACTTGTATTCTGTATTAGACAAAACATAGAAAGTTGTGATGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATACTTGTATTCTGTATTAGACAAAACATAGAAAGTTGTGATGAGG  400

seq1  CAAACAGGCTTTGTCTAGGGTAGTTCATCATGTGAAGAAGATGACTGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGGCTTTGTCTAGGGTAGTTCATCATGTGAAGAAGATGACTGGAA  450

seq1  AGATATGGCTTGGCACAACAAGTTTTGTTTGTGAAATTTTCCTTTGGCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGGCTTGGCACAACAAGTTTTGTTTGTGAAATTTTCCTTTGGCTA  500

seq1  CAACTTTATACTTTCCTTGTGGTCTAGAGAATATTTCACATAGAAATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTATACTTTCCTTGTGGTCTAGAGAATATTTCACATAGAAATGTT  550

seq1  ATCACTTGTTTTGAAGAAAAGGAAGAACAAGGAGGAGGCAGGGGGAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTTGTTTTGAAGAAAAGGAAGAACAAGGAGGAGGCAGGGGGAAGAA  600

seq1  GTAGGAGGAGGAGAAGGAGAAAATGAAGAAGAAAAAGAAGAGAAGGAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAGGAGGAGAAGGAGAAAATGAAGAAGAAAAAGAAGAGAAGGAGGA  650

seq1  GGGATGAAGAAGGAGAAG  668
      ||||||||||||||||||
seq2  GGGATGAAGAAGGAGAAG  668

seq1: chr9_89414858_89415285
seq2: B6Ng01-286G22.g_69_496 (reverse)

seq1  AGCCCACCTCCACAGAGACACACTCCCCCAAAGAAGGCCACACCCCCTAA  50
      ||||||||||| | |||||||||||||||||||||| |||||||||||||
seq2  AGCCCACCTCCTCGGAGACACACTCCCCCAAAGAAGACCACACCCCCTAA  50

seq1  TAGTGCCACTTCCTAGACCAAGCACATTCAAACCACCACACCCCCCTGTA  100
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCCACATCCTAGACCAAGCACATTCAAACCACCACACCCCCCTGTA  100

seq1  CCAACCATCAATAAAGACAATTCCTTACAAAGGTGGCCCTGGGCCAATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCATCAATAAAGACAATTCCTTACAAAGGTGGCCCTGGGCCAATCT  150

seq1  GATTGAGGTACTGTTTTAGTTAAGGTTCCCTCTTCTCAGGTGAAAGCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGAGGTACTGTTTTAGTTAAGGTTCCCTCTTCTCAGGTGAAAGCACA  200

seq1  AGCATTTACAGCCCCCTGCTGCTATAGAGCACCATTGCTTTTATAGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTACAGCCCCCTGCTGCTATAGAGCACCATTGCTTTTATAGAAGA  250

seq1  CATCTTAAGGTCCTGCCTGTGGTGTGCATAGCAACAGCAGGACTGAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTAAGGTCCTGCCTGTGGTGTGCATAGCAACAGCAGGACTGAGACA  300

seq1  GACTTCTTAAAACAGAGATCTCTTTTTTAATGGTCTGTGGGAGATTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTTAAAACAGAGATCTCTTTTTTAATGGTCTGTGGGAGATTCTTG  350

seq1  TAAGGAGATGTGTTTGTTCCTTCCCCCAAGGAAACCATTGTGCTTTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGATGTGTTTGTTCCTTCCCCCAAGGAAACCATTGTGCTTTTTTA  400

seq1  AAGGTACAAGTTCACATGCTCAGAATTC  428
      ||||||||||||||||||||||||||||
seq2  AAGGTACAAGTTCACATGCTCAGAATTC  428